RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 CRPP02741 224 aa12.02□□□□□ -0.49
SEMA3B-201ENST00000416295 RBX1P62877 108 aa12.02□□□□□ -0.49
SEMA3B-201ENST00000416295 FAM104BQ5XKR9 115 aa12.02□□□□□ -0.49
SEMA3B-201ENST00000416295 MRPL54Q6P161 138 aaKnown RBP12.02□□□□□ -0.49
SEMA3B-201ENST00000416295 COMMD7Q86VX2 200 aa12.02□□□□□ -0.49
SEMA3B-201ENST00000416295 Q8N976 141 aa12.02□□□□□ -0.49
SEMA3B-201ENST00000416295 PCLOQ9Y6V0 5065 aa12.01□□□□□ -0.49
SEMA3B-201ENST00000416295 UBE2L6O14933 153 aa12.01□□□□□ -0.49
SEMA3B-201ENST00000416295 KRTAP10-2P60368 255 aa12.01□□□□□ -0.49
SEMA3B-201ENST00000416295 ATP5L2Q7Z4Y8 100 aa12.01□□□□□ -0.49
SEMA3B-201ENST00000416295 DNAH11Q96DT5 4516 aa12.01□□□□□ -0.49
SEMA3B-201ENST00000416295 A0A1B0GXF2 115 aa12□□□□□ -0.49
SEMA3B-201ENST00000416295 I3L3M4 83 aa12□□□□□ -0.49
SEMA3B-201ENST00000416295 GAS8-AS1O95177 125 aa12□□□□□ -0.49
SEMA3B-201ENST00000416295 ADCYAP1P18509 176 aa12□□□□□ -0.49
SEMA3B-201ENST00000416295 PMCHP20382 165 aa12□□□□□ -0.49
SEMA3B-201ENST00000416295 CDPF1Q6NVV7 123 aa12□□□□□ -0.49
SEMA3B-201ENST00000416295 DEFB104AQ8WTQ1 72 aa12□□□□□ -0.49
SEMA3B-201ENST00000416295 PGPEP1Q9NXJ5 209 aa12□□□□□ -0.49
SEMA3B-201ENST00000416295 IGKV2D-24A0A075B6R9 120 aa11.99□□□□□ -0.49
SEMA3B-201ENST00000416295 LRCOL1A6NCL2 159 aa11.99□□□□□ -0.49
SEMA3B-201ENST00000416295 APCSP02743 223 aa11.99□□□□□ -0.49
SEMA3B-201ENST00000416295 RPS10P46783 165 aaKnown RBP11.99□□□□□ -0.49
SEMA3B-201ENST00000416295 TMEM70Q9BUB7 260 aa11.99□□□□□ -0.49
SEMA3B-201ENST00000416295 SEC11CQ9BY50 192 aa11.99□□□□□ -0.49
SEMA3B-201ENST00000416295 A0A1B0GUV1 79 aa11.98□□□□□ -0.49
SEMA3B-201ENST00000416295 LINC00862A6NCI5 91 aa11.98□□□□□ -0.49
SEMA3B-201ENST00000416295 MIAQ16674 131 aa11.98□□□□□ -0.49
SEMA3B-201ENST00000416295 MRPL51Q4U2R6 128 aaKnown RBP11.98□□□□□ -0.49
SEMA3B-201ENST00000416295 ENHOQ6UWT2 76 aa11.98□□□□□ -0.49
SEMA3B-201ENST00000416295 C1orf43Q9BWL3 253 aa11.98□□□□□ -0.49
SEMA3B-201ENST00000416295 DYNC1H1Q14204 4646 aaKnown RBP11.97□□□□□ -0.49
SEMA3B-201ENST00000416295 SMKR1H3BMG3 65 aa11.97□□□□□ -0.49
SEMA3B-201ENST00000416295 POLR2KP53803 58 aaKnown RBP11.97□□□□□ -0.49
SEMA3B-201ENST00000416295 PRR34Q9NV39 138 aa11.97□□□□□ -0.49
SEMA3B-201ENST00000416295 TRBV27A0A0K0K1C4 114 aa11.96□□□□□ -0.49
SEMA3B-201ENST00000416295 H7C423 109 aa11.96□□□□□ -0.49
SEMA3B-201ENST00000416295 CKS2P33552 79 aa11.96□□□□□ -0.49
SEMA3B-201ENST00000416295 SUMO2P61956 95 aaKnown RBP11.96□□□□□ -0.49
SEMA3B-201ENST00000416295 LINC00269Q8N2A0 174 aa11.96□□□□□ -0.49
SEMA3B-201ENST00000416295 NRACQ8N912 160 aa11.96□□□□□ -0.49
SEMA3B-201ENST00000416295 VCYO14598 125 aa11.95□□□□□ -0.5
SEMA3B-201ENST00000416295 Q8N814 137 aa11.95□□□□□ -0.5
SEMA3B-201ENST00000416295 C20orf203Q8NBC4 194 aa11.95□□□□□ -0.5
SEMA3B-201ENST00000416295 BTF3L4Q96K17 158 aa11.95□□□□□ -0.5
SEMA3B-201ENST00000416295 IMMP2LQ96T52 175 aa11.95□□□□□ -0.5
SEMA3B-201ENST00000416295 CTDSP1Q9GZU7 261 aa11.95□□□□□ -0.5
SEMA3B-201ENST00000416295 TMEM242Q9NWH2 141 aa11.95□□□□□ -0.5
SEMA3B-201ENST00000416295 TSHBP01222 138 aa11.94□□□□□ -0.5
SEMA3B-201ENST00000416295 PPBPP02775 128 aa11.94□□□□□ -0.5
SEMA3B-201ENST00000416295 REG3AQ06141 175 aa11.94□□□□□ -0.5
SEMA3B-201ENST00000416295 AMMECR1LQ6DCA0 310 aa11.94□□□□□ -0.5
SEMA3B-201ENST00000416295 CLPSL2Q6UWE3 100 aa11.94□□□□□ -0.5
SEMA3B-201ENST00000416295 NTN5Q8WTR8 489 aaPredicted RBP11.94□□□□□ -0.5
SEMA3B-201ENST00000416295 C20orf78Q9BR46 151 aa11.94□□□□□ -0.5
SEMA3B-201ENST00000416295 IGLV4-60A0A075B6I1 120 aa11.93□□□□□ -0.5
SEMA3B-201ENST00000416295 TRBV24-1A0A075B6N3 115 aa11.93□□□□□ -0.5
SEMA3B-201ENST00000416295 MAPKAPK5-AS1Q8N8E1 139 aa11.93□□□□□ -0.5
SEMA3B-201ENST00000416295 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.92□□□□□ -0.5
SEMA3B-201ENST00000416295 IGKV2-29A2NJV5 120 aaPredicted RBP11.92□□□□□ -0.5
SEMA3B-201ENST00000416295 D6R8Y8 96 aa11.92□□□□□ -0.5
SEMA3B-201ENST00000416295 CDK2AP2O75956 126 aa11.92□□□□□ -0.5
SEMA3B-201ENST00000416295 ZNF25P17030 456 aaPredicted RBP11.92□□□□□ -0.5
SEMA3B-201ENST00000416295 FCER1GP30273 86 aa11.92□□□□□ -0.5
SEMA3B-201ENST00000416295 BAALCQ8WXS3 180 aa11.92□□□□□ -0.5
SEMA3B-201ENST00000416295 KIR2DL4Q99706 377 aa11.92□□□□□ -0.5
SEMA3B-201ENST00000416295 TRAV8-4A0A0B4J246 113 aa11.91□□□□□ -0.5
SEMA3B-201ENST00000416295 LECT2O14960 151 aa11.91□□□□□ -0.5
SEMA3B-201ENST00000416295 TNFRSF6BO95407 300 aa11.91□□□□□ -0.5
SEMA3B-201ENST00000416295 FGF6P10767 208 aa11.91□□□□□ -0.5
SEMA3B-201ENST00000416295 ESDP10768 282 aa11.91□□□□□ -0.5
SEMA3B-201ENST00000416295 RPL32P62910 135 aaKnown RBP11.91□□□□□ -0.5
SEMA3B-201ENST00000416295 C10orf91Q5T1B1 145 aa11.91□□□□□ -0.5
SEMA3B-201ENST00000416295 RNASEKQ6P5S7 137 aaKnown RBP11.91□□□□□ -0.5
SEMA3B-201ENST00000416295 IGLV5-52A0A0A0MRZ9 124 aa11.9□□□□□ -0.5
SEMA3B-201ENST00000416295 C7orf77A4D0Y5 90 aa11.9□□□□□ -0.5
SEMA3B-201ENST00000416295 PHOX2AO14813 284 aa11.9□□□□□ -0.5
SEMA3B-201ENST00000416295 FUSP35637 526 aaKnown RBP eCLIP11.9□□□□□ -0.5
SEMA3B-201ENST00000416295 WFDC2Q14508 124 aa11.9□□□□□ -0.5
SEMA3B-201ENST00000416295 ORMDL3Q8N138 153 aa11.9□□□□□ -0.5
SEMA3B-201ENST00000416295 CARHSP1Q9Y2V2 147 aaKnown RBP11.9□□□□□ -0.5
SEMA3B-201ENST00000416295 TRAV9-1A0A075B6T8 112 aa11.89□□□□□ -0.51
SEMA3B-201ENST00000416295 TCAPO15273 167 aa11.89□□□□□ -0.51
SEMA3B-201ENST00000416295 RYR1P21817 5038 aa11.88□□□□□ -0.51
SEMA3B-201ENST00000416295 HLA-DQA1P01909 254 aa11.88□□□□□ -0.51
SEMA3B-201ENST00000416295 S100PP25815 95 aa11.88□□□□□ -0.51
SEMA3B-201ENST00000416295 TMEM136Q6ZRR5 245 aa11.88□□□□□ -0.51
SEMA3B-201ENST00000416295 TMEM101Q96IK0 257 aa11.88□□□□□ -0.51
SEMA3B-201ENST00000416295 SMIM2Q9BVW6 85 aa11.88□□□□□ -0.51
SEMA3B-201ENST00000416295 NPYP01303 97 aa11.87□□□□□ -0.51
SEMA3B-201ENST00000416295 GCSHP23434 173 aa11.87□□□□□ -0.51
SEMA3B-201ENST00000416295 SMAGPQ0VAQ4 97 aa11.87□□□□□ -0.51
SEMA3B-201ENST00000416295 RHEBQ15382 184 aa11.87□□□□□ -0.51
SEMA3B-201ENST00000416295 C14orf177Q52M58 125 aa11.87□□□□□ -0.51
SEMA3B-201ENST00000416295 PRELID3AQ96N28 172 aa11.87□□□□□ -0.51
SEMA3B-201ENST00000416295 LAMTOR2Q9Y2Q5 125 aa11.87□□□□□ -0.51
SEMA3B-201ENST00000416295 IGLV10-54A0A075B6I4 117 aa11.86□□□□□ -0.51
SEMA3B-201ENST00000416295 MRPL52Q86TS9 123 aaKnown RBP11.86□□□□□ -0.51
SEMA3B-201ENST00000416295 OR5A1Q8NGJ0 315 aa11.86□□□□□ -0.51
SEMA3B-201ENST00000416295 KRTAP26-1Q6PEX3 210 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms