RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 MGST1P10620 155 aaKnown RBP6□□□□□ -1.45
LINC01238-201ENST00000416204 GNG5P63218 68 aa6□□□□□ -1.45
LINC01238-201ENST00000416204 CT83Q5H943 113 aa6□□□□□ -1.45
LINC01238-201ENST00000416204 DNLZQ5SXM8 178 aa6□□□□□ -1.45
LINC01238-201ENST00000416204 Q6ZRU5 148 aa6□□□□□ -1.45
LINC01238-201ENST00000416204 NIT1Q86X76 327 aa6□□□□□ -1.45
LINC01238-201ENST00000416204 HIST3H2BBQ8N257 126 aa6□□□□□ -1.45
LINC01238-201ENST00000416204 C12orf57Q99622 126 aa6□□□□□ -1.45
LINC01238-201ENST00000416204 GNB1LQ9BYB4 327 aa6□□□□□ -1.45
LINC01238-201ENST00000416204 JPT2Q9H910 190 aa6□□□□□ -1.45
LINC01238-201ENST00000416204 FAM231BA6NCW3 169 aa5.99□□□□□ -1.45
LINC01238-201ENST00000416204 USP17L23D6RBM5 183 aa5.99□□□□□ -1.45
LINC01238-201ENST00000416204 HLA-DQA1P01909 254 aa5.99□□□□□ -1.45
LINC01238-201ENST00000416204 PRSS1P07477 247 aa5.99□□□□□ -1.45
LINC01238-201ENST00000416204 ZNF80P51504 273 aaPredicted RBP5.99□□□□□ -1.45
LINC01238-201ENST00000416204 S100A12P80511 92 aa5.99□□□□□ -1.45
LINC01238-201ENST00000416204 MLST8Q9BVC4 326 aa5.99□□□□□ -1.45
LINC01238-201ENST00000416204 DPH3P1Q9H4G8 78 aa5.99□□□□□ -1.45
LINC01238-201ENST00000416204 ZFP30Q9Y2G7 519 aa5.99□□□□□ -1.45
LINC01238-201ENST00000416204 A0A087WX48 190 aa5.98□□□□□ -1.45
LINC01238-201ENST00000416204 XKRY2A2RUG3 117 aa5.98□□□□□ -1.45
LINC01238-201ENST00000416204 A8MWL6 223 aa5.98□□□□□ -1.45
LINC01238-201ENST00000416204 ATP5L2Q7Z4Y8 100 aa5.98□□□□□ -1.45
LINC01238-201ENST00000416204 KCNS1Q96KK3 526 aa5.98□□□□□ -1.45
LINC01238-201ENST00000416204 LINC00479Q96M42 142 aa5.98□□□□□ -1.45
LINC01238-201ENST00000416204 GFRA4Q9GZZ7 299 aa5.98□□□□□ -1.45
LINC01238-201ENST00000416204 RNASE7Q9H1E1 156 aaKnown RBP5.98□□□□□ -1.45
LINC01238-201ENST00000416204 NAT8BQ9UHF3 227 aa5.98□□□□□ -1.45
LINC01238-201ENST00000416204 LENEPQ9Y5L5 61 aa5.98□□□□□ -1.45
LINC01238-201ENST00000416204 MUC2Q02817 5179 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 TRAV34A0A0B4J273 112 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 TMEM262E9PQX1 116 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 CHTF8P0CG12 524 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 C14orf177Q52M58 125 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 ENHOQ6UWT2 76 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 Q86TA4 180 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 NUDT10Q8NFP7 164 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 TSKUQ8WUA8 353 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 DPH3Q96FX2 82 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 NUDT11Q96G61 164 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 ZC2HC1AQ96GY0 325 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 C9orf85Q96MD7 179 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 C1orf43Q9BWL3 253 aa5.97□□□□□ -1.45
LINC01238-201ENST00000416204 MRPL18Q9H0U6 180 aaKnown RBP5.97□□□□□ -1.45
LINC01238-201ENST00000416204 C19orf71A6NCJ1 209 aa5.96□□□□□ -1.46
LINC01238-201ENST00000416204 IFITM10A6NMD0 228 aa5.96□□□□□ -1.46
LINC01238-201ENST00000416204 P01737 135 aa5.96□□□□□ -1.46
LINC01238-201ENST00000416204 RNASE3P12724 160 aaKnown RBP5.96□□□□□ -1.46
LINC01238-201ENST00000416204 Q0VG73 95 aa5.96□□□□□ -1.46
LINC01238-201ENST00000416204 CLPSL2Q6UWE3 100 aa5.96□□□□□ -1.46
LINC01238-201ENST00000416204 COX8CQ7Z4L0 72 aa5.96□□□□□ -1.46
LINC01238-201ENST00000416204 TMEM18Q96B42 140 aa5.96□□□□□ -1.46
LINC01238-201ENST00000416204 RPP21Q9H633 154 aaKnown RBP5.96□□□□□ -1.46
LINC01238-201ENST00000416204 FAT4Q6V0I7 4981 aa5.96□□□□□ -1.46
LINC01238-201ENST00000416204 ESDP10768 282 aa5.95□□□□□ -1.46
LINC01238-201ENST00000416204 SAPCD1Q5SSQ6 148 aa5.95□□□□□ -1.46
LINC01238-201ENST00000416204 FAM74A4Q5TZK3 123 aa5.95□□□□□ -1.46
LINC01238-201ENST00000416204 SDIM1Q6ZPB5 146 aa5.95□□□□□ -1.46
LINC01238-201ENST00000416204 TMEM136Q6ZRR5 245 aa5.95□□□□□ -1.46
LINC01238-201ENST00000416204 PACRGQ96M98 296 aaPredicted RBP5.95□□□□□ -1.46
LINC01238-201ENST00000416204 PSG8Q9UQ74 426 aa5.95□□□□□ -1.46
LINC01238-201ENST00000416204 A0A087WWL8 130 aa5.94□□□□□ -1.46
LINC01238-201ENST00000416204 CIDEAO60543 219 aa5.94□□□□□ -1.46
LINC01238-201ENST00000416204 CRPP02741 224 aa5.94□□□□□ -1.46
LINC01238-201ENST00000416204 ANGP03950 147 aaKnown RBP5.94□□□□□ -1.46
LINC01238-201ENST00000416204 FABP4P15090 132 aa5.94□□□□□ -1.46
LINC01238-201ENST00000416204 FOXA3P55318 350 aaPredicted RBP5.94□□□□□ -1.46
LINC01238-201ENST00000416204 PRR27Q6MZM9 219 aa5.94□□□□□ -1.46
LINC01238-201ENST00000416204 UFSP1Q6NVU6 142 aa5.94□□□□□ -1.46
LINC01238-201ENST00000416204 PRNTQ86SH4 94 aa5.94□□□□□ -1.46
LINC01238-201ENST00000416204 C9orf163Q8N9P6 203 aa5.94□□□□□ -1.46
LINC01238-201ENST00000416204 NUP35Q8NFH5 326 aa5.94□□□□□ -1.46
LINC01238-201ENST00000416204 OR10D4PQ8NGN7 298 aa5.94□□□□□ -1.46
LINC01238-201ENST00000416204 HIST1H2BLQ99880 126 aa5.94□□□□□ -1.46
LINC01238-201ENST00000416204 A0A1B0GW15 77 aa5.93□□□□□ -1.46
LINC01238-201ENST00000416204 HIGD1CA8MV81 97 aa5.93□□□□□ -1.46
LINC01238-201ENST00000416204 APCSP02743 223 aa5.93□□□□□ -1.46
LINC01238-201ENST00000416204 S100A4P26447 101 aaKnown RBP5.93□□□□□ -1.46
LINC01238-201ENST00000416204 MPV17L2Q567V2 206 aa5.93□□□□□ -1.46
LINC01238-201ENST00000416204 FAM162BQ5T6X4 162 aa5.93□□□□□ -1.46
LINC01238-201ENST00000416204 ZFP2Q6ZN57 461 aa5.93□□□□□ -1.46
LINC01238-201ENST00000416204 LINC01600Q96MT4 127 aa5.93□□□□□ -1.46
LINC01238-201ENST00000416204 NDFIP1Q9BT67 221 aa5.93□□□□□ -1.46
LINC01238-201ENST00000416204 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
LINC01238-201ENST00000416204 NIT2Q9NQR4 276 aa5.93□□□□□ -1.46
LINC01238-201ENST00000416204 KIF25-AS1Q9Y6Z4 181 aa5.93□□□□□ -1.46
LINC01238-201ENST00000416204 A0A087WYN8 130 aa5.92□□□□□ -1.46
LINC01238-201ENST00000416204 A0A1B0GXF2 115 aa5.92□□□□□ -1.46
LINC01238-201ENST00000416204 A8MWV9 139 aa5.92□□□□□ -1.46
LINC01238-201ENST00000416204 H3BVH4 76 aa5.92□□□□□ -1.46
LINC01238-201ENST00000416204 RPS20P60866 119 aaKnown RBP5.92□□□□□ -1.46
LINC01238-201ENST00000416204 RAB4BP61018 213 aa5.92□□□□□ -1.46
LINC01238-201ENST00000416204 HBBP68871 147 aa5.92□□□□□ -1.46
LINC01238-201ENST00000416204 JOSD1Q15040 202 aaPredicted RBP5.92□□□□□ -1.46
LINC01238-201ENST00000416204 PYY3Q5JQD4 70 aa5.92□□□□□ -1.46
LINC01238-201ENST00000416204 MRPL54Q6P161 138 aaKnown RBP5.92□□□□□ -1.46
LINC01238-201ENST00000416204 IGLV10-54A0A075B6I4 117 aa5.91□□□□□ -1.46
LINC01238-201ENST00000416204 IGKV3D-20A0A0C4DH25 116 aa5.91□□□□□ -1.46
LINC01238-201ENST00000416204 GRIFINA4D1Z8 144 aa5.91□□□□□ -1.46
LINC01238-201ENST00000416204 RIGQ13278 110 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms