RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 LAMTOR2Q9Y2Q5 125 aa9.37□□□□□ -0.91
CPNE1-209ENST00000415920 COLCA2A8K830 154 aa9.36□□□□□ -0.91
CPNE1-209ENST00000415920 PHOX2AO14813 284 aa9.36□□□□□ -0.91
CPNE1-209ENST00000415920 COTL1Q14019 142 aa9.36□□□□□ -0.91
CPNE1-209ENST00000415920 ESRGQ1W209 222 aa9.36□□□□□ -0.91
CPNE1-209ENST00000415920 LYPD5Q6UWN5 251 aa9.36□□□□□ -0.91
CPNE1-209ENST00000415920 TMEM70Q9BUB7 260 aa9.36□□□□□ -0.91
CPNE1-209ENST00000415920 SMIM2Q9BVW6 85 aa9.36□□□□□ -0.91
CPNE1-209ENST00000415920 LOC389332A0A1B0GUA5 103 aa9.35□□□□□ -0.91
CPNE1-209ENST00000415920 PMCHP20382 165 aa9.35□□□□□ -0.91
CPNE1-209ENST00000415920 C20orf78Q9BR46 151 aa9.35□□□□□ -0.91
CPNE1-209ENST00000415920 MRPS16Q9Y3D3 137 aaKnown RBP9.35□□□□□ -0.91
CPNE1-209ENST00000415920 LINC00588Q9Y4M8 146 aa9.35□□□□□ -0.91
CPNE1-209ENST00000415920 HSPG2P98160 4391 aa9.35□□□□□ -0.91
CPNE1-209ENST00000415920 IGLV2-18A0A075B6J9 118 aa9.34□□□□□ -0.91
CPNE1-209ENST00000415920 TRBV25-1A0A075B6N4 114 aa9.34□□□□□ -0.91
CPNE1-209ENST00000415920 AMTP48728 403 aa9.34□□□□□ -0.91
CPNE1-209ENST00000415920 LELP1Q5T871 98 aa9.34□□□□□ -0.91
CPNE1-209ENST00000415920 ALKBH7Q9BT30 221 aaPredicted RBP9.34□□□□□ -0.91
CPNE1-209ENST00000415920 TRBV6-8A0A0A6YYG3 113 aa9.33□□□□□ -0.92
CPNE1-209ENST00000415920 TRBV27A0A0K0K1C4 114 aa9.33□□□□□ -0.92
CPNE1-209ENST00000415920 I3L3M4 83 aa9.33□□□□□ -0.92
CPNE1-209ENST00000415920 TRGC2P03986 189 aa9.33□□□□□ -0.92
CPNE1-209ENST00000415920 FCER1GP30273 86 aa9.33□□□□□ -0.92
CPNE1-209ENST00000415920 TIRAPP58753 221 aa9.33□□□□□ -0.92
CPNE1-209ENST00000415920 TMEM97Q5BJF2 176 aa9.33□□□□□ -0.92
CPNE1-209ENST00000415920 WFDC10BQ8IUB3 73 aa9.33□□□□□ -0.92
CPNE1-209ENST00000415920 KIR2DL4Q99706 377 aa9.33□□□□□ -0.92
CPNE1-209ENST00000415920 TRAV8-6A0A0B4J262 113 aa9.32□□□□□ -0.92
CPNE1-209ENST00000415920 IGHV1-24A0A0C4DH33 117 aa9.32□□□□□ -0.92
CPNE1-209ENST00000415920 VCYO14598 125 aa9.32□□□□□ -0.92
CPNE1-209ENST00000415920 TSHBP01222 138 aa9.32□□□□□ -0.92
CPNE1-209ENST00000415920 POLR2KP53803 58 aaKnown RBP9.32□□□□□ -0.92
CPNE1-209ENST00000415920 IQCJQ1A5X6 159 aa9.32□□□□□ -0.92
CPNE1-209ENST00000415920 Q6ZR54 194 aa9.31□□□□□ -0.92
CPNE1-209ENST00000415920 NTM-AS1Q6ZSK4 140 aa9.31□□□□□ -0.92
CPNE1-209ENST00000415920 CHCHD5Q9BSY4 110 aa9.31□□□□□ -0.92
CPNE1-209ENST00000415920 TMEM243Q9BU79 118 aa9.31□□□□□ -0.92
CPNE1-209ENST00000415920 UBE2L6O14933 153 aa9.3□□□□□ -0.92
CPNE1-209ENST00000415920 TCAPO15273 167 aa9.3□□□□□ -0.92
CPNE1-209ENST00000415920 RPL32P62910 135 aaKnown RBP9.3□□□□□ -0.92
CPNE1-209ENST00000415920 C18orf32Q8TCD1 76 aa9.3□□□□□ -0.92
CPNE1-209ENST00000415920 UPK3BQ9BT76 320 aa9.3□□□□□ -0.92
CPNE1-209ENST00000415920 NXT2Q9NPJ8 142 aaKnown RBP9.3□□□□□ -0.92
CPNE1-209ENST00000415920 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-209ENST00000415920 IGKV2-29A2NJV5 120 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-209ENST00000415920 SIVA1O15304 175 aa9.29□□□□□ -0.92
CPNE1-209ENST00000415920 IFI27P40305 119 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-209ENST00000415920 Q8N8P6 123 aa9.29□□□□□ -0.92
CPNE1-209ENST00000415920 PRSS3P2Q8NHM4 247 aa9.29□□□□□ -0.92
CPNE1-209ENST00000415920 IGHV3-30P01768 117 aa9.28□□□□□ -0.92
CPNE1-209ENST00000415920 IGHV3-33P01772 117 aa9.28□□□□□ -0.92
CPNE1-209ENST00000415920 IGHV3-30-3P0DP02 117 aa9.28□□□□□ -0.92
CPNE1-209ENST00000415920 IGHV3-30-5P0DP03 117 aa9.28□□□□□ -0.92
CPNE1-209ENST00000415920 GAGE6Q13070 117 aa9.28□□□□□ -0.92
CPNE1-209ENST00000415920 FA2HQ7L5A8 372 aa9.28□□□□□ -0.92
CPNE1-209ENST00000415920 LRP1BQ9NZR2 4599 aa9.27□□□□□ -0.93
CPNE1-209ENST00000415920 PRSS47A8MTI9 375 aa9.27□□□□□ -0.93
CPNE1-209ENST00000415920 RNASEKQ6P5S7 137 aaKnown RBP9.27□□□□□ -0.93
CPNE1-209ENST00000415920 Q8N3U1 123 aa9.27□□□□□ -0.93
CPNE1-209ENST00000415920 CHCHD7Q9BUK0 85 aa9.27□□□□□ -0.93
CPNE1-209ENST00000415920 A0A087WX48 190 aa9.26□□□□□ -0.93
CPNE1-209ENST00000415920 TMEM262E9PQX1 116 aa9.26□□□□□ -0.93
CPNE1-209ENST00000415920 MPV17L2Q567V2 206 aa9.26□□□□□ -0.93
CPNE1-209ENST00000415920 AMMECR1LQ6DCA0 310 aa9.26□□□□□ -0.93
CPNE1-209ENST00000415920 NIT1Q86X76 327 aa9.26□□□□□ -0.93
CPNE1-209ENST00000415920 Q9H8V8 135 aa9.26□□□□□ -0.93
CPNE1-209ENST00000415920 PKIAP61925 76 aa9.25□□□□□ -0.93
CPNE1-209ENST00000415920 ORMDL2Q53FV1 153 aa9.25□□□□□ -0.93
CPNE1-209ENST00000415920 C1orf196B1AJZ1 125 aa9.24□□□□□ -0.93
CPNE1-209ENST00000415920 DNAH10OSP0CZ25 163 aa9.24□□□□□ -0.93
CPNE1-209ENST00000415920 ESDP10768 282 aa9.24□□□□□ -0.93
CPNE1-209ENST00000415920 BTF3P20290 206 aaKnown RBP9.24□□□□□ -0.93
CPNE1-209ENST00000415920 LAGE3Q14657 143 aa9.24□□□□□ -0.93
CPNE1-209ENST00000415920 LINC01556Q5JQF7 62 aa9.24□□□□□ -0.93
CPNE1-209ENST00000415920 BAGE3Q86Y29 109 aa9.24□□□□□ -0.93
CPNE1-209ENST00000415920 TMEM18Q96B42 140 aa9.24□□□□□ -0.93
CPNE1-209ENST00000415920 AP5S1Q9NUS5 200 aa9.24□□□□□ -0.93
CPNE1-209ENST00000415920 K7EMI3 77 aa9.23□□□□□ -0.93
CPNE1-209ENST00000415920 FGF6P10767 208 aa9.23□□□□□ -0.93
CPNE1-209ENST00000415920 RPL39P62891 51 aaKnown RBP9.23□□□□□ -0.93
CPNE1-209ENST00000415920 TNP2Q05952 138 aa9.23□□□□□ -0.93
CPNE1-209ENST00000415920 TTC32Q5I0X7 151 aa9.23□□□□□ -0.93
CPNE1-209ENST00000415920 Q8N976 141 aa9.23□□□□□ -0.93
CPNE1-209ENST00000415920 C20orf203Q8NBC4 194 aa9.23□□□□□ -0.93
CPNE1-209ENST00000415920 APOBP04114 4563 aaKnown RBP9.22□□□□□ -0.93
CPNE1-209ENST00000415920 HIST1H2BKO60814 126 aa9.22□□□□□ -0.93
CPNE1-209ENST00000415920 ANGP03950 147 aaKnown RBP9.22□□□□□ -0.93
CPNE1-209ENST00000415920 HIST1H2BJP06899 126 aa9.22□□□□□ -0.93
CPNE1-209ENST00000415920 HIST1H2BOP23527 126 aa9.22□□□□□ -0.93
CPNE1-209ENST00000415920 HIST1H2BBP33778 126 aa9.22□□□□□ -0.93
CPNE1-209ENST00000415920 HIST1H2BDP58876 126 aa9.22□□□□□ -0.93
CPNE1-209ENST00000415920 RAB5BP61020 215 aa9.22□□□□□ -0.93
CPNE1-209ENST00000415920 HIST1H2BCP62807 126 aa9.22□□□□□ -0.93
CPNE1-209ENST00000415920 RBX1P62877 108 aa9.22□□□□□ -0.93
CPNE1-209ENST00000415920 HIST2H2BEQ16778 126 aa9.22□□□□□ -0.93
CPNE1-209ENST00000415920 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.22□□□□□ -0.93
CPNE1-209ENST00000415920 CLPSL2Q6UWE3 100 aa9.22□□□□□ -0.93
CPNE1-209ENST00000415920 HIST1H2BHQ93079 126 aa9.22□□□□□ -0.93
CPNE1-209ENST00000415920 URB1-AS1Q96HZ7 61 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms