RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 K7EMI3 77 aa10.51□□□□□ -0.73
SGCE-202ENST00000415788 GATA1P15976 413 aaPredicted RBP10.51□□□□□ -0.73
SGCE-202ENST00000415788 PRO0461Q9UI25 63 aa10.51□□□□□ -0.73
SGCE-202ENST00000415788 MYMXA0A1B0GTQ4 84 aa10.51□□□□□ -0.73
SGCE-202ENST00000415788 H3BMG7 143 aa10.51□□□□□ -0.73
SGCE-202ENST00000415788 OVOL2Q9BRP0 275 aa10.51□□□□□ -0.73
SGCE-202ENST00000415788 IGKV3D-20A0A0C4DH25 116 aa10.5□□□□□ -0.73
SGCE-202ENST00000415788 RNASE4P34096 147 aaKnown RBP10.5□□□□□ -0.73
SGCE-202ENST00000415788 ETDBQ3ZM63 59 aa10.5□□□□□ -0.73
SGCE-202ENST00000415788 ORMDL2Q53FV1 153 aa10.5□□□□□ -0.73
SGCE-202ENST00000415788 C1orf158Q8N1D5 194 aa10.5□□□□□ -0.73
SGCE-202ENST00000415788 OR11H2Q8NH07 326 aa10.5□□□□□ -0.73
SGCE-202ENST00000415788 TRAV12-3A0A0B4J271 114 aa10.49□□□□□ -0.73
SGCE-202ENST00000415788 TMEM238LA0A1B0GVL6 79 aa10.49□□□□□ -0.73
SGCE-202ENST00000415788 A6NJY4 79 aa10.49□□□□□ -0.73
SGCE-202ENST00000415788 PRR9Q5T870 116 aa10.49□□□□□ -0.73
SGCE-202ENST00000415788 TRAV21A0A0B4J279 112 aa10.49□□□□□ -0.73
SGCE-202ENST00000415788 SMIM9A6NGZ8 99 aa10.49□□□□□ -0.73
SGCE-202ENST00000415788 MTURNQ8N3F0 131 aa10.49□□□□□ -0.73
SGCE-202ENST00000415788 IGHV3OR16-12A0A075B7B8 117 aa10.48□□□□□ -0.73
SGCE-202ENST00000415788 RBMY1A1P0DJD3 496 aaKnown RBP10.48□□□□□ -0.73
SGCE-202ENST00000415788 RBMY1CP0DJD4 496 aa10.48□□□□□ -0.73
SGCE-202ENST00000415788 RBMY1FQ15415 496 aaKnown RBP10.48□□□□□ -0.73
SGCE-202ENST00000415788 SH2D6Q7Z4S9 175 aa10.48□□□□□ -0.73
SGCE-202ENST00000415788 LINC01587Q99440 93 aa10.48□□□□□ -0.73
SGCE-202ENST00000415788 SMIM2Q9BVW6 85 aa10.48□□□□□ -0.73
SGCE-202ENST00000415788 RETNQ9HD89 108 aa10.48□□□□□ -0.73
SGCE-202ENST00000415788 MIFP14174 115 aa10.47□□□□□ -0.73
SGCE-202ENST00000415788 LYRM7Q5U5X0 104 aa10.47□□□□□ -0.73
SGCE-202ENST00000415788 LINC00467Q9BRT7 94 aa10.47□□□□□ -0.73
SGCE-202ENST00000415788 FBN3Q75N90 2809 aa10.47□□□□□ -0.73
SGCE-202ENST00000415788 TOMM6Q96B49 74 aa10.47□□□□□ -0.73
SGCE-202ENST00000415788 C20orf78Q9BR46 151 aa10.47□□□□□ -0.73
SGCE-202ENST00000415788 SPANXN1Q5VSR9 72 aa10.46□□□□□ -0.74
SGCE-202ENST00000415788 VCX2Q9H322 139 aa10.46□□□□□ -0.74
SGCE-202ENST00000415788 X6R8D5 127 aa10.46□□□□□ -0.74
SGCE-202ENST00000415788 APOMO95445 188 aa10.45□□□□□ -0.74
SGCE-202ENST00000415788 CKS1BP61024 79 aa10.45□□□□□ -0.74
SGCE-202ENST00000415788 NEXN-AS1Q8NBZ9 246 aa10.45□□□□□ -0.74
SGCE-202ENST00000415788 SCGB3A1Q96QR1 104 aa10.45□□□□□ -0.74
SGCE-202ENST00000415788 C11orf21Q9P2W6 132 aa10.45□□□□□ -0.74
SGCE-202ENST00000415788 FOXI1Q12951 378 aa10.44□□□□□ -0.74
SGCE-202ENST00000415788 FAM159AQ6UWV7 190 aa10.44□□□□□ -0.74
SGCE-202ENST00000415788 MEGF8Q7Z7M0 2845 aa10.44□□□□□ -0.74
SGCE-202ENST00000415788 IGHV1OR15-1A0A075B7D0 117 aa10.44□□□□□ -0.74
SGCE-202ENST00000415788 LINC01549A6NIU2 74 aa10.44□□□□□ -0.74
SGCE-202ENST00000415788 CFAP126Q5VTH2 177 aa10.44□□□□□ -0.74
SGCE-202ENST00000415788 CYSLTR1Q9Y271 337 aa10.44□□□□□ -0.74
SGCE-202ENST00000415788 M0R381 172 aa10.43□□□□□ -0.74
SGCE-202ENST00000415788 HTN1P15515 57 aa10.43□□□□□ -0.74
SGCE-202ENST00000415788 ANXA2RQ3ZCQ2 193 aa10.43□□□□□ -0.74
SGCE-202ENST00000415788 Q8NAQ8 132 aa10.43□□□□□ -0.74
SGCE-202ENST00000415788 TMEM263Q8WUH6 116 aaKnown RBP10.43□□□□□ -0.74
SGCE-202ENST00000415788 MRPL16Q9NX20 251 aaKnown RBP10.43□□□□□ -0.74
SGCE-202ENST00000415788 PGPEP1Q9NXJ5 209 aa10.43□□□□□ -0.74
SGCE-202ENST00000415788 TRAV26-2A0A0B4J265 109 aa10.42□□□□□ -0.74
SGCE-202ENST00000415788 PPP1R17O96001 155 aa10.42□□□□□ -0.74
SGCE-202ENST00000415788 UBE2D1P51668 147 aa10.42□□□□□ -0.74
SGCE-202ENST00000415788 SUMO2P61956 95 aaKnown RBP10.42□□□□□ -0.74
SGCE-202ENST00000415788 C16orf74Q96GX8 76 aa10.42□□□□□ -0.74
SGCE-202ENST00000415788 C11orf68Q9H3H3 251 aaKnown RBP10.42□□□□□ -0.74
SGCE-202ENST00000415788 IGHV4-28A0A0C4DH34 117 aa10.42□□□□□ -0.74
SGCE-202ENST00000415788 PAPPA-AS1Q5QFB9 102 aa10.42□□□□□ -0.74
SGCE-202ENST00000415788 Q6ZQT7 251 aa10.42□□□□□ -0.74
SGCE-202ENST00000415788 TRGV11A0A075B6L2 103 aa10.41□□□□□ -0.74
SGCE-202ENST00000415788 MED14OSP0DP75 135 aa10.41□□□□□ -0.74
SGCE-202ENST00000415788 SVIPQ8NHG7 77 aa10.41□□□□□ -0.74
SGCE-202ENST00000415788 PRADC1Q9BSG0 188 aa10.41□□□□□ -0.74
SGCE-202ENST00000415788 DPH3P1Q9H4G8 78 aa10.41□□□□□ -0.74
SGCE-202ENST00000415788 BAALCQ8WXS3 180 aa10.4□□□□□ -0.74
SGCE-202ENST00000415788 ZNF815PA8K554 130 aa10.4□□□□□ -0.75
SGCE-202ENST00000415788 CRYBA4P53673 196 aa10.4□□□□□ -0.75
SGCE-202ENST00000415788 UBE2D3P61077 147 aa10.4□□□□□ -0.75
SGCE-202ENST00000415788 UBE2D2P62837 147 aa10.4□□□□□ -0.75
SGCE-202ENST00000415788 TRBV20-1A0A075B6N2 111 aa10.39□□□□□ -0.75
SGCE-202ENST00000415788 H3BVH4 76 aa10.39□□□□□ -0.75
SGCE-202ENST00000415788 HERVK_113P61574 105 aa10.39□□□□□ -0.75
SGCE-202ENST00000415788 PPDPFLQ8WWR9 84 aa10.39□□□□□ -0.75
SGCE-202ENST00000415788 PRM2P04554 102 aa10.38□□□□□ -0.75
SGCE-202ENST00000415788 ZNF415Q09FC8 603 aa10.38□□□□□ -0.75
SGCE-202ENST00000415788 SRSF9Q13242 221 aaKnown RBP eCLIP10.38□□□□□ -0.75
SGCE-202ENST00000415788 C2orf66Q6UXQ4 117 aa10.38□□□□□ -0.75
SGCE-202ENST00000415788 SCGB1D4Q6XE38 83 aa10.38□□□□□ -0.75
SGCE-202ENST00000415788 SYT8Q8NBV8 401 aa10.38□□□□□ -0.75
SGCE-202ENST00000415788 RASL10AQ92737 203 aa10.38□□□□□ -0.75
SGCE-202ENST00000415788 CDIP1Q9H305 208 aa10.38□□□□□ -0.75
SGCE-202ENST00000415788 PRKDCP78527 4128 aaKnown RBP10.38□□□□□ -0.75
SGCE-202ENST00000415788 A0A0J9YWU9 116 aa10.38□□□□□ -0.75
SGCE-202ENST00000415788 PRSS29PA6NIE9 313 aa10.38□□□□□ -0.75
SGCE-202ENST00000415788 SMCPP49901 116 aaPredicted RBP10.38□□□□□ -0.75
SGCE-202ENST00000415788 RPL32P62910 135 aaKnown RBP10.38□□□□□ -0.75
SGCE-202ENST00000415788 C11orf72Q8NBR9 251 aa10.38□□□□□ -0.75
SGCE-202ENST00000415788 TSPAN13O95857 204 aa10.37□□□□□ -0.75
SGCE-202ENST00000415788 GEMIN7Q9H840 131 aaKnown RBP10.37□□□□□ -0.75
SGCE-202ENST00000415788 IGHV3-16A0A0C4DH30 117 aa10.36□□□□□ -0.75
SGCE-202ENST00000415788 PLAC8L1A1L4L8 177 aa10.36□□□□□ -0.75
SGCE-202ENST00000415788 DEFB4AO15263 64 aa10.36□□□□□ -0.75
SGCE-202ENST00000415788 PSMB2P49721 201 aa10.36□□□□□ -0.75
SGCE-202ENST00000415788 EMP1P54849 157 aa10.36□□□□□ -0.75
SGCE-202ENST00000415788 DAZ2Q13117 558 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms