RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 FAT1Q14517 4588 aa11.41□□□□□ -0.58
CDC42EP1-202ENST00000415670 A0A096LPF7 62 aa11.41□□□□□ -0.58
CDC42EP1-202ENST00000415670 NBDYA0A0U1RRE5 68 aa11.41□□□□□ -0.58
CDC42EP1-202ENST00000415670 TNFRSF6BO95407 300 aa11.41□□□□□ -0.58
CDC42EP1-202ENST00000415670 TRGC2P03986 189 aa11.41□□□□□ -0.58
CDC42EP1-202ENST00000415670 UBE2D3P61077 147 aa11.41□□□□□ -0.58
CDC42EP1-202ENST00000415670 UBE2D2P62837 147 aa11.41□□□□□ -0.58
CDC42EP1-202ENST00000415670 MRPL23Q16540 153 aaKnown RBP11.41□□□□□ -0.58
CDC42EP1-202ENST00000415670 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP1-202ENST00000415670 ALKBH7Q9BT30 221 aaPredicted RBP11.41□□□□□ -0.58
CDC42EP1-202ENST00000415670 C20orf78Q9BR46 151 aa11.4□□□□□ -0.58
CDC42EP1-202ENST00000415670 ST20Q9HBF5 79 aa11.4□□□□□ -0.58
CDC42EP1-202ENST00000415670 SRIP30626 198 aa11.39□□□□□ -0.59
CDC42EP1-202ENST00000415670 SUMO2P61956 95 aaKnown RBP11.39□□□□□ -0.59
CDC42EP1-202ENST00000415670 SH2D6Q7Z4S9 175 aa11.39□□□□□ -0.59
CDC42EP1-202ENST00000415670 KRTAP1-5Q9BYS1 174 aa11.39□□□□□ -0.59
CDC42EP1-202ENST00000415670 MYCBP2O75592 4640 aa11.39□□□□□ -0.59
CDC42EP1-202ENST00000415670 PRSS47A8MTI9 375 aa11.38□□□□□ -0.59
CDC42EP1-202ENST00000415670 NUDT3O95989 172 aa11.38□□□□□ -0.59
CDC42EP1-202ENST00000415670 POLR2KP53803 58 aaKnown RBP11.38□□□□□ -0.59
CDC42EP1-202ENST00000415670 ATP6V0E2Q8NHE4 81 aa11.38□□□□□ -0.59
CDC42EP1-202ENST00000415670 TMEM70Q9BUB7 260 aa11.38□□□□□ -0.59
CDC42EP1-202ENST00000415670 VPS13BQ7Z7G8 4022 aa11.38□□□□□ -0.59
CDC42EP1-202ENST00000415670 SDHAF1A6NFY7 115 aa11.37□□□□□ -0.59
CDC42EP1-202ENST00000415670 INAFM2P0DMQ5 153 aa11.37□□□□□ -0.59
CDC42EP1-202ENST00000415670 RPL32P62910 135 aaKnown RBP11.37□□□□□ -0.59
CDC42EP1-202ENST00000415670 NEGR1Q7Z3B1 354 aa11.37□□□□□ -0.59
CDC42EP1-202ENST00000415670 DAZ4Q86SG3 579 aaKnown RBP11.37□□□□□ -0.59
CDC42EP1-202ENST00000415670 MAP1LC3AQ9H492 121 aa11.37□□□□□ -0.59
CDC42EP1-202ENST00000415670 DAZ3Q9NR90 486 aaKnown RBP11.37□□□□□ -0.59
CDC42EP1-202ENST00000415670 FLG2Q5D862 2391 aaPredicted RBP11.36□□□□□ -0.59
CDC42EP1-202ENST00000415670 TRBV27A0A0K0K1C4 114 aa11.36□□□□□ -0.59
CDC42EP1-202ENST00000415670 LINC00588Q9Y4M8 146 aa11.36□□□□□ -0.59
CDC42EP1-202ENST00000415670 EPM2AB3EWF7 344 aa11.35□□□□□ -0.59
CDC42EP1-202ENST00000415670 VCYO14598 125 aa11.35□□□□□ -0.59
CDC42EP1-202ENST00000415670 SMIM2Q9BVW6 85 aa11.35□□□□□ -0.59
CDC42EP1-202ENST00000415670 IGHV3-38A0A0C4DH36 116 aa11.34□□□□□ -0.59
CDC42EP1-202ENST00000415670 I3L3M4 83 aa11.34□□□□□ -0.59
CDC42EP1-202ENST00000415670 PMCHP20382 165 aa11.34□□□□□ -0.59
CDC42EP1-202ENST00000415670 C18orf32Q8TCD1 76 aa11.34□□□□□ -0.59
CDC42EP1-202ENST00000415670 GTSF1LQ9H1H1 148 aa11.34□□□□□ -0.59
CDC42EP1-202ENST00000415670 SRRM2Q9UQ35 2752 aaKnown RBP11.33□□□□□ -0.59
CDC42EP1-202ENST00000415670 LOC389332A0A1B0GUA5 103 aa11.33□□□□□ -0.6
CDC42EP1-202ENST00000415670 TIRAPP58753 221 aa11.33□□□□□ -0.6
CDC42EP1-202ENST00000415670 Q8N8P6 123 aa11.33□□□□□ -0.6
CDC42EP1-202ENST00000415670 COTL1Q14019 142 aa11.32□□□□□ -0.6
CDC42EP1-202ENST00000415670 IQCJQ1A5X6 159 aa11.32□□□□□ -0.6
CDC42EP1-202ENST00000415670 TMEM97Q5BJF2 176 aa11.32□□□□□ -0.6
CDC42EP1-202ENST00000415670 LYPD5Q6UWN5 251 aa11.32□□□□□ -0.6
CDC42EP1-202ENST00000415670 NXT2Q9NPJ8 142 aaKnown RBP11.32□□□□□ -0.6
CDC42EP1-202ENST00000415670 C1orf196B1AJZ1 125 aa11.31□□□□□ -0.6
CDC42EP1-202ENST00000415670 TSHBP01222 138 aa11.31□□□□□ -0.6
CDC42EP1-202ENST00000415670 IFI27P40305 119 aaPredicted RBP11.31□□□□□ -0.6
CDC42EP1-202ENST00000415670 XGP55808 180 aa11.31□□□□□ -0.6
CDC42EP1-202ENST00000415670 ESRGQ1W209 222 aa11.31□□□□□ -0.6
CDC42EP1-202ENST00000415670 NTM-AS1Q6ZSK4 140 aa11.31□□□□□ -0.6
CDC42EP1-202ENST00000415670 KIR2DL4Q99706 377 aa11.31□□□□□ -0.6
CDC42EP1-202ENST00000415670 TCAPO15273 167 aa11.3□□□□□ -0.6
CDC42EP1-202ENST00000415670 Q0VG73 95 aa11.3□□□□□ -0.6
CDC42EP1-202ENST00000415670 PRSS3P2Q8NHM4 247 aa11.3□□□□□ -0.6
CDC42EP1-202ENST00000415670 TRBV6-8A0A0A6YYG3 113 aa11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 K7EMI3 77 aa11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 HIST1H2BKO60814 126 aa11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 HIST1H2BJP06899 126 aa11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 HIST1H2BOP23527 126 aa11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 HIST1H2BBP33778 126 aa11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 HIST1H2BDP58876 126 aa11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 HIST1H2BCP62807 126 aa11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 HIST2H2BEQ16778 126 aa11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 DEFB104AQ8WTQ1 72 aa11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 HIST1H2BHQ93079 126 aa11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 HIST1H2BNQ99877 126 aa11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 HIST1H2BMQ99879 126 aa11.29□□□□□ -0.6
CDC42EP1-202ENST00000415670 LINC01546A6NGU7 62 aa11.28□□□□□ -0.6
CDC42EP1-202ENST00000415670 FCER1GP30273 86 aa11.28□□□□□ -0.6
CDC42EP1-202ENST00000415670 LELP1Q5T871 98 aa11.28□□□□□ -0.6
CDC42EP1-202ENST00000415670 TRBV25-1A0A075B6N4 114 aa11.27□□□□□ -0.61
CDC42EP1-202ENST00000415670 IGHV1-24A0A0C4DH33 117 aa11.27□□□□□ -0.61
CDC42EP1-202ENST00000415670 AMTP48728 403 aa11.27□□□□□ -0.61
CDC42EP1-202ENST00000415670 CCL18P55774 89 aa11.27□□□□□ -0.61
CDC42EP1-202ENST00000415670 RAB5BP61020 215 aa11.27□□□□□ -0.61
CDC42EP1-202ENST00000415670 FA2HQ7L5A8 372 aa11.27□□□□□ -0.61
CDC42EP1-202ENST00000415670 URB1-AS1Q96HZ7 61 aa11.27□□□□□ -0.61
CDC42EP1-202ENST00000415670 Q9H8V8 135 aa11.27□□□□□ -0.61
CDC42EP1-202ENST00000415670 SMR3BP02814 79 aaPredicted RBP11.26□□□□□ -0.61
CDC42EP1-202ENST00000415670 LINC00614P0C842 121 aa11.26□□□□□ -0.61
CDC42EP1-202ENST00000415670 ESDP10768 282 aa11.26□□□□□ -0.61
CDC42EP1-202ENST00000415670 Q5VSD8 79 aa11.26□□□□□ -0.61
CDC42EP1-202ENST00000415670 NIT1Q86X76 327 aa11.26□□□□□ -0.61
CDC42EP1-202ENST00000415670 BAGE3Q86Y29 109 aa11.26□□□□□ -0.61
CDC42EP1-202ENST00000415670 CHCHD7Q9BUK0 85 aa11.26□□□□□ -0.61
CDC42EP1-202ENST00000415670 MRPS16Q9Y3D3 137 aaKnown RBP11.26□□□□□ -0.61
CDC42EP1-202ENST00000415670 LAGE3Q14657 143 aa11.25□□□□□ -0.61
CDC42EP1-202ENST00000415670 TMEM243Q9BU79 118 aa11.25□□□□□ -0.61
CDC42EP1-202ENST00000415670 HAMPP81172 84 aa11.24□□□□□ -0.61
CDC42EP1-202ENST00000415670 ORMDL2Q53FV1 153 aa11.24□□□□□ -0.61
CDC42EP1-202ENST00000415670 RNASEKQ6P5S7 137 aaKnown RBP11.24□□□□□ -0.61
CDC42EP1-202ENST00000415670 CHCHD1Q96BP2 118 aaKnown RBP11.24□□□□□ -0.61
CDC42EP1-202ENST00000415670 AP5S1Q9NUS5 200 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms