RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 SH2D6Q7Z4S9 175 aa10.03□□□□□ -0.8
HMGA1P1-201ENST00000415560 SCGB3A1Q96QR1 104 aa10.03□□□□□ -0.8
HMGA1P1-201ENST00000415560 GTSF1LQ9H1H1 148 aa10.03□□□□□ -0.8
HMGA1P1-201ENST00000415560 Q9UF83 564 aa10.03□□□□□ -0.8
HMGA1P1-201ENST00000415560 A0A096LNJ9 63 aa10.02□□□□□ -0.81
HMGA1P1-201ENST00000415560 IGHV3-38A0A0C4DH36 116 aa10.02□□□□□ -0.81
HMGA1P1-201ENST00000415560 MRPL23Q16540 153 aaKnown RBP10.02□□□□□ -0.81
HMGA1P1-201ENST00000415560 ATP6V0E2Q8NHE4 81 aa10.02□□□□□ -0.81
HMGA1P1-201ENST00000415560 IFI27L1Q96BM0 104 aa10.02□□□□□ -0.81
HMGA1P1-201ENST00000415560 DNAH3Q8TD57 4116 aa10.01□□□□□ -0.81
HMGA1P1-201ENST00000415560 TRAV26-1A0A087WT03 109 aa10.01□□□□□ -0.81
HMGA1P1-201ENST00000415560 A0A0J9YY99 117 aa10.01□□□□□ -0.81
HMGA1P1-201ENST00000415560 LOC100131303A0A0U1RQF7 123 aa10.01□□□□□ -0.81
HMGA1P1-201ENST00000415560 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.01□□□□□ -0.81
HMGA1P1-201ENST00000415560 SCGB1D1O95968 90 aa10.01□□□□□ -0.81
HMGA1P1-201ENST00000415560 C3orf79P0CE67 100 aa10.01□□□□□ -0.81
HMGA1P1-201ENST00000415560 C20orf203Q8NBC4 194 aa10.01□□□□□ -0.81
HMGA1P1-201ENST00000415560 C20orf202A1L168 122 aa10□□□□□ -0.81
HMGA1P1-201ENST00000415560 H3BNG1 76 aa10□□□□□ -0.81
HMGA1P1-201ENST00000415560 NANOS2P60321 138 aaKnown RBP10□□□□□ -0.81
HMGA1P1-201ENST00000415560 JOSD1Q15040 202 aaPredicted RBP10□□□□□ -0.81
HMGA1P1-201ENST00000415560 PET117Q6UWS5 81 aa10□□□□□ -0.81
HMGA1P1-201ENST00000415560 Q6ZN92 141 aa10□□□□□ -0.81
HMGA1P1-201ENST00000415560 Q6ZTC4 211 aa10□□□□□ -0.81
HMGA1P1-201ENST00000415560 ERASQ7Z444 233 aa10□□□□□ -0.81
HMGA1P1-201ENST00000415560 DEFB104AQ8WTQ1 72 aa10□□□□□ -0.81
HMGA1P1-201ENST00000415560 TMEM141Q96I45 108 aa10□□□□□ -0.81
HMGA1P1-201ENST00000415560 ICOSQ9Y6W8 199 aa10□□□□□ -0.81
HMGA1P1-201ENST00000415560 TRBV25-1A0A075B6N4 114 aa9.99□□□□□ -0.81
HMGA1P1-201ENST00000415560 DEFB131BA0A096LNP1 70 aa9.99□□□□□ -0.81
HMGA1P1-201ENST00000415560 TRAV10A0A0B4J240 114 aa9.99□□□□□ -0.81
HMGA1P1-201ENST00000415560 PRSS1P07477 247 aa9.99□□□□□ -0.81
HMGA1P1-201ENST00000415560 PAPPA-AS1Q5QFB9 102 aa9.99□□□□□ -0.81
HMGA1P1-201ENST00000415560 VSIG2Q96IQ7 327 aa9.99□□□□□ -0.81
HMGA1P1-201ENST00000415560 SYS1-DBNDD2H3BUS1 97 aa9.98□□□□□ -0.81
HMGA1P1-201ENST00000415560 H7C423 109 aa9.98□□□□□ -0.81
HMGA1P1-201ENST00000415560 SMIM6P0DI80 62 aa9.98□□□□□ -0.81
HMGA1P1-201ENST00000415560 LINC00694P0DN24 101 aa9.98□□□□□ -0.81
HMGA1P1-201ENST00000415560 LINC00173Q6ZV60 143 aa9.98□□□□□ -0.81
HMGA1P1-201ENST00000415560 TIMM17AQ99595 171 aa9.98□□□□□ -0.81
HMGA1P1-201ENST00000415560 DNHD1Q96M86 4753 aa9.97□□□□□ -0.81
HMGA1P1-201ENST00000415560 NBEAL2Q6ZNJ1 2754 aa9.97□□□□□ -0.81
HMGA1P1-201ENST00000415560 UBE2L6O14933 153 aa9.97□□□□□ -0.81
HMGA1P1-201ENST00000415560 NPSP0C0P6 89 aa9.97□□□□□ -0.81
HMGA1P1-201ENST00000415560 SPATA12Q7Z6I5 190 aa9.97□□□□□ -0.81
HMGA1P1-201ENST00000415560 TMEM243Q9BU79 118 aa9.97□□□□□ -0.81
HMGA1P1-201ENST00000415560 CHCHD7Q9BUK0 85 aa9.97□□□□□ -0.81
HMGA1P1-201ENST00000415560 PYGO1Q9Y3Y4 419 aa9.97□□□□□ -0.81
HMGA1P1-201ENST00000415560 H0Y8G0 127 aa9.96□□□□□ -0.82
HMGA1P1-201ENST00000415560 RPL39P62891 51 aaKnown RBP9.96□□□□□ -0.82
HMGA1P1-201ENST00000415560 DGAT2L7PQ6IED9 249 aa9.96□□□□□ -0.82
HMGA1P1-201ENST00000415560 SPANXA1Q9NS26 97 aa9.96□□□□□ -0.82
HMGA1P1-201ENST00000415560 TRBV6-8A0A0A6YYG3 113 aa9.95□□□□□ -0.82
HMGA1P1-201ENST00000415560 PYY3Q5JQD4 70 aa9.95□□□□□ -0.82
HMGA1P1-201ENST00000415560 NTM-AS1Q6ZSK4 140 aa9.95□□□□□ -0.82
HMGA1P1-201ENST00000415560 TIMM21Q9BVV7 248 aa9.95□□□□□ -0.82
HMGA1P1-201ENST00000415560 MGAM2Q2M2H8 2515 aa9.95□□□□□ -0.82
HMGA1P1-201ENST00000415560 NOTCH1P46531 2555 aa9.94□□□□□ -0.82
HMGA1P1-201ENST00000415560 IGIPA6NJ69 53 aa9.94□□□□□ -0.82
HMGA1P1-201ENST00000415560 S100A12P80511 92 aa9.94□□□□□ -0.82
HMGA1P1-201ENST00000415560 AMMECR1LQ6DCA0 310 aa9.94□□□□□ -0.82
HMGA1P1-201ENST00000415560 LGALS9CQ6DKI2 356 aa9.94□□□□□ -0.82
HMGA1P1-201ENST00000415560 TMEM101Q96IK0 257 aa9.94□□□□□ -0.82
HMGA1P1-201ENST00000415560 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.93□□□□□ -0.82
HMGA1P1-201ENST00000415560 A0A096LPF7 62 aa9.93□□□□□ -0.82
HMGA1P1-201ENST00000415560 TRAV12-1A0A0B4J245 112 aa9.93□□□□□ -0.82
HMGA1P1-201ENST00000415560 IGKV2-29A2NJV5 120 aaPredicted RBP9.93□□□□□ -0.82
HMGA1P1-201ENST00000415560 CHCHD5Q9BSY4 110 aa9.93□□□□□ -0.82
HMGA1P1-201ENST00000415560 VCX2Q9H322 139 aa9.93□□□□□ -0.82
HMGA1P1-201ENST00000415560 PKIAP61925 76 aa9.92□□□□□ -0.82
HMGA1P1-201ENST00000415560 PMVKQ15126 192 aa9.92□□□□□ -0.82
HMGA1P1-201ENST00000415560 LINC01545Q5VT33 79 aa9.92□□□□□ -0.82
HMGA1P1-201ENST00000415560 LINC00518Q8N0U6 118 aa9.92□□□□□ -0.82
HMGA1P1-201ENST00000415560 C15orf53Q8NAA6 179 aa9.92□□□□□ -0.82
HMGA1P1-201ENST00000415560 C12orf57Q99622 126 aa9.92□□□□□ -0.82
HMGA1P1-201ENST00000415560 UBE2D4Q9Y2X8 147 aa9.92□□□□□ -0.82
HMGA1P1-201ENST00000415560 CSDC2Q9Y534 153 aaKnown RBP9.92□□□□□ -0.82
HMGA1P1-201ENST00000415560 A0A087WX48 190 aa9.91□□□□□ -0.82
HMGA1P1-201ENST00000415560 FGF6P10767 208 aa9.91□□□□□ -0.82
HMGA1P1-201ENST00000415560 ZNF25P17030 456 aaPredicted RBP9.91□□□□□ -0.82
HMGA1P1-201ENST00000415560 MRPL52Q86TS9 123 aaKnown RBP9.91□□□□□ -0.82
HMGA1P1-201ENST00000415560 BAALCQ8WXS3 180 aa9.91□□□□□ -0.82
HMGA1P1-201ENST00000415560 NBEAL1Q6ZS30 2694 aa9.9□□□□□ -0.82
HMGA1P1-201ENST00000415560 TIRAPP58753 221 aa9.9□□□□□ -0.82
HMGA1P1-201ENST00000415560 MRPS36P82909 103 aaKnown RBP9.9□□□□□ -0.82
HMGA1P1-201ENST00000415560 LELP1Q5T871 98 aa9.9□□□□□ -0.82
HMGA1P1-201ENST00000415560 TEX43Q6ZNM6 134 aa9.9□□□□□ -0.82
HMGA1P1-201ENST00000415560 OR5A1Q8NGJ0 315 aa9.9□□□□□ -0.82
HMGA1P1-201ENST00000415560 CHTOPQ9Y3Y2 248 aaKnown RBP9.9□□□□□ -0.82
HMGA1P1-201ENST00000415560 IGLV4-3A0A075B6K6 122 aa9.89□□□□□ -0.83
HMGA1P1-201ENST00000415560 TRAV8-6A0A0B4J262 113 aa9.89□□□□□ -0.83
HMGA1P1-201ENST00000415560 PRSS29PA6NIE9 313 aa9.89□□□□□ -0.83
HMGA1P1-201ENST00000415560 TMEM262E9PQX1 116 aa9.89□□□□□ -0.83
HMGA1P1-201ENST00000415560 GAGE6Q13070 117 aa9.89□□□□□ -0.83
HMGA1P1-201ENST00000415560 LYPD5Q6UWN5 251 aa9.89□□□□□ -0.83
HMGA1P1-201ENST00000415560 Q8N976 141 aa9.89□□□□□ -0.83
HMGA1P1-201ENST00000415560 C2orf88Q9BSF0 95 aa9.89□□□□□ -0.83
HMGA1P1-201ENST00000415560 HSBP1L1C9JCN9 74 aa9.88□□□□□ -0.83
HMGA1P1-201ENST00000415560 ODF1Q14990 250 aa9.88□□□□□ -0.83
HMGA1P1-201ENST00000415560 CST9LQ9H4G1 147 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms