RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 FOXA3P55318 350 aaPredicted RBP6.35□□□□□ -1.39
LINC01090-201ENST00000415357 HAMPP81172 84 aa6.35□□□□□ -1.39
LINC01090-201ENST00000415357 GAGE6Q13070 117 aa6.35□□□□□ -1.39
LINC01090-201ENST00000415357 KCNIP4Q6PIL6 250 aa6.35□□□□□ -1.39
LINC01090-201ENST00000415357 FAM231DQ6ZW35 169 aa6.35□□□□□ -1.39
LINC01090-201ENST00000415357 C15orf54Q8N8G6 183 aa6.35□□□□□ -1.39
LINC01090-201ENST00000415357 Q8N976 141 aa6.35□□□□□ -1.39
LINC01090-201ENST00000415357 BAALCQ8WXS3 180 aa6.35□□□□□ -1.39
LINC01090-201ENST00000415357 CHCHD7Q9BUK0 85 aa6.35□□□□□ -1.39
LINC01090-201ENST00000415357 CNFNQ9BYD5 112 aa6.35□□□□□ -1.39
LINC01090-201ENST00000415357 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.34□□□□□ -1.39
LINC01090-201ENST00000415357 TRAV26-2A0A0B4J265 109 aa6.34□□□□□ -1.39
LINC01090-201ENST00000415357 ZNF727A8MUV8 499 aa6.34□□□□□ -1.39
LINC01090-201ENST00000415357 C9JQL5 133 aa6.34□□□□□ -1.39
LINC01090-201ENST00000415357 H7C1H1 209 aa6.34□□□□□ -1.39
LINC01090-201ENST00000415357 ATP6V1G1O75348 118 aa6.34□□□□□ -1.39
LINC01090-201ENST00000415357 GCSHP23434 173 aa6.34□□□□□ -1.39
LINC01090-201ENST00000415357 WDR73Q6P4I2 378 aa6.34□□□□□ -1.39
LINC01090-201ENST00000415357 RASL11AQ6T310 242 aa6.34□□□□□ -1.39
LINC01090-201ENST00000415357 ATRAIDQ6UW56 229 aa6.34□□□□□ -1.39
LINC01090-201ENST00000415357 CLPSL2Q6UWE3 100 aa6.34□□□□□ -1.39
LINC01090-201ENST00000415357 LINC01551Q86U37 167 aa6.34□□□□□ -1.39
LINC01090-201ENST00000415357 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.34□□□□□ -1.39
LINC01090-201ENST00000415357 PGLYRP4Q96LB8 373 aa6.34□□□□□ -1.39
LINC01090-201ENST00000415357 FAT1Q14517 4588 aa6.33□□□□□ -1.4
LINC01090-201ENST00000415357 TRBV25-1A0A075B6N4 114 aa6.33□□□□□ -1.4
LINC01090-201ENST00000415357 ANGP03950 147 aaKnown RBP6.33□□□□□ -1.4
LINC01090-201ENST00000415357 XGP55808 180 aa6.33□□□□□ -1.4
LINC01090-201ENST00000415357 RBX1P62877 108 aa6.33□□□□□ -1.4
LINC01090-201ENST00000415357 ELOBQ15370 118 aa6.33□□□□□ -1.4
LINC01090-201ENST00000415357 ENHOQ6UWT2 76 aa6.33□□□□□ -1.4
LINC01090-201ENST00000415357 GATD1Q8NB37 220 aa6.33□□□□□ -1.4
LINC01090-201ENST00000415357 NTN5Q8WTR8 489 aaPredicted RBP6.33□□□□□ -1.4
LINC01090-201ENST00000415357 DNAH8Q96JB1 4490 aa6.33□□□□□ -1.4
LINC01090-201ENST00000415357 IGHV1-24A0A0C4DH33 117 aa6.32□□□□□ -1.4
LINC01090-201ENST00000415357 A8MWL6 223 aa6.32□□□□□ -1.4
LINC01090-201ENST00000415357 NDUFS6O75380 124 aaKnown RBP6.32□□□□□ -1.4
LINC01090-201ENST00000415357 CRPP02741 224 aa6.32□□□□□ -1.4
LINC01090-201ENST00000415357 IQCJQ1A5X6 159 aa6.32□□□□□ -1.4
LINC01090-201ENST00000415357 TMEM97Q5BJF2 176 aa6.32□□□□□ -1.4
LINC01090-201ENST00000415357 TEX261Q6UWH6 196 aa6.32□□□□□ -1.4
LINC01090-201ENST00000415357 RMI2Q96E14 147 aa6.32□□□□□ -1.4
LINC01090-201ENST00000415357 RPL39LQ96EH5 51 aaKnown RBP6.32□□□□□ -1.4
LINC01090-201ENST00000415357 NIT2Q9NQR4 276 aa6.32□□□□□ -1.4
LINC01090-201ENST00000415357 LINC01620Q4KN68 170 aa6.31□□□□□ -1.4
LINC01090-201ENST00000415357 C1orf43Q9BWL3 253 aa6.31□□□□□ -1.4
LINC01090-201ENST00000415357 OSTCQ9NRP0 149 aa6.31□□□□□ -1.4
LINC01090-201ENST00000415357 COX11Q9Y6N1 276 aa6.31□□□□□ -1.4
LINC01090-201ENST00000415357 HIGD1CA8MV81 97 aa6.3□□□□□ -1.4
LINC01090-201ENST00000415357 GAS8-AS1O95177 125 aa6.3□□□□□ -1.4
LINC01090-201ENST00000415357 HLA-DQA1P01909 254 aa6.3□□□□□ -1.4
LINC01090-201ENST00000415357 PKIAP61925 76 aa6.3□□□□□ -1.4
LINC01090-201ENST00000415357 RPL23P62829 140 aaKnown RBP6.3□□□□□ -1.4
LINC01090-201ENST00000415357 Q0VG73 95 aa6.3□□□□□ -1.4
LINC01090-201ENST00000415357 ADIRFQ15847 76 aa6.3□□□□□ -1.4
LINC01090-201ENST00000415357 SMIM15Q7Z3B0 74 aa6.3□□□□□ -1.4
LINC01090-201ENST00000415357 LINC00269Q8N2A0 174 aa6.3□□□□□ -1.4
LINC01090-201ENST00000415357 TSKUQ8WUA8 353 aa6.3□□□□□ -1.4
LINC01090-201ENST00000415357 ISOC2Q96AB3 205 aa6.3□□□□□ -1.4
LINC01090-201ENST00000415357 TMEM243Q9BU79 118 aa6.3□□□□□ -1.4
LINC01090-201ENST00000415357 FAM30AQ9NZY2 134 aa6.3□□□□□ -1.4
LINC01090-201ENST00000415357 V9GYV3 84 aa6.3□□□□□ -1.4
LINC01090-201ENST00000415357 IGLV4-60A0A075B6I1 120 aa6.29□□□□□ -1.4
LINC01090-201ENST00000415357 SMR3BP02814 79 aaPredicted RBP6.29□□□□□ -1.4
LINC01090-201ENST00000415357 AMTP48728 403 aa6.29□□□□□ -1.4
LINC01090-201ENST00000415357 COTL1Q14019 142 aa6.29□□□□□ -1.4
LINC01090-201ENST00000415357 TMEM241Q24JQ0 296 aa6.29□□□□□ -1.4
LINC01090-201ENST00000415357 C20orf203Q8NBC4 194 aa6.29□□□□□ -1.4
LINC01090-201ENST00000415357 BORCS7Q96B45 105 aa6.29□□□□□ -1.4
LINC01090-201ENST00000415357 GFRA4Q9GZZ7 299 aa6.29□□□□□ -1.4
LINC01090-201ENST00000415357 PRR34Q9NV39 138 aa6.29□□□□□ -1.4
LINC01090-201ENST00000415357 IGLV10-54A0A075B6I4 117 aa6.28□□□□□ -1.4
LINC01090-201ENST00000415357 A0A1B0GUT8 65 aa6.28□□□□□ -1.4
LINC01090-201ENST00000415357 PEA15Q15121 130 aa6.28□□□□□ -1.4
LINC01090-201ENST00000415357 MIAQ16674 131 aa6.28□□□□□ -1.4
LINC01090-201ENST00000415357 FAM74A3Q4VXF1 159 aa6.28□□□□□ -1.4
LINC01090-201ENST00000415357 NUP35Q8NFH5 326 aa6.28□□□□□ -1.4
LINC01090-201ENST00000415357 TMEM70Q9BUB7 260 aa6.28□□□□□ -1.4
LINC01090-201ENST00000415357 NAT8Q9UHE5 227 aa6.28□□□□□ -1.4
LINC01090-201ENST00000415357 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.27□□□□□ -1.41
LINC01090-201ENST00000415357 IGKV2-29A2NJV5 120 aaPredicted RBP6.27□□□□□ -1.41
LINC01090-201ENST00000415357 GAGE12HA6NDE8 117 aa6.27□□□□□ -1.41
LINC01090-201ENST00000415357 SDHAF1A6NFY7 115 aa6.27□□□□□ -1.41
LINC01090-201ENST00000415357 EPM2AB3EWF7 344 aa6.27□□□□□ -1.41
LINC01090-201ENST00000415357 UBE2L6O14933 153 aa6.27□□□□□ -1.41
LINC01090-201ENST00000415357 REG3AQ06141 175 aa6.27□□□□□ -1.41
LINC01090-201ENST00000415357 KRTAP26-1Q6PEX3 210 aa6.27□□□□□ -1.41
LINC01090-201ENST00000415357 AMN1Q8IY45 258 aa6.27□□□□□ -1.41
LINC01090-201ENST00000415357 FRZBQ92765 325 aa6.27□□□□□ -1.41
LINC01090-201ENST00000415357 RNF185Q96GF1 192 aa6.27□□□□□ -1.41
LINC01090-201ENST00000415357 KRTAP4-11Q9BYQ6 195 aa6.27□□□□□ -1.41
LINC01090-201ENST00000415357 TMEM191AQ9H0A3 160 aa6.27□□□□□ -1.41
LINC01090-201ENST00000415357 VPS13BQ7Z7G8 4022 aa6.27□□□□□ -1.41
LINC01090-201ENST00000415357 FAM231BA6NCW3 169 aa6.26□□□□□ -1.41
LINC01090-201ENST00000415357 USP17L23D6RBM5 183 aa6.26□□□□□ -1.41
LINC01090-201ENST00000415357 SMKR1H3BMG3 65 aa6.26□□□□□ -1.41
LINC01090-201ENST00000415357 NCR2O95944 276 aa6.26□□□□□ -1.41
LINC01090-201ENST00000415357 SLPIP03973 132 aa6.26□□□□□ -1.41
LINC01090-201ENST00000415357 RPS10P46783 165 aaKnown RBP6.26□□□□□ -1.41
LINC01090-201ENST00000415357 Q5VSD8 79 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms