RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 H3BVH4 76 aa11.23□□□□□ -0.61
SHMT2-202ENST00000414700 IGLC6P0CF74 106 aa11.23□□□□□ -0.61
SHMT2-202ENST00000414700 ZC2HC1BQ5TFG8 222 aa11.23□□□□□ -0.61
SHMT2-202ENST00000414700 C1QTNF4Q9BXJ3 329 aa11.23□□□□□ -0.61
SHMT2-202ENST00000414700 NXT2Q9NPJ8 142 aaKnown RBP11.23□□□□□ -0.61
SHMT2-202ENST00000414700 A0A1B0GWB2 263 aa11.23□□□□□ -0.61
SHMT2-202ENST00000414700 RNASE3P12724 160 aaKnown RBP11.23□□□□□ -0.61
SHMT2-202ENST00000414700 DEFB135Q30KP9 77 aa11.23□□□□□ -0.61
SHMT2-202ENST00000414700 K7EIL1 84 aa11.22□□□□□ -0.61
SHMT2-202ENST00000414700 K7EMI3 77 aa11.22□□□□□ -0.61
SHMT2-202ENST00000414700 FOXI1Q12951 378 aa11.22□□□□□ -0.61
SHMT2-202ENST00000414700 C20orf78Q9BR46 151 aa11.22□□□□□ -0.61
SHMT2-202ENST00000414700 CDIP1Q9H305 208 aa11.22□□□□□ -0.61
SHMT2-202ENST00000414700 TSPAN13O95857 204 aa11.21□□□□□ -0.61
SHMT2-202ENST00000414700 KIR2DL5BQ8NHK3 375 aa11.21□□□□□ -0.61
SHMT2-202ENST00000414700 IGHV3-16A0A0C4DH30 117 aa11.21□□□□□ -0.62
SHMT2-202ENST00000414700 A8MZ25 164 aa11.21□□□□□ -0.62
SHMT2-202ENST00000414700 SPINK8P0C7L1 97 aa11.21□□□□□ -0.62
SHMT2-202ENST00000414700 APOC4P55056 127 aa11.21□□□□□ -0.62
SHMT2-202ENST00000414700 HIST1H4GQ99525 98 aa11.21□□□□□ -0.62
SHMT2-202ENST00000414700 MEGF8Q7Z7M0 2845 aa11.2□□□□□ -0.62
SHMT2-202ENST00000414700 S100A4P26447 101 aaKnown RBP11.2□□□□□ -0.62
SHMT2-202ENST00000414700 ASIPP42127 132 aa11.2□□□□□ -0.62
SHMT2-202ENST00000414700 MAPKAPK5-AS1Q8N8E1 139 aa11.2□□□□□ -0.62
SHMT2-202ENST00000414700 SYT8Q8NBV8 401 aa11.2□□□□□ -0.62
SHMT2-202ENST00000414700 RNF185Q96GF1 192 aa11.2□□□□□ -0.62
SHMT2-202ENST00000414700 TRBV7-3A0A075B6L6 115 aa11.19□□□□□ -0.62
SHMT2-202ENST00000414700 OR11H2Q8NH07 326 aa11.19□□□□□ -0.62
SHMT2-202ENST00000414700 MSRB1Q9NZV6 116 aa11.19□□□□□ -0.62
SHMT2-202ENST00000414700 TNFRSF6BO95407 300 aa11.18□□□□□ -0.62
SHMT2-202ENST00000414700 C11orf72Q8NBR9 251 aa11.18□□□□□ -0.62
SHMT2-202ENST00000414700 COL7A1Q02388 2944 aa11.18□□□□□ -0.62
SHMT2-202ENST00000414700 CFAP126Q5VTH2 177 aa11.18□□□□□ -0.62
SHMT2-202ENST00000414700 LINC00467Q9BRT7 94 aa11.18□□□□□ -0.62
SHMT2-202ENST00000414700 ERG28Q9UKR5 140 aa11.18□□□□□ -0.62
SHMT2-202ENST00000414700 PRKDCP78527 4128 aaKnown RBP11.17□□□□□ -0.62
SHMT2-202ENST00000414700 Q6ZUT4 128 aa11.17□□□□□ -0.62
SHMT2-202ENST00000414700 Q8N8P6 123 aa11.17□□□□□ -0.62
SHMT2-202ENST00000414700 C9orf85Q96MD7 179 aa11.17□□□□□ -0.62
SHMT2-202ENST00000414700 MRPL35Q9NZE8 188 aaKnown RBP11.17□□□□□ -0.62
SHMT2-202ENST00000414700 X6R8D5 127 aa11.17□□□□□ -0.62
SHMT2-202ENST00000414700 TRGV11A0A075B6L2 103 aa11.16□□□□□ -0.62
SHMT2-202ENST00000414700 MT-ATP8P03928 68 aa11.16□□□□□ -0.62
SHMT2-202ENST00000414700 DEFB121Q5J5C9 76 aa11.16□□□□□ -0.62
SHMT2-202ENST00000414700 CNFNQ9BYD5 112 aa11.16□□□□□ -0.62
SHMT2-202ENST00000414700 M0R381 172 aa11.16□□□□□ -0.62
SHMT2-202ENST00000414700 PLNP26678 52 aa11.16□□□□□ -0.62
SHMT2-202ENST00000414700 RETNQ9HD89 108 aa11.16□□□□□ -0.62
SHMT2-202ENST00000414700 PHLDA3Q9Y5J5 127 aa11.16□□□□□ -0.62
SHMT2-202ENST00000414700 A0A087WX48 190 aa11.15□□□□□ -0.62
SHMT2-202ENST00000414700 PLAC8L1A1L4L8 177 aa11.15□□□□□ -0.62
SHMT2-202ENST00000414700 SMCPP49901 116 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-202ENST00000414700 VCX2Q9H322 139 aa11.15□□□□□ -0.62
SHMT2-202ENST00000414700 HUWE1Q7Z6Z7 4374 aaKnown RBP11.15□□□□□ -0.62
SHMT2-202ENST00000414700 XGP55808 180 aa11.14□□□□□ -0.63
SHMT2-202ENST00000414700 SPANXN1Q5VSR9 72 aa11.14□□□□□ -0.63
SHMT2-202ENST00000414700 SBSPONQ8IVN8 264 aa11.14□□□□□ -0.63
SHMT2-202ENST00000414700 TMEM263Q8WUH6 116 aaKnown RBP11.14□□□□□ -0.63
SHMT2-202ENST00000414700 RNF183Q96D59 192 aa11.14□□□□□ -0.63
SHMT2-202ENST00000414700 IGLV2-18A0A075B6J9 118 aa11.14□□□□□ -0.63
SHMT2-202ENST00000414700 GAS8-AS1O95177 125 aa11.14□□□□□ -0.63
SHMT2-202ENST00000414700 MED14OSP0DP75 135 aa11.14□□□□□ -0.63
SHMT2-202ENST00000414700 NFE4Q86UQ8 179 aa11.14□□□□□ -0.63
SHMT2-202ENST00000414700 MRAPQ8TCY5 172 aa11.14□□□□□ -0.63
SHMT2-202ENST00000414700 NACAE9PAV3 2078 aa11.13□□□□□ -0.63
SHMT2-202ENST00000414700 ZNF415Q09FC8 603 aa11.13□□□□□ -0.63
SHMT2-202ENST00000414700 PPDPFLQ8WWR9 84 aa11.13□□□□□ -0.63
SHMT2-202ENST00000414700 JPT2Q9H910 190 aa11.13□□□□□ -0.63
SHMT2-202ENST00000414700 PGPEP1Q9NXJ5 209 aa11.13□□□□□ -0.63
SHMT2-202ENST00000414700 DNAH9Q9NYC9 4486 aa11.13□□□□□ -0.63
SHMT2-202ENST00000414700 MYMXA0A1B0GTQ4 84 aa11.13□□□□□ -0.63
SHMT2-202ENST00000414700 DEFB4AO15263 64 aa11.13□□□□□ -0.63
SHMT2-202ENST00000414700 EMP1P54849 157 aa11.13□□□□□ -0.63
SHMT2-202ENST00000414700 IL17DQ8TAD2 202 aa11.13□□□□□ -0.63
SHMT2-202ENST00000414700 OVOL2Q9BRP0 275 aa11.12□□□□□ -0.63
SHMT2-202ENST00000414700 A6NJY4 79 aa11.11□□□□□ -0.63
SHMT2-202ENST00000414700 LAGE3Q14657 143 aa11.11□□□□□ -0.63
SHMT2-202ENST00000414700 ZNF876PQ49A33 203 aa11.11□□□□□ -0.63
SHMT2-202ENST00000414700 C16orf74Q96GX8 76 aa11.11□□□□□ -0.63
SHMT2-202ENST00000414700 IGHV4-4A0A075B6R2 117 aa11.11□□□□□ -0.63
SHMT2-202ENST00000414700 NXPH4O95158 308 aa11.11□□□□□ -0.63
SHMT2-202ENST00000414700 LYRM7Q5U5X0 104 aa11.11□□□□□ -0.63
SHMT2-202ENST00000414700 ANAPC13Q9BS18 74 aa11.11□□□□□ -0.63
SHMT2-202ENST00000414700 NOP10Q9NPE3 64 aaKnown RBP11.11□□□□□ -0.63
SHMT2-202ENST00000414700 TRAV12-1A0A0B4J245 112 aa11.1□□□□□ -0.63
SHMT2-202ENST00000414700 GATA1P15976 413 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-202ENST00000414700 TEN1Q86WV5 123 aa11.1□□□□□ -0.63
SHMT2-202ENST00000414700 IGHV4-28A0A0C4DH34 117 aa11.09□□□□□ -0.63
SHMT2-202ENST00000414700 H7C1H1 209 aa11.09□□□□□ -0.63
SHMT2-202ENST00000414700 PSMB2P49721 201 aa11.09□□□□□ -0.63
SHMT2-202ENST00000414700 Q6ZTI0 123 aa11.09□□□□□ -0.63
SHMT2-202ENST00000414700 Q8NAQ8 132 aa11.09□□□□□ -0.63
SHMT2-202ENST00000414700 F8VRH5 84 aa11.09□□□□□ -0.63
SHMT2-202ENST00000414700 M0R2P5 195 aa11.09□□□□□ -0.63
SHMT2-202ENST00000414700 GAGE5Q13069 117 aa11.09□□□□□ -0.63
SHMT2-202ENST00000414700 GAGE6Q13070 117 aa11.09□□□□□ -0.63
SHMT2-202ENST00000414700 CARD19Q96LW7 228 aa11.09□□□□□ -0.63
SHMT2-202ENST00000414700 SMIM9A6NGZ8 99 aa11.08□□□□□ -0.64
SHMT2-202ENST00000414700 CFAP161Q6P656 301 aa11.08□□□□□ -0.64
SHMT2-202ENST00000414700 C14orf178Q8N769 122 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms