RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 K7EIM0 57 aa6.49□□□□□ -1.37
PBRM1-209ENST00000412587 TRBV12-3P01733 135 aa6.49□□□□□ -1.37
PBRM1-209ENST00000412587 APOC4P55056 127 aa6.49□□□□□ -1.37
PBRM1-209ENST00000412587 UPK3BQ9BT76 320 aa6.49□□□□□ -1.37
PBRM1-209ENST00000412587 CRIP2P52943 208 aaPredicted RBP6.48□□□□□ -1.37
PBRM1-209ENST00000412587 CFHR3Q02985 330 aa6.48□□□□□ -1.37
PBRM1-209ENST00000412587 MIAQ16674 131 aa6.48□□□□□ -1.37
PBRM1-209ENST00000412587 IGLV11-55A0A075B6I3 123 aa6.48□□□□□ -1.37
PBRM1-209ENST00000412587 IGKV1-17P01599 117 aa6.48□□□□□ -1.37
PBRM1-209ENST00000412587 C22orf34Q6ZV56 151 aa6.48□□□□□ -1.37
PBRM1-209ENST00000412587 RPL39LQ96EH5 51 aaKnown RBP6.48□□□□□ -1.37
PBRM1-209ENST00000412587 C5orf56Q8N8D9 126 aa6.48□□□□□ -1.37
PBRM1-209ENST00000412587 TMEM263Q8WUH6 116 aaKnown RBP6.48□□□□□ -1.37
PBRM1-209ENST00000412587 NCKAP5O14513 1909 aa6.48□□□□□ -1.37
PBRM1-209ENST00000412587 DSCAML1Q8TD84 2053 aa6.48□□□□□ -1.37
PBRM1-209ENST00000412587 A0A0J9YXV3 536 aa6.48□□□□□ -1.37
PBRM1-209ENST00000412587 A0A0J9YXY3 114 aa6.48□□□□□ -1.37
PBRM1-209ENST00000412587 I3L2K1 104 aa6.48□□□□□ -1.37
PBRM1-209ENST00000412587 NXPH4O95158 308 aa6.48□□□□□ -1.37
PBRM1-209ENST00000412587 ANKRD11Q6UB99 2663 aaPredicted RBP6.47□□□□□ -1.37
PBRM1-209ENST00000412587 DSCAMO60469 2012 aa6.47□□□□□ -1.37
PBRM1-209ENST00000412587 IGHV3-16A0A0C4DH30 117 aa6.47□□□□□ -1.37
PBRM1-209ENST00000412587 CEP192Q8TEP8 1941 aa6.47□□□□□ -1.37
PBRM1-209ENST00000412587 MYCNOSP40205 109 aa6.47□□□□□ -1.37
PBRM1-209ENST00000412587 LMO4P61968 165 aa6.47□□□□□ -1.37
PBRM1-209ENST00000412587 TMEM61Q8N0U2 210 aa6.47□□□□□ -1.37
PBRM1-209ENST00000412587 MUC22E2RYF6 1773 aaPredicted RBP6.47□□□□□ -1.37
PBRM1-209ENST00000412587 LYRM9A8MSI8 78 aa6.46□□□□□ -1.37
PBRM1-209ENST00000412587 SPTSSBQ8NFR3 76 aa6.46□□□□□ -1.37
PBRM1-209ENST00000412587 C9orf85Q96MD7 179 aa6.46□□□□□ -1.37
PBRM1-209ENST00000412587 CTSGP08311 255 aa6.46□□□□□ -1.38
PBRM1-209ENST00000412587 FUSP35637 526 aaKnown RBP eCLIP6.46□□□□□ -1.38
PBRM1-209ENST00000412587 SLURP1P55000 103 aa6.46□□□□□ -1.38
PBRM1-209ENST00000412587 Q9H8V8 135 aa6.46□□□□□ -1.38
PBRM1-209ENST00000412587 SPRY2O43597 315 aa6.46□□□□□ -1.38
PBRM1-209ENST00000412587 BRI3O95415 125 aa6.46□□□□□ -1.38
PBRM1-209ENST00000412587 SPTBN4Q9H254 2564 aa6.46□□□□□ -1.38
PBRM1-209ENST00000412587 A0A096LNJ9 63 aa6.46□□□□□ -1.38
PBRM1-209ENST00000412587 SBSPONQ8IVN8 264 aa6.46□□□□□ -1.38
PBRM1-209ENST00000412587 TIRAPP58753 221 aa6.45□□□□□ -1.38
PBRM1-209ENST00000412587 C6orf226Q5I0X4 101 aa6.45□□□□□ -1.38
PBRM1-209ENST00000412587 SORL1Q92673 2214 aa6.45□□□□□ -1.38
PBRM1-209ENST00000412587 BRWD1-AS2P59051 145 aa6.45□□□□□ -1.38
PBRM1-209ENST00000412587 MRPL53Q96EL3 112 aaKnown RBP6.45□□□□□ -1.38
PBRM1-209ENST00000412587 PSCAO43653 123 aa6.45□□□□□ -1.38
PBRM1-209ENST00000412587 IGLV2-23P01705 113 aa6.45□□□□□ -1.38
PBRM1-209ENST00000412587 IGHV3-30-3P0DP02 117 aa6.45□□□□□ -1.38
PBRM1-209ENST00000412587 LENEPQ9Y5L5 61 aa6.45□□□□□ -1.38
PBRM1-209ENST00000412587 SS18Q15532 418 aa6.44□□□□□ -1.38
PBRM1-209ENST00000412587 PTPRSQ13332 1948 aa6.44□□□□□ -1.38
PBRM1-209ENST00000412587 TANC2Q9HCD6 1990 aa6.44□□□□□ -1.38
PBRM1-209ENST00000412587 IGHV1-58A0A0C4DH39 117 aa6.44□□□□□ -1.38
PBRM1-209ENST00000412587 TEX22C9J3V5 150 aa6.44□□□□□ -1.38
PBRM1-209ENST00000412587 CGB3P0DN86 165 aa6.44□□□□□ -1.38
PBRM1-209ENST00000412587 CGB7P0DN87 165 aa6.44□□□□□ -1.38
PBRM1-209ENST00000412587 RPL39P62891 51 aaKnown RBP6.44□□□□□ -1.38
PBRM1-209ENST00000412587 Q9HAA7 133 aa6.44□□□□□ -1.38
PBRM1-209ENST00000412587 ENHOQ6UWT2 76 aa6.44□□□□□ -1.38
PBRM1-209ENST00000412587 RNF185Q96GF1 192 aa6.44□□□□□ -1.38
PBRM1-209ENST00000412587 NUP210LQ5VU65 1888 aa6.44□□□□□ -1.38
PBRM1-209ENST00000412587 ZNF843Q8N446 348 aa6.44□□□□□ -1.38
PBRM1-209ENST00000412587 C9orf66Q5T8R8 295 aa6.43□□□□□ -1.38
PBRM1-209ENST00000412587 JMJD1CQ15652 2540 aa6.43□□□□□ -1.38
PBRM1-209ENST00000412587 ZFYVE26Q68DK2 2539 aa6.43□□□□□ -1.38
PBRM1-209ENST00000412587 F8WEM9 126 aa6.43□□□□□ -1.38
PBRM1-209ENST00000412587 LECT2O14960 151 aa6.43□□□□□ -1.38
PBRM1-209ENST00000412587 TLN2Q9Y4G6 2542 aa6.43□□□□□ -1.38
PBRM1-209ENST00000412587 TNFRSF13BO14836 293 aaPredicted RBP6.43□□□□□ -1.38
PBRM1-209ENST00000412587 EIF4EBP1Q13541 118 aaPredicted RBP6.43□□□□□ -1.38
PBRM1-209ENST00000412587 Q6ZS46 218 aa6.43□□□□□ -1.38
PBRM1-209ENST00000412587 HCFC1P51610 2035 aa6.43□□□□□ -1.38
PBRM1-209ENST00000412587 HIST2H2BCQ6DN03 193 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 HIST2H2BDQ6DRA6 164 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 SNURFQ9Y675 71 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 IGKV1D-37A0A075B6S9 117 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 TRAV7A0A075B6U4 112 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 IGHV4OR15-8A0A075B7B6 117 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 A0A087WW49 117 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 E7EUB6 86 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 XCL1P47992 114 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 CEMP1Q6PRD7 247 aaPredicted RBP6.42□□□□□ -1.38
PBRM1-209ENST00000412587 APRG1Q8IVJ8 170 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 LINC00574Q9H8X3 128 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 TMEM223A0PJW6 202 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 A6NDX4 124 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 FHL3Q13643 280 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 WFDC9Q8NEX5 89 aa6.42□□□□□ -1.38
PBRM1-209ENST00000412587 IGHV3-38A0A0C4DH36 116 aa6.41□□□□□ -1.38
PBRM1-209ENST00000412587 TMEM89A2RUT3 159 aa6.41□□□□□ -1.38
PBRM1-209ENST00000412587 PROP1O75360 226 aa6.41□□□□□ -1.38
PBRM1-209ENST00000412587 GNRH2O43555 120 aa6.41□□□□□ -1.38
PBRM1-209ENST00000412587 CLPSL1A2RUU4 121 aa6.41□□□□□ -1.38
PBRM1-209ENST00000412587 SND1-IT1Q9HBX3 110 aa6.41□□□□□ -1.38
PBRM1-209ENST00000412587 MRPL36Q9P0J6 103 aaKnown RBP6.41□□□□□ -1.38
PBRM1-209ENST00000412587 UTRNP46939 3433 aa6.41□□□□□ -1.38
PBRM1-209ENST00000412587 C2CD3Q4AC94 2353 aa6.41□□□□□ -1.38
PBRM1-209ENST00000412587 USP9XQ93008 2570 aaPredicted RBP6.41□□□□□ -1.38
PBRM1-209ENST00000412587 K7EMT4 169 aa6.41□□□□□ -1.38
PBRM1-209ENST00000412587 TMEM256-PLSCR3K7ERE1 68 aa6.41□□□□□ -1.38
PBRM1-209ENST00000412587 FSTL3O95633 263 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms