RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 HMGN1P05114 100 aa0.04□□□□□ -2.4
HDAC9-205ENST00000411993 MEIG1Q5JSS6 88 aa0.04□□□□□ -2.4
HDAC9-205ENST00000411993 Q6AWC8 147 aa0.04□□□□□ -2.4
HDAC9-205ENST00000411993 TTC9CQ8N5M4 171 aa0.04□□□□□ -2.4
HDAC9-205ENST00000411993 Q8N8P6 123 aa0.04□□□□□ -2.4
HDAC9-205ENST00000411993 LSM10Q969L4 123 aaKnown RBP0.04□□□□□ -2.4
HDAC9-205ENST00000411993 SNRNP25Q9BV90 132 aaKnown RBP0.04□□□□□ -2.4
HDAC9-205ENST00000411993 SPRR2GQ9BYE4 73 aa0.04□□□□□ -2.4
HDAC9-205ENST00000411993 NAA60Q9H7X0 242 aa0.04□□□□□ -2.4
HDAC9-205ENST00000411993 AHCTF1Q8WYP5 2266 aa0.04□□□□□ -2.4
HDAC9-205ENST00000411993 ARAP2Q8WZ64 1704 aa0.04□□□□□ -2.4
HDAC9-205ENST00000411993 DMBT1Q9UGM3 2413 aaPredicted RBP0.04□□□□□ -2.4
HDAC9-205ENST00000411993 CELSR2Q9HCU4 2923 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 MRC1P22897 1456 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 PXDNQ92626 1479 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 MYH8P13535 1937 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 HIVEP3Q5T1R4 2406 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 HRNRQ86YZ3 2850 aaPredicted RBP0.03□□□□□ -2.4
HDAC9-205ENST00000411993 TRAV22A0A0B4J277 110 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 MIF4GDA9UHW6 222 aaKnown RBP0.03□□□□□ -2.4
HDAC9-205ENST00000411993 M0R135 149 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 SPAG11BQ08648 103 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 SPAG11AQ6PDA7 123 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 SMIM4Q8WVI0 70 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 CNFNQ9BYD5 112 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 CYP4F30PQ9H0H9 118 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 LENEPQ9Y5L5 61 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 V9GYH0 126 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 PRDM2Q13029 1718 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 CACNA1CQ13936 2221 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 ASXL3Q9C0F0 2248 aa0.03□□□□□ -2.4
HDAC9-205ENST00000411993 NAIPQ13075 1403 aa0.03□□□□□ -2.41
HDAC9-205ENST00000411993 PPIP5K1Q6PFW1 1433 aa0.03□□□□□ -2.41
HDAC9-205ENST00000411993 PHLPP1O60346 1717 aa0.02□□□□□ -2.41
HDAC9-205ENST00000411993 K7EP13 123 aa0.02□□□□□ -2.41
HDAC9-205ENST00000411993 M0R3E3 92 aa0.02□□□□□ -2.41
HDAC9-205ENST00000411993 HAMPP81172 84 aa0.02□□□□□ -2.41
HDAC9-205ENST00000411993 Q56UQ5 140 aa0.02□□□□□ -2.41
HDAC9-205ENST00000411993 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.02□□□□□ -2.41
HDAC9-205ENST00000411993 PPP3R2Q96LZ3 170 aa0.02□□□□□ -2.41
HDAC9-205ENST00000411993 MYH9P35579 1960 aaKnown RBP0.02□□□□□ -2.41
HDAC9-205ENST00000411993 OTOGQ6ZRI0 2925 aa0.02□□□□□ -2.41
HDAC9-205ENST00000411993 FAM208BQ5VWN6 2430 aa0.01□□□□□ -2.41
HDAC9-205ENST00000411993 S100A3P33764 101 aa0.01□□□□□ -2.41
HDAC9-205ENST00000411993 C1orf54Q8WWF1 131 aa0.01□□□□□ -2.41
HDAC9-205ENST00000411993 SPCS1Q9Y6A9 102 aa0.01□□□□□ -2.41
HDAC9-205ENST00000411993 UBR5O95071 2799 aaPredicted RBP0.01□□□□□ -2.41
HDAC9-205ENST00000411993 MBD5Q9P267 1494 aa0.01□□□□□ -2.41
HDAC9-205ENST00000411993 BIVM-ERCC5R4GMW8 1640 aa0.01□□□□□ -2.41
HDAC9-205ENST00000411993 PATJQ8NI35 1801 aa0.01□□□□□ -2.41
HDAC9-205ENST00000411993 DOCK1Q14185 1865 aa0.01□□□□□ -2.41
HDAC9-205ENST00000411993 C10orf142B7Z368 130 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 SPTBN2O15020 2390 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 BCE1O60756 84 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 IFNGP01579 166 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 APOC2P02655 101 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 AKAIN1P0CW23 69 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 MYH7P12883 1935 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 FGF7P21781 194 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 BTG2P78543 158 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 CPSF1Q10570 1443 aaKnown RBP0□□□□□ -2.41
HDAC9-205ENST00000411993 CATR1Q13166 79 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 COX17Q14061 63 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 NHSL1Q5SYE7 1610 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 TMEM170BQ5T4T1 132 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 ERCC6L2Q5T890 1561 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 FOCADQ5VW36 1801 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 Q8IZM0 81 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 DOCK2Q92608 1830 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 TSLPQ969D9 159 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 MGST2Q99735 147 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 WNK3Q9BYP7 1800 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 NDUFA4L2Q9NRX3 87 aa0□□□□□ -2.41
HDAC9-205ENST00000411993 COL7A1Q02388 2944 aa-0□□□□□ -2.41
HDAC9-205ENST00000411993 KDM3BQ7LBC6 1761 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 LRRC37A2A6NM11 1700 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 LRP6O75581 1613 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 ROCK2O75116 1388 aaKnown RBP-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 KTN1Q86UP2 1357 aaKnown RBP-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 TRBV7-3A0A075B6L6 115 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 LOC100130705A0A1B0GUX0 176 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 F8VRH5 84 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 UQCR11O14957 56 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 APOC3P02656 99 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 WFDC2Q14508 124 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 DEFB109BQ30KR1 87 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 Q6JHZ5 121 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 BAGE2Q86Y30 109 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 C8orf59Q8N0T1 100 aaPredicted RBP-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 AMELXQ99217 191 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 SPANXDQ9BXN6 97 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 DYNLRB1Q9NP97 96 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 WNK2Q9Y3S1 2297 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 PI4KAP42356 2102 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 ZNF236Q9UL36 1845 aa-0.01□□□□□ -2.41
HDAC9-205ENST00000411993 ABCA2Q9BZC7 2435 aa-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 FXYD6-FXYD2A0A087WZ82 144 aa-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 IGLC7A0M8Q6 106 aa-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 SSSCA1O60232 199 aa-0.02□□□□□ -2.41
HDAC9-205ENST00000411993 SNAPC5O75971 98 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms