RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 H7C1H1 209 aa10.48□□□□□ -0.73
SCAMP4-203ENST00000411971 IFNA1P01562 189 aa10.48□□□□□ -0.73
SCAMP4-203ENST00000411971 SERTAD4-AS1Q5TG53 156 aa10.48□□□□□ -0.73
SCAMP4-203ENST00000411971 C9orf62Q8N4C0 152 aa10.48□□□□□ -0.73
SCAMP4-203ENST00000411971 GATD1Q8NB37 220 aa10.48□□□□□ -0.73
SCAMP4-203ENST00000411971 PGLYRP4Q96LB8 373 aa10.48□□□□□ -0.73
SCAMP4-203ENST00000411971 DPH3P1Q9H4G8 78 aa10.48□□□□□ -0.73
SCAMP4-203ENST00000411971 TNXBP22105 4242 aa10.47□□□□□ -0.73
SCAMP4-203ENST00000411971 F2Z2F3 143 aa10.47□□□□□ -0.73
SCAMP4-203ENST00000411971 BCL2P10415 239 aa10.47□□□□□ -0.73
SCAMP4-203ENST00000411971 CLRN3Q8NCR9 226 aa10.47□□□□□ -0.73
SCAMP4-203ENST00000411971 RPL39LQ96EH5 51 aaKnown RBP10.47□□□□□ -0.73
SCAMP4-203ENST00000411971 SMIM12Q96EX1 92 aa10.47□□□□□ -0.73
SCAMP4-203ENST00000411971 RNASE7Q9H1E1 156 aaKnown RBP10.47□□□□□ -0.73
SCAMP4-203ENST00000411971 A0A087WYN8 130 aa10.46□□□□□ -0.73
SCAMP4-203ENST00000411971 TRAV8-4A0A0B4J246 113 aa10.46□□□□□ -0.73
SCAMP4-203ENST00000411971 TRGC1P0CF51 173 aa10.46□□□□□ -0.73
SCAMP4-203ENST00000411971 Q6ZNX1 250 aa10.46□□□□□ -0.73
SCAMP4-203ENST00000411971 GTSF1Q8WW33 167 aa10.46□□□□□ -0.73
SCAMP4-203ENST00000411971 CNFNQ9BYD5 112 aa10.46□□□□□ -0.73
SCAMP4-203ENST00000411971 PDE6DO43924 150 aa10.45□□□□□ -0.74
SCAMP4-203ENST00000411971 AMTP48728 403 aa10.45□□□□□ -0.74
SCAMP4-203ENST00000411971 OCC1Q8TAD7 63 aa10.45□□□□□ -0.74
SCAMP4-203ENST00000411971 IGKV3OR2-268A0A0C4DH90 116 aa10.44□□□□□ -0.74
SCAMP4-203ENST00000411971 GAGE12HA6NDE8 117 aa10.44□□□□□ -0.74
SCAMP4-203ENST00000411971 GAS8-AS1O95177 125 aa10.44□□□□□ -0.74
SCAMP4-203ENST00000411971 SPACA4Q8TDM5 124 aa10.44□□□□□ -0.74
SCAMP4-203ENST00000411971 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.43□□□□□ -0.74
SCAMP4-203ENST00000411971 IGKV2-29A2NJV5 120 aaPredicted RBP10.43□□□□□ -0.74
SCAMP4-203ENST00000411971 COTL1Q14019 142 aa10.43□□□□□ -0.74
SCAMP4-203ENST00000411971 TWIST1Q15672 202 aa10.43□□□□□ -0.74
SCAMP4-203ENST00000411971 WDR73Q6P4I2 378 aa10.43□□□□□ -0.74
SCAMP4-203ENST00000411971 RPP21Q9H633 154 aaKnown RBP10.43□□□□□ -0.74
SCAMP4-203ENST00000411971 PLA2G2DQ9UNK4 145 aa10.43□□□□□ -0.74
SCAMP4-203ENST00000411971 IGHV3-64A0A075B6Q5 118 aa10.42□□□□□ -0.74
SCAMP4-203ENST00000411971 XKRY2A2RUG3 117 aa10.42□□□□□ -0.74
SCAMP4-203ENST00000411971 HIGD2BQ4VC39 106 aa10.42□□□□□ -0.74
SCAMP4-203ENST00000411971 TCTE3Q8IZS6 198 aa10.41□□□□□ -0.74
SCAMP4-203ENST00000411971 PRSS3P2Q8NHM4 247 aa10.41□□□□□ -0.74
SCAMP4-203ENST00000411971 FAM231BA6NCW3 169 aa10.4□□□□□ -0.74
SCAMP4-203ENST00000411971 UBE2L6O14933 153 aa10.4□□□□□ -0.74
SCAMP4-203ENST00000411971 COX6A2Q02221 97 aa10.4□□□□□ -0.74
SCAMP4-203ENST00000411971 ODF1Q14990 250 aa10.4□□□□□ -0.74
SCAMP4-203ENST00000411971 PLAC8Q9NZF1 115 aa10.4□□□□□ -0.74
SCAMP4-203ENST00000411971 TEX46H3BTG2 121 aa10.39□□□□□ -0.75
SCAMP4-203ENST00000411971 PHOX2AO14813 284 aa10.39□□□□□ -0.75
SCAMP4-203ENST00000411971 EIF5AL1Q6IS14 154 aaKnown RBP10.39□□□□□ -0.75
SCAMP4-203ENST00000411971 SLC51BQ86UW2 128 aa10.39□□□□□ -0.75
SCAMP4-203ENST00000411971 CHCHD10Q8WYQ3 142 aaPredicted RBP10.39□□□□□ -0.75
SCAMP4-203ENST00000411971 AP5S1Q9NUS5 200 aa10.39□□□□□ -0.75
SCAMP4-203ENST00000411971 BIN3Q9NQY0 253 aa10.38□□□□□ -0.75
SCAMP4-203ENST00000411971 SDHAF1A6NFY7 115 aa10.37□□□□□ -0.75
SCAMP4-203ENST00000411971 FGF6P10767 208 aa10.37□□□□□ -0.75
SCAMP4-203ENST00000411971 FOXI1Q12951 378 aa10.37□□□□□ -0.75
SCAMP4-203ENST00000411971 Q6ZRU5 148 aa10.37□□□□□ -0.75
SCAMP4-203ENST00000411971 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
SCAMP4-203ENST00000411971 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.36□□□□□ -0.75
SCAMP4-203ENST00000411971 RNASEKQ6P5S7 137 aaKnown RBP10.36□□□□□ -0.75
SCAMP4-203ENST00000411971 DPH3Q96FX2 82 aa10.36□□□□□ -0.75
SCAMP4-203ENST00000411971 RNF185Q96GF1 192 aa10.36□□□□□ -0.75
SCAMP4-203ENST00000411971 LRP2P98164 4655 aa10.35□□□□□ -0.75
SCAMP4-203ENST00000411971 A0A096LNI7 61 aa10.35□□□□□ -0.75
SCAMP4-203ENST00000411971 IGKV2-24A0A0C4DH68 120 aa10.35□□□□□ -0.75
SCAMP4-203ENST00000411971 RPS10P46783 165 aaKnown RBP10.35□□□□□ -0.75
SCAMP4-203ENST00000411971 GVQW2A0A096LPI5 108 aaPredicted RBP10.34□□□□□ -0.75
SCAMP4-203ENST00000411971 GATCO43716 136 aaKnown RBP10.34□□□□□ -0.75
SCAMP4-203ENST00000411971 TSHBP01222 138 aa10.34□□□□□ -0.75
SCAMP4-203ENST00000411971 APCSP02743 223 aa10.34□□□□□ -0.75
SCAMP4-203ENST00000411971 ESDP10768 282 aa10.34□□□□□ -0.75
SCAMP4-203ENST00000411971 AMMECR1LQ6DCA0 310 aa10.34□□□□□ -0.75
SCAMP4-203ENST00000411971 ALKAL2Q6UX46 152 aa10.34□□□□□ -0.75
SCAMP4-203ENST00000411971 NDUFS6O75380 124 aaKnown RBP10.33□□□□□ -0.76
SCAMP4-203ENST00000411971 NCR2O95944 276 aa10.33□□□□□ -0.76
SCAMP4-203ENST00000411971 MAJINQ3KP22 176 aa10.33□□□□□ -0.76
SCAMP4-203ENST00000411971 FAM231DQ6ZW35 169 aa10.33□□□□□ -0.76
SCAMP4-203ENST00000411971 LYPD6BQ8NI32 183 aa10.33□□□□□ -0.76
SCAMP4-203ENST00000411971 TMEM242Q9NWH2 141 aa10.33□□□□□ -0.76
SCAMP4-203ENST00000411971 TRBV6-5A0A0K0K1A5 114 aa10.32□□□□□ -0.76
SCAMP4-203ENST00000411971 XCL1P47992 114 aa10.32□□□□□ -0.76
SCAMP4-203ENST00000411971 OR5A1Q8NGJ0 315 aa10.32□□□□□ -0.76
SCAMP4-203ENST00000411971 LINC00959A0A1B0GUT2 108 aa10.31□□□□□ -0.76
SCAMP4-203ENST00000411971 TMEM250H0YL14 139 aa10.31□□□□□ -0.76
SCAMP4-203ENST00000411971 H7C423 109 aa10.31□□□□□ -0.76
SCAMP4-203ENST00000411971 CCL25O15444 150 aa10.31□□□□□ -0.76
SCAMP4-203ENST00000411971 TAGLN2P37802 199 aaKnown RBP10.31□□□□□ -0.76
SCAMP4-203ENST00000411971 CFAP161Q6P656 301 aa10.31□□□□□ -0.76
SCAMP4-203ENST00000411971 STPG4Q8N801 248 aa10.31□□□□□ -0.76
SCAMP4-203ENST00000411971 I3L3M4 83 aa10.3□□□□□ -0.76
SCAMP4-203ENST00000411971 PMCHP20382 165 aa10.3□□□□□ -0.76
SCAMP4-203ENST00000411971 CEBPGP53567 150 aa10.3□□□□□ -0.76
SCAMP4-203ENST00000411971 POLR2KP53803 58 aaKnown RBP10.3□□□□□ -0.76
SCAMP4-203ENST00000411971 PRR3P79522 188 aaKnown RBP10.3□□□□□ -0.76
SCAMP4-203ENST00000411971 A8MWL6 223 aa10.29□□□□□ -0.76
SCAMP4-203ENST00000411971 SMKR1H3BMG3 65 aa10.29□□□□□ -0.76
SCAMP4-203ENST00000411971 RAB4AP20338 218 aa10.28□□□□□ -0.76
SCAMP4-203ENST00000411971 CT83Q5H943 113 aa10.28□□□□□ -0.76
SCAMP4-203ENST00000411971 SMIM15Q7Z3B0 74 aa10.28□□□□□ -0.76
SCAMP4-203ENST00000411971 LINC01551Q86U37 167 aa10.28□□□□□ -0.76
SCAMP4-203ENST00000411971 AMN1Q8IY45 258 aa10.28□□□□□ -0.76
SCAMP4-203ENST00000411971 CDC42SE2Q9NRR3 84 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms