RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 CCDC167Q9P0B6 97 aa2.53□□□□□ -2
LSM5-206ENST00000409987 COL4A2P08572 1712 aa2.53□□□□□ -2
LSM5-206ENST00000409987 PCDH15Q96QU1 1955 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 MYO16Q9Y6X6 1858 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 TRBV20-1A0A075B6N2 111 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 PNMA8CA0A1B0GUJ8 204 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 TCRBV4S1A1TA0A5B7 111 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 CD3DP04234 171 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 CKS2P33552 79 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 ETV6P41212 452 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 Q1T7F1 81 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 CLLU1Q5K131 121 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 HCP5Q6MZN7 132 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 ATOH7Q8N100 152 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 OR5AS1Q8N127 324 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 C12orf57Q99622 126 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 SOX21Q9Y651 276 aaPredicted RBP2.52□□□□□ -2.01
LSM5-206ENST00000409987 TLN2Q9Y4G6 2542 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 ACANP16112 2415 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 MYH10P35580 1976 aa2.52□□□□□ -2.01
LSM5-206ENST00000409987 SHANK1Q9Y566 2161 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 TRAV10A0A0B4J240 114 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 TRGV4A0A0C4DH28 118 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 A0A0G2JMM0 328 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 A0A1W2PPB8 328 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 C2orf70A6NJV1 201 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 KIR3DP1A8MWS1 328 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 YPEL1O60688 119 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 RBP4P02753 201 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 APODP05090 189 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 PDE6HQ13956 83 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 OCIAD2Q56VL3 154 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 OTOSQ8NHW6 89 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 SPACA4Q8TDM5 124 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 Q96M85 177 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 TCEAL7Q9BRU2 100 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 CST11Q9H112 138 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 SAR1AQ9NR31 198 aa2.51□□□□□ -2.01
LSM5-206ENST00000409987 LSM2Q9Y333 95 aaKnown RBP2.51□□□□□ -2.01
LSM5-206ENST00000409987 MYO5AQ9Y4I1 1855 aaKnown RBP2.51□□□□□ -2.01
LSM5-206ENST00000409987 NSD1Q96L73 2696 aaPredicted RBP2.51□□□□□ -2.01
LSM5-206ENST00000409987 SCN8AQ9UQD0 1980 aa2.5□□□□□ -2.01
LSM5-206ENST00000409987 CPAMD8Q8IZJ3 1885 aa2.5□□□□□ -2.01
LSM5-206ENST00000409987 F6UZH7 168 aa2.5□□□□□ -2.01
LSM5-206ENST00000409987 H3BRN7 92 aa2.5□□□□□ -2.01
LSM5-206ENST00000409987 ERC2-IT1O76042 136 aa2.5□□□□□ -2.01
LSM5-206ENST00000409987 PYYP10082 97 aa2.5□□□□□ -2.01
LSM5-206ENST00000409987 MRPS10P82664 201 aaKnown RBP2.5□□□□□ -2.01
LSM5-206ENST00000409987 C2orf82Q6UX34 121 aa2.5□□□□□ -2.01
LSM5-206ENST00000409987 LINC00269Q8N2A0 174 aa2.5□□□□□ -2.01
LSM5-206ENST00000409987 Q8N2B8 174 aa2.5□□□□□ -2.01
LSM5-206ENST00000409987 TCTEX1D1Q8N7M0 179 aa2.5□□□□□ -2.01
LSM5-206ENST00000409987 HEATR5AQ86XA9 2040 aa2.5□□□□□ -2.01
LSM5-206ENST00000409987 RTTNQ86VV8 2226 aa2.5□□□□□ -2.01
LSM5-206ENST00000409987 BAZ2BQ9UIF8 2168 aaKnown RBP2.5□□□□□ -2.01
LSM5-206ENST00000409987 MYH8P13535 1937 aa2.49□□□□□ -2.01
LSM5-206ENST00000409987 MYH4Q9Y623 1939 aa2.49□□□□□ -2.01
LSM5-206ENST00000409987 BBIP1A8MTZ0 92 aa2.49□□□□□ -2.01
LSM5-206ENST00000409987 SCIMPQ6UWF3 145 aa2.49□□□□□ -2.01
LSM5-206ENST00000409987 CLECL1Q8IZS7 167 aa2.49□□□□□ -2.01
LSM5-206ENST00000409987 DEFB119Q8N690 84 aa2.49□□□□□ -2.01
LSM5-206ENST00000409987 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.49□□□□□ -2.01
LSM5-206ENST00000409987 MPC1Q9Y5U8 109 aa2.49□□□□□ -2.01
LSM5-206ENST00000409987 CHCHD2Q9Y6H1 151 aaPredicted RBP2.49□□□□□ -2.01
LSM5-206ENST00000409987 SVEP1Q4LDE5 3571 aa2.49□□□□□ -2.01
LSM5-206ENST00000409987 RYR1P21817 5038 aa2.49□□□□□ -2.01
LSM5-206ENST00000409987 ANK3Q12955 4377 aaKnown RBP2.49□□□□□ -2.01
LSM5-206ENST00000409987 TNRC6BQ9UPQ9 1833 aaKnown RBP2.49□□□□□ -2.01
LSM5-206ENST00000409987 BIRC6Q9NR09 4857 aa2.48□□□□□ -2.01
LSM5-206ENST00000409987 HELZP42694 1942 aaKnown RBP2.48□□□□□ -2.01
LSM5-206ENST00000409987 C3orf85A0A1B0GTC6 90 aa2.48□□□□□ -2.01
LSM5-206ENST00000409987 A6NN06 94 aa2.48□□□□□ -2.01
LSM5-206ENST00000409987 M0R129 80 aa2.48□□□□□ -2.01
LSM5-206ENST00000409987 FGF7P21781 194 aa2.48□□□□□ -2.01
LSM5-206ENST00000409987 IDO2Q6ZQW0 420 aa2.48□□□□□ -2.01
LSM5-206ENST00000409987 FAM19A2Q8N3H0 131 aa2.48□□□□□ -2.01
LSM5-206ENST00000409987 TTTY12Q9BZ98 90 aa2.48□□□□□ -2.01
LSM5-206ENST00000409987 SDK2Q58EX2 2172 aa2.48□□□□□ -2.01
LSM5-206ENST00000409987 PTPRDP23468 1912 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 ARHGAP32A7KAX9 2087 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 TRAV14DV4A0A0A6YYC5 116 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 IGHV1-24A0A0C4DH33 117 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 LOC100130705A0A1B0GUX0 176 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 C9orf170A2RU37 121 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 M0R2P5 195 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 CORTO00230 105 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 CXCL8P10145 99 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 BRS3P32247 399 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 CCSMST1Q4G0I0 132 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 DPH3Q96FX2 82 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 CIB3Q96Q77 187 aaPredicted RBP2.47□□□□□ -2.01
LSM5-206ENST00000409987 PDCD10Q9BUL8 212 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 ESPL1Q14674 2120 aa2.47□□□□□ -2.01
LSM5-206ENST00000409987 LOC107984156A0A0G2JMH3 177 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 IFITM5A6NNB3 132 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 ZNF736B4DX44 427 aaPredicted RBP2.46□□□□□ -2.02
LSM5-206ENST00000409987 IGKV4-1P06312 121 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 CD2P06729 351 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 AKAIN1P0CW23 69 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 MEIG1Q5JSS6 88 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms