RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 LAGE3Q14657 143 aa12.29□□□□□ -0.44
PAX3-208ENST00000409828 ELOBQ15370 118 aa12.29□□□□□ -0.44
PAX3-208ENST00000409828 C1orf134Q5TEV5 83 aa12.29□□□□□ -0.44
PAX3-208ENST00000409828 PRSS47A8MTI9 375 aa12.28□□□□□ -0.44
PAX3-208ENST00000409828 IBA57-AS1B1ANH7 110 aa12.28□□□□□ -0.44
PAX3-208ENST00000409828 H7C423 109 aa12.28□□□□□ -0.44
PAX3-208ENST00000409828 TCAPO15273 167 aa12.28□□□□□ -0.44
PAX3-208ENST00000409828 C6orf223Q8N319 242 aa12.28□□□□□ -0.44
PAX3-208ENST00000409828 CHCHD5Q9BSY4 110 aa12.28□□□□□ -0.44
PAX3-208ENST00000409828 TMEM243Q9BU79 118 aa12.28□□□□□ -0.44
PAX3-208ENST00000409828 A0A087WX48 190 aa12.27□□□□□ -0.45
PAX3-208ENST00000409828 AMTP48728 403 aa12.27□□□□□ -0.45
PAX3-208ENST00000409828 ATRAIDQ6UW56 229 aa12.27□□□□□ -0.45
PAX3-208ENST00000409828 PRELID3AQ96N28 172 aa12.27□□□□□ -0.45
PAX3-208ENST00000409828 A0A1B0GUV1 79 aa12.26□□□□□ -0.45
PAX3-208ENST00000409828 APCSP02743 223 aa12.26□□□□□ -0.45
PAX3-208ENST00000409828 NFE4Q86UQ8 179 aa12.26□□□□□ -0.45
PAX3-208ENST00000409828 KIR2DL4Q99706 377 aa12.26□□□□□ -0.45
PAX3-208ENST00000409828 SMCO4Q9NRQ5 59 aa12.26□□□□□ -0.45
PAX3-208ENST00000409828 DNAH10Q8IVF4 4471 aa12.26□□□□□ -0.45
PAX3-208ENST00000409828 TSHBP01222 138 aa12.25□□□□□ -0.45
PAX3-208ENST00000409828 NPYP01303 97 aa12.25□□□□□ -0.45
PAX3-208ENST00000409828 LINC00336Q6ZUF6 198 aa12.25□□□□□ -0.45
PAX3-208ENST00000409828 YPEL4Q96NS1 127 aa12.25□□□□□ -0.45
PAX3-208ENST00000409828 TMEM262E9PQX1 116 aa12.24□□□□□ -0.45
PAX3-208ENST00000409828 IGHV3-30P01768 117 aa12.24□□□□□ -0.45
PAX3-208ENST00000409828 IGHV3-33P01772 117 aa12.24□□□□□ -0.45
PAX3-208ENST00000409828 IGHV3-30-3P0DP02 117 aa12.24□□□□□ -0.45
PAX3-208ENST00000409828 IGHV3-30-5P0DP03 117 aa12.24□□□□□ -0.45
PAX3-208ENST00000409828 ESDP10768 282 aa12.24□□□□□ -0.45
PAX3-208ENST00000409828 SMIM2Q9BVW6 85 aa12.24□□□□□ -0.45
PAX3-208ENST00000409828 TGIF2-C20orf24A0A0A6YYL0 155 aa12.23□□□□□ -0.45
PAX3-208ENST00000409828 RTL8CO15255 209 aa12.23□□□□□ -0.45
PAX3-208ENST00000409828 TRAV8-3A0A0A6YYJ7 113 aa12.22□□□□□ -0.45
PAX3-208ENST00000409828 UBE2L6O14933 153 aa12.22□□□□□ -0.45
PAX3-208ENST00000409828 MPV17L2Q567V2 206 aa12.22□□□□□ -0.45
PAX3-208ENST00000409828 DNAH17Q9UFH2 4485 aa12.21□□□□□ -0.45
PAX3-208ENST00000409828 K7EMI3 77 aa12.21□□□□□ -0.45
PAX3-208ENST00000409828 FCER1GP30273 86 aa12.21□□□□□ -0.45
PAX3-208ENST00000409828 RBX1P62877 108 aa12.21□□□□□ -0.45
PAX3-208ENST00000409828 GAGE6Q13070 117 aa12.21□□□□□ -0.45
PAX3-208ENST00000409828 Q8N3U1 123 aa12.21□□□□□ -0.45
PAX3-208ENST00000409828 MAP1LC3AQ9H492 121 aa12.21□□□□□ -0.45
PAX3-208ENST00000409828 ZNF25P17030 456 aaPredicted RBP12.2□□□□□ -0.46
PAX3-208ENST00000409828 Q0VG73 95 aa12.2□□□□□ -0.46
PAX3-208ENST00000409828 Q6ZRN7 208 aaPredicted RBP12.2□□□□□ -0.46
PAX3-208ENST00000409828 MRPL18Q9H0U6 180 aaKnown RBP12.2□□□□□ -0.46
PAX3-208ENST00000409828 FRAS1Q86XX4 4008 aa12.2□□□□□ -0.46
PAX3-208ENST00000409828 SMAGPQ0VAQ4 97 aa12.19□□□□□ -0.46
PAX3-208ENST00000409828 Q8N976 141 aa12.19□□□□□ -0.46
PAX3-208ENST00000409828 KLK12Q9UKR0 248 aa12.19□□□□□ -0.46
PAX3-208ENST00000409828 FABP9Q0Z7S8 132 aa12.18□□□□□ -0.46
PAX3-208ENST00000409828 MRPL52Q86TS9 123 aaKnown RBP12.18□□□□□ -0.46
PAX3-208ENST00000409828 CBLN2Q8IUK8 224 aa12.18□□□□□ -0.46
PAX3-208ENST00000409828 Q8N8P6 123 aa12.18□□□□□ -0.46
PAX3-208ENST00000409828 DEFB104AQ8WTQ1 72 aa12.18□□□□□ -0.46
PAX3-208ENST00000409828 TMEM18Q96B42 140 aa12.18□□□□□ -0.46
PAX3-208ENST00000409828 PRR34Q9NV39 138 aa12.18□□□□□ -0.46
PAX3-208ENST00000409828 TRAPPC1Q9Y5R8 145 aa12.18□□□□□ -0.46
PAX3-208ENST00000409828 COX11Q9Y6N1 276 aa12.18□□□□□ -0.46
PAX3-208ENST00000409828 ANGP03950 147 aaKnown RBP12.17□□□□□ -0.46
PAX3-208ENST00000409828 KIAA1644Q3SXP7 199 aa12.17□□□□□ -0.46
PAX3-208ENST00000409828 RMI2Q96E14 147 aa12.17□□□□□ -0.46
PAX3-208ENST00000409828 ALKBH7Q9BT30 221 aaPredicted RBP12.17□□□□□ -0.46
PAX3-208ENST00000409828 TM2D2Q9BX73 214 aa12.17□□□□□ -0.46
PAX3-208ENST00000409828 NXT2Q9NPJ8 142 aaKnown RBP12.17□□□□□ -0.46
PAX3-208ENST00000409828 CSDC2Q9Y534 153 aaKnown RBP12.17□□□□□ -0.46
PAX3-208ENST00000409828 FAT2Q9NYQ8 4349 aa12.16□□□□□ -0.46
PAX3-208ENST00000409828 FGF6P10767 208 aa12.16□□□□□ -0.46
PAX3-208ENST00000409828 RAB5AP20339 215 aa12.16□□□□□ -0.46
PAX3-208ENST00000409828 MIAQ16674 131 aa12.16□□□□□ -0.46
PAX3-208ENST00000409828 AMMECR1LQ6DCA0 310 aa12.16□□□□□ -0.46
PAX3-208ENST00000409828 C20orf203Q8NBC4 194 aa12.16□□□□□ -0.46
PAX3-208ENST00000409828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.15□□□□□ -0.46
PAX3-208ENST00000409828 IGKV2-29A2NJV5 120 aaPredicted RBP12.15□□□□□ -0.46
PAX3-208ENST00000409828 PRSS29PA6NIE9 313 aa12.15□□□□□ -0.46
PAX3-208ENST00000409828 CRPP02741 224 aa12.15□□□□□ -0.46
PAX3-208ENST00000409828 UBE2WQ96B02 151 aa12.15□□□□□ -0.46
PAX3-208ENST00000409828 TIMM21Q9BVV7 248 aa12.15□□□□□ -0.46
PAX3-208ENST00000409828 ENHOQ6UWT2 76 aa12.14□□□□□ -0.47
PAX3-208ENST00000409828 IGLV4-60A0A075B6I1 120 aa12.13□□□□□ -0.47
PAX3-208ENST00000409828 LOC389332A0A1B0GUA5 103 aa12.13□□□□□ -0.47
PAX3-208ENST00000409828 ORMDL2Q53FV1 153 aa12.13□□□□□ -0.47
PAX3-208ENST00000409828 LINC00269Q8N2A0 174 aa12.13□□□□□ -0.47
PAX3-208ENST00000409828 TMEM101Q96IK0 257 aa12.13□□□□□ -0.47
PAX3-208ENST00000409828 Q9HAA7 133 aa12.13□□□□□ -0.47
PAX3-208ENST00000409828 TRAV8-4A0A0B4J246 113 aa12.12□□□□□ -0.47
PAX3-208ENST00000409828 G0S2P27469 103 aa12.12□□□□□ -0.47
PAX3-208ENST00000409828 REG3AQ06141 175 aa12.12□□□□□ -0.47
PAX3-208ENST00000409828 RNASEKQ6P5S7 137 aaKnown RBP12.12□□□□□ -0.47
PAX3-208ENST00000409828 LINC01546A6NGU7 62 aa12.11□□□□□ -0.47
PAX3-208ENST00000409828 S100A1P23297 94 aa12.11□□□□□ -0.47
PAX3-208ENST00000409828 OR5A1Q8NGJ0 315 aa12.11□□□□□ -0.47
PAX3-208ENST00000409828 UBE2D4Q9Y2X8 147 aa12.11□□□□□ -0.47
PAX3-208ENST00000409828 COLCA2A8K830 154 aa12.1□□□□□ -0.47
PAX3-208ENST00000409828 IFI27P40305 119 aaPredicted RBP12.1□□□□□ -0.47
PAX3-208ENST00000409828 TNP2Q05952 138 aa12.1□□□□□ -0.47
PAX3-208ENST00000409828 DGAT2L7PQ6IED9 249 aa12.1□□□□□ -0.47
PAX3-208ENST00000409828 C1orf43Q9BWL3 253 aa12.1□□□□□ -0.47
PAX3-208ENST00000409828 CDC42SE2Q9NRR3 84 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms