RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 GAGE6Q13070 117 aa7.32□□□□□ -1.24
CHMP3-205ENST00000409810 MPV17L2Q567V2 206 aa7.32□□□□□ -1.24
CHMP3-205ENST00000409810 FAM104BQ5XKR9 115 aa7.32□□□□□ -1.24
CHMP3-205ENST00000409810 UBE2WQ96B02 151 aa7.32□□□□□ -1.24
CHMP3-205ENST00000409810 A0A087WTM6 91 aa7.31□□□□□ -1.24
CHMP3-205ENST00000409810 PMCHP20382 165 aa7.31□□□□□ -1.24
CHMP3-205ENST00000409810 ATRAIDQ6UW56 229 aa7.31□□□□□ -1.24
CHMP3-205ENST00000409810 SPATA12Q7Z6I5 190 aa7.31□□□□□ -1.24
CHMP3-205ENST00000409810 CTDSP1Q9GZU7 261 aa7.31□□□□□ -1.24
CHMP3-205ENST00000409810 IGKV2D-24A0A075B6R9 120 aa7.3□□□□□ -1.24
CHMP3-205ENST00000409810 A0A1B0GXF2 115 aa7.3□□□□□ -1.24
CHMP3-205ENST00000409810 C16orf90A8MZG2 172 aa7.3□□□□□ -1.24
CHMP3-205ENST00000409810 RBX1P62877 108 aa7.3□□□□□ -1.24
CHMP3-205ENST00000409810 MRPL51Q4U2R6 128 aaKnown RBP7.3□□□□□ -1.24
CHMP3-205ENST00000409810 IMMP2LQ96T52 175 aa7.3□□□□□ -1.24
CHMP3-205ENST00000409810 TMEM70Q9BUB7 260 aa7.3□□□□□ -1.24
CHMP3-205ENST00000409810 DNAH11Q96DT5 4516 aa7.29□□□□□ -1.24
CHMP3-205ENST00000409810 A0A1B0GUV1 79 aa7.29□□□□□ -1.24
CHMP3-205ENST00000409810 H7C423 109 aa7.29□□□□□ -1.24
CHMP3-205ENST00000409810 CKS2P33552 79 aa7.29□□□□□ -1.24
CHMP3-205ENST00000409810 RPS10P46783 165 aaKnown RBP7.29□□□□□ -1.24
CHMP3-205ENST00000409810 MIAQ16674 131 aa7.29□□□□□ -1.24
CHMP3-205ENST00000409810 CDPF1Q6NVV7 123 aa7.29□□□□□ -1.24
CHMP3-205ENST00000409810 Q8N976 141 aa7.29□□□□□ -1.24
CHMP3-205ENST00000409810 BTF3L4Q96K17 158 aa7.29□□□□□ -1.24
CHMP3-205ENST00000409810 C1orf43Q9BWL3 253 aa7.29□□□□□ -1.24
CHMP3-205ENST00000409810 TRBV27A0A0K0K1C4 114 aa7.28□□□□□ -1.24
CHMP3-205ENST00000409810 SMKR1H3BMG3 65 aa7.28□□□□□ -1.24
CHMP3-205ENST00000409810 VCYO14598 125 aa7.28□□□□□ -1.24
CHMP3-205ENST00000409810 GAS8-AS1O95177 125 aa7.28□□□□□ -1.24
CHMP3-205ENST00000409810 PPBPP02775 128 aa7.28□□□□□ -1.24
CHMP3-205ENST00000409810 POLR2KP53803 58 aaKnown RBP7.28□□□□□ -1.24
CHMP3-205ENST00000409810 SUMO2P61956 95 aaKnown RBP7.28□□□□□ -1.24
CHMP3-205ENST00000409810 AMMECR1LQ6DCA0 310 aa7.28□□□□□ -1.24
CHMP3-205ENST00000409810 NRACQ8N912 160 aa7.28□□□□□ -1.24
CHMP3-205ENST00000409810 DEFB104AQ8WTQ1 72 aa7.28□□□□□ -1.24
CHMP3-205ENST00000409810 KIR2DL4Q99706 377 aa7.28□□□□□ -1.24
CHMP3-205ENST00000409810 PGPEP1Q9NXJ5 209 aa7.28□□□□□ -1.24
CHMP3-205ENST00000409810 DYNC1H1Q14204 4646 aaKnown RBP7.28□□□□□ -1.24
CHMP3-205ENST00000409810 TRAV9-1A0A075B6T8 112 aa7.27□□□□□ -1.25
CHMP3-205ENST00000409810 D6R8Y8 96 aa7.27□□□□□ -1.25
CHMP3-205ENST00000409810 TCAPO15273 167 aa7.27□□□□□ -1.25
CHMP3-205ENST00000409810 S100PP25815 95 aa7.27□□□□□ -1.25
CHMP3-205ENST00000409810 FCER1GP30273 86 aa7.27□□□□□ -1.25
CHMP3-205ENST00000409810 NDUFA5Q16718 116 aa7.27□□□□□ -1.25
CHMP3-205ENST00000409810 ORMDL3Q8N138 153 aa7.27□□□□□ -1.25
CHMP3-205ENST00000409810 LINC00269Q8N2A0 174 aa7.27□□□□□ -1.25
CHMP3-205ENST00000409810 C20orf78Q9BR46 151 aa7.27□□□□□ -1.25
CHMP3-205ENST00000409810 TMEM242Q9NWH2 141 aa7.27□□□□□ -1.25
CHMP3-205ENST00000409810 CARHSP1Q9Y2V2 147 aaKnown RBP7.27□□□□□ -1.25
CHMP3-205ENST00000409810 TRBV24-1A0A075B6N3 115 aa7.26□□□□□ -1.25
CHMP3-205ENST00000409810 C7orf77A4D0Y5 90 aa7.26□□□□□ -1.25
CHMP3-205ENST00000409810 LRCOL1A6NCL2 159 aa7.26□□□□□ -1.25
CHMP3-205ENST00000409810 PHOX2AO14813 284 aa7.26□□□□□ -1.25
CHMP3-205ENST00000409810 ZNF25P17030 456 aaPredicted RBP7.26□□□□□ -1.25
CHMP3-205ENST00000409810 RPL32P62910 135 aaKnown RBP7.26□□□□□ -1.25
CHMP3-205ENST00000409810 REG3AQ06141 175 aa7.26□□□□□ -1.25
CHMP3-205ENST00000409810 SMAGPQ0VAQ4 97 aa7.26□□□□□ -1.25
CHMP3-205ENST00000409810 RHEBQ15382 184 aa7.26□□□□□ -1.25
CHMP3-205ENST00000409810 C10orf91Q5T1B1 145 aa7.26□□□□□ -1.25
CHMP3-205ENST00000409810 RNASEKQ6P5S7 137 aaKnown RBP7.26□□□□□ -1.25
CHMP3-205ENST00000409810 CLPSL2Q6UWE3 100 aa7.26□□□□□ -1.25
CHMP3-205ENST00000409810 ENHOQ6UWT2 76 aa7.26□□□□□ -1.25
CHMP3-205ENST00000409810 NTN5Q8WTR8 489 aaPredicted RBP7.26□□□□□ -1.25
CHMP3-205ENST00000409810 PRR34Q9NV39 138 aa7.26□□□□□ -1.25
CHMP3-205ENST00000409810 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.25□□□□□ -1.25
CHMP3-205ENST00000409810 TRAV8-4A0A0B4J246 113 aa7.25□□□□□ -1.25
CHMP3-205ENST00000409810 IGKV2-29A2NJV5 120 aaPredicted RBP7.25□□□□□ -1.25
CHMP3-205ENST00000409810 TNFRSF6BO95407 300 aa7.25□□□□□ -1.25
CHMP3-205ENST00000409810 TSHBP01222 138 aa7.25□□□□□ -1.25
CHMP3-205ENST00000409810 KRTAP10-2P60368 255 aa7.25□□□□□ -1.25
CHMP3-205ENST00000409810 TMEM136Q6ZRR5 245 aa7.25□□□□□ -1.25
CHMP3-205ENST00000409810 C20orf203Q8NBC4 194 aa7.25□□□□□ -1.25
CHMP3-205ENST00000409810 TMEM101Q96IK0 257 aa7.25□□□□□ -1.25
CHMP3-205ENST00000409810 LAMTOR2Q9Y2Q5 125 aa7.25□□□□□ -1.25
CHMP3-205ENST00000409810 IGLV4-60A0A075B6I1 120 aa7.24□□□□□ -1.25
CHMP3-205ENST00000409810 FGF6P10767 208 aa7.24□□□□□ -1.25
CHMP3-205ENST00000409810 ESDP10768 282 aa7.24□□□□□ -1.25
CHMP3-205ENST00000409810 C14orf177Q52M58 125 aa7.24□□□□□ -1.25
CHMP3-205ENST00000409810 Q8N814 137 aa7.24□□□□□ -1.25
CHMP3-205ENST00000409810 CLRN3Q8NCR9 226 aa7.24□□□□□ -1.25
CHMP3-205ENST00000409810 TMEM18Q96B42 140 aa7.24□□□□□ -1.25
CHMP3-205ENST00000409810 PRELID3AQ96N28 172 aa7.24□□□□□ -1.25
CHMP3-205ENST00000409810 SMIM2Q9BVW6 85 aa7.24□□□□□ -1.25
CHMP3-205ENST00000409810 RPS10P5Q9NQ39 176 aa7.24□□□□□ -1.25
CHMP3-205ENST00000409810 DNAH5Q8TE73 4624 aa7.23□□□□□ -1.25
CHMP3-205ENST00000409810 NPYP01303 97 aa7.23□□□□□ -1.25
CHMP3-205ENST00000409810 HLA-DQA1P01909 254 aa7.23□□□□□ -1.25
CHMP3-205ENST00000409810 SVBPQ8N300 66 aa7.23□□□□□ -1.25
CHMP3-205ENST00000409810 OR5A1Q8NGJ0 315 aa7.23□□□□□ -1.25
CHMP3-205ENST00000409810 BAALCQ8WXS3 180 aa7.23□□□□□ -1.25
CHMP3-205ENST00000409810 IGLV5-52A0A0A0MRZ9 124 aa7.22□□□□□ -1.25
CHMP3-205ENST00000409810 SNAPINO95295 136 aa7.22□□□□□ -1.25
CHMP3-205ENST00000409810 APOC3P02656 99 aa7.22□□□□□ -1.25
CHMP3-205ENST00000409810 COX19Q49B96 90 aa7.22□□□□□ -1.25
CHMP3-205ENST00000409810 DGAT2L7PQ6IED9 249 aa7.22□□□□□ -1.25
CHMP3-205ENST00000409810 MAP1LC3AQ9H492 121 aa7.22□□□□□ -1.25
CHMP3-205ENST00000409810 LRP1BQ9NZR2 4599 aa7.22□□□□□ -1.25
CHMP3-205ENST00000409810 LECT2O14960 151 aa7.21□□□□□ -1.26
CHMP3-205ENST00000409810 RAB5AP20339 215 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms