RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 TVP23CQ96ET8 276 aa4.04□□□□□ -1.76
LSM5-203ENST00000409782 KCNS1Q96KK3 526 aa4.04□□□□□ -1.76
LSM5-203ENST00000409782 NKX6-2Q9C056 277 aaPredicted RBP4.04□□□□□ -1.76
LSM5-203ENST00000409782 MAP1LC3BQ9GZQ8 125 aa4.04□□□□□ -1.76
LSM5-203ENST00000409782 CYTL1Q9NRR1 136 aa4.04□□□□□ -1.76
LSM5-203ENST00000409782 PRO0255Q9UI72 69 aa4.04□□□□□ -1.76
LSM5-203ENST00000409782 EPDR1Q9UM22 224 aa4.04□□□□□ -1.76
LSM5-203ENST00000409782 ICOSQ9Y6W8 199 aa4.04□□□□□ -1.76
LSM5-203ENST00000409782 ARL2-SNX15V9GYD0 113 aa4.04□□□□□ -1.76
LSM5-203ENST00000409782 TRAV4A0A0B4J268 109 aa4.03□□□□□ -1.76
LSM5-203ENST00000409782 HMSDA8MTL9 139 aa4.03□□□□□ -1.76
LSM5-203ENST00000409782 UMAD1C9J7I0 102 aa4.03□□□□□ -1.76
LSM5-203ENST00000409782 SMLR1H3BR10 107 aa4.03□□□□□ -1.76
LSM5-203ENST00000409782 IFNA7P01567 189 aa4.03□□□□□ -1.76
LSM5-203ENST00000409782 IGHV3-53P01767 116 aa4.03□□□□□ -1.76
LSM5-203ENST00000409782 TYMSP04818 313 aa4.03□□□□□ -1.76
LSM5-203ENST00000409782 PFN1P07737 140 aaKnown RBP4.03□□□□□ -1.76
LSM5-203ENST00000409782 CRYBA4P53673 196 aa4.03□□□□□ -1.76
LSM5-203ENST00000409782 EIF5AP63241 154 aaKnown RBP4.03□□□□□ -1.76
LSM5-203ENST00000409782 FLI1Q01543 452 aaPredicted RBP4.03□□□□□ -1.76
LSM5-203ENST00000409782 SMUG1Q53HV7 270 aa4.03□□□□□ -1.76
LSM5-203ENST00000409782 SAPCD1Q5SSQ6 148 aa4.03□□□□□ -1.76
LSM5-203ENST00000409782 STOML3Q8TAV4 291 aa4.03□□□□□ -1.76
LSM5-203ENST00000409782 FAM104AQ969W3 186 aa4.03□□□□□ -1.76
LSM5-203ENST00000409782 HIST1H2BAQ96A08 127 aa4.03□□□□□ -1.76
LSM5-203ENST00000409782 TRGV4A0A0C4DH28 118 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 A0A0D9SG52 128 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 KANTRA0A1W2PQU2 76 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 C9JCJ5 164 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 K7EN84 100 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 ORM1P02763 201 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 SEC11BP0C7V7 166 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 NMUP48645 174 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 UBE2G2P60604 165 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 ESRGQ1W209 222 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 DPPA3Q6W0C5 159 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 PRNTQ86SH4 94 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 PTH2Q96A98 100 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 HHLA3Q9XRX5 114 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 RYR1P21817 5038 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 PKD1P98161 4303 aa4.02□□□□□ -1.77
LSM5-203ENST00000409782 A0A0J9YXV3 536 aa4.01□□□□□ -1.77
LSM5-203ENST00000409782 TRBV6-1A0A0K0K1D8 114 aa4.01□□□□□ -1.77
LSM5-203ENST00000409782 H0Y9J4 135 aa4.01□□□□□ -1.77
LSM5-203ENST00000409782 GNRH2O43555 120 aa4.01□□□□□ -1.77
LSM5-203ENST00000409782 SFTA3P0C7M3 94 aa4.01□□□□□ -1.77
LSM5-203ENST00000409782 TPT1P13693 172 aaKnown RBP4.01□□□□□ -1.77
LSM5-203ENST00000409782 SRIP30626 198 aa4.01□□□□□ -1.77
LSM5-203ENST00000409782 ZNF80P51504 273 aaPredicted RBP4.01□□□□□ -1.77
LSM5-203ENST00000409782 NEGR1Q7Z3B1 354 aa4.01□□□□□ -1.77
LSM5-203ENST00000409782 SH2D6Q7Z4S9 175 aa4.01□□□□□ -1.77
LSM5-203ENST00000409782 FAM213BQ8TBF2 198 aa4.01□□□□□ -1.77
LSM5-203ENST00000409782 FMC1Q96HJ9 113 aa4.01□□□□□ -1.77
LSM5-203ENST00000409782 FAM210AQ96ND0 272 aa4.01□□□□□ -1.77
LSM5-203ENST00000409782 TXNDC17Q9BRA2 123 aa4.01□□□□□ -1.77
LSM5-203ENST00000409782 ZNF471Q9BX82 626 aaPredicted RBP4.01□□□□□ -1.77
LSM5-203ENST00000409782 ZFP30Q9Y2G7 519 aa4.01□□□□□ -1.77
LSM5-203ENST00000409782 SNAI2O43623 268 aa4□□□□□ -1.77
LSM5-203ENST00000409782 PFDN1O60925 122 aa4□□□□□ -1.77
LSM5-203ENST00000409782 ASIPP42127 132 aa4□□□□□ -1.77
LSM5-203ENST00000409782 AKR1C3P42330 323 aa4□□□□□ -1.77
LSM5-203ENST00000409782 CXCL5P42830 114 aa4□□□□□ -1.77
LSM5-203ENST00000409782 UBE2G1P62253 170 aa4□□□□□ -1.77
LSM5-203ENST00000409782 RHOHQ15669 191 aa4□□□□□ -1.77
LSM5-203ENST00000409782 TCTE3Q8IZS6 198 aa4□□□□□ -1.77
LSM5-203ENST00000409782 MBD3L1Q8WWY6 194 aa4□□□□□ -1.77
LSM5-203ENST00000409782 KIF25-AS1Q9Y6Z4 181 aa4□□□□□ -1.77
LSM5-203ENST00000409782 LRP1BQ9NZR2 4599 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 PCLOQ9Y6V0 5065 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 IGKV3D-20A0A0C4DH25 116 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 TRBV6-4A0A1B0GX49 114 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 FABP5P3A8MUU1 101 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 B4DEV8 164 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 K7EP13 123 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 LTAP01374 205 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 MGST1P10620 155 aaKnown RBP3.99□□□□□ -1.77
LSM5-203ENST00000409782 RNASE3P12724 160 aaKnown RBP3.99□□□□□ -1.77
LSM5-203ENST00000409782 S100A4P26447 101 aaKnown RBP3.99□□□□□ -1.77
LSM5-203ENST00000409782 RAB5CP51148 216 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 LGALSLQ3ZCW2 172 aaPredicted RBP3.99□□□□□ -1.77
LSM5-203ENST00000409782 C5orf47Q569G3 176 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 DNLZQ5SXM8 178 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 FAM162BQ5T6X4 162 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 CFAP126Q5VTH2 177 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 EIF5AL1Q6IS14 154 aaKnown RBP3.99□□□□□ -1.77
LSM5-203ENST00000409782 LYPD5Q6UWN5 251 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 FAM19A1Q7Z5A9 133 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 SFT2D1Q8WV19 159 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 ZC2HC1AQ96GY0 325 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 PRADC1Q9BSG0 188 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 CHAC1Q9BUX1 264 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 RPP21Q9H633 154 aaKnown RBP3.99□□□□□ -1.77
LSM5-203ENST00000409782 IL36BQ9NZH7 164 aa3.99□□□□□ -1.77
LSM5-203ENST00000409782 TRAV1-1A0A0B4J248 108 aa3.98□□□□□ -1.77
LSM5-203ENST00000409782 A8MWV9 139 aa3.98□□□□□ -1.77
LSM5-203ENST00000409782 H3BVH4 76 aa3.98□□□□□ -1.77
LSM5-203ENST00000409782 SH2D1AO60880 128 aa3.98□□□□□ -1.77
LSM5-203ENST00000409782 NDUFS6O75380 124 aaKnown RBP3.98□□□□□ -1.77
LSM5-203ENST00000409782 CXCL1P09341 107 aa3.98□□□□□ -1.77
LSM5-203ENST00000409782 DNAH10OSP0CZ25 163 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms