RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 S100A2P29034 98 aa9.69□□□□□ -0.86
CHRNA1-204ENST00000409323 CCL18P55774 89 aa9.69□□□□□ -0.86
CHRNA1-204ENST00000409323 NIT1Q86X76 327 aa9.69□□□□□ -0.86
CHRNA1-204ENST00000409323 TMEM18Q96B42 140 aa9.69□□□□□ -0.86
CHRNA1-204ENST00000409323 DYNC2H1Q8NCM8 4307 aaKnown RBP9.69□□□□□ -0.86
CHRNA1-204ENST00000409323 TCAPO15273 167 aa9.68□□□□□ -0.86
CHRNA1-204ENST00000409323 LINC00614P0C842 121 aa9.68□□□□□ -0.86
CHRNA1-204ENST00000409323 POLR2KP53803 58 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-204ENST00000409323 TCTAP57738 103 aa9.68□□□□□ -0.86
CHRNA1-204ENST00000409323 DAZ4Q86SG3 579 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-204ENST00000409323 WFDC10BQ8IUB3 73 aa9.68□□□□□ -0.86
CHRNA1-204ENST00000409323 Q8N3U1 123 aa9.68□□□□□ -0.86
CHRNA1-204ENST00000409323 DAZ3Q9NR90 486 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-204ENST00000409323 PLECQ15149 4684 aaKnown RBP9.67□□□□□ -0.86
CHRNA1-204ENST00000409323 FABP4P15090 132 aa9.67□□□□□ -0.86
CHRNA1-204ENST00000409323 PDZD11Q5EBL8 140 aa9.67□□□□□ -0.86
CHRNA1-204ENST00000409323 SH2D6Q7Z4S9 175 aa9.67□□□□□ -0.86
CHRNA1-204ENST00000409323 SMIM2Q9BVW6 85 aa9.67□□□□□ -0.86
CHRNA1-204ENST00000409323 MAP1LC3AQ9H492 121 aa9.67□□□□□ -0.86
CHRNA1-204ENST00000409323 LYSTQ99698 3801 aa9.67□□□□□ -0.86
CHRNA1-204ENST00000409323 I3L3M4 83 aa9.67□□□□□ -0.86
CHRNA1-204ENST00000409323 PPP1R17O96001 155 aa9.67□□□□□ -0.86
CHRNA1-204ENST00000409323 TSHBP01222 138 aa9.67□□□□□ -0.86
CHRNA1-204ENST00000409323 IFI27P40305 119 aaPredicted RBP9.67□□□□□ -0.86
CHRNA1-204ENST00000409323 COTL1Q14019 142 aa9.67□□□□□ -0.86
CHRNA1-204ENST00000409323 IGLV2-18A0A075B6J9 118 aa9.66□□□□□ -0.86
CHRNA1-204ENST00000409323 TRBV6-8A0A0A6YYG3 113 aa9.66□□□□□ -0.86
CHRNA1-204ENST00000409323 OR10D4PQ8NGN7 298 aa9.66□□□□□ -0.86
CHRNA1-204ENST00000409323 C20orf78Q9BR46 151 aa9.66□□□□□ -0.86
CHRNA1-204ENST00000409323 TRBV27A0A0K0K1C4 114 aa9.65□□□□□ -0.86
CHRNA1-204ENST00000409323 VCYO14598 125 aa9.65□□□□□ -0.86
CHRNA1-204ENST00000409323 AMTP48728 403 aa9.65□□□□□ -0.86
CHRNA1-204ENST00000409323 AKR1D1P51857 326 aa9.65□□□□□ -0.86
CHRNA1-204ENST00000409323 LELP1Q5T871 98 aa9.65□□□□□ -0.86
CHRNA1-204ENST00000409323 LINC00518Q8N0U6 118 aa9.65□□□□□ -0.86
CHRNA1-204ENST00000409323 LINC00476Q8WZB0 136 aa9.65□□□□□ -0.86
CHRNA1-204ENST00000409323 MRPS16Q9Y3D3 137 aaKnown RBP9.65□□□□□ -0.86
CHRNA1-204ENST00000409323 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.64□□□□□ -0.87
CHRNA1-204ENST00000409323 IGKV2-29A2NJV5 120 aaPredicted RBP9.64□□□□□ -0.87
CHRNA1-204ENST00000409323 FCER1GP30273 86 aa9.64□□□□□ -0.87
CHRNA1-204ENST00000409323 GAGE6Q13070 117 aa9.64□□□□□ -0.87
CHRNA1-204ENST00000409323 CHCHD5Q9BSY4 110 aa9.64□□□□□ -0.87
CHRNA1-204ENST00000409323 TRBV25-1A0A075B6N4 114 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 IGHV3-30P01768 117 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 IGHV3-33P01772 117 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 SMIM6P0DI80 62 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 IGHV3-30-3P0DP02 117 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 IGHV3-30-5P0DP03 117 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 RPL32P62910 135 aaKnown RBP9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 PRSS3P2Q8NHM4 247 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 KIR2DL4Q99706 377 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 CHCHD7Q9BUK0 85 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 TRAV8-6A0A0B4J262 113 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 IGHV1-24A0A0C4DH33 117 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 TMEM262E9PQX1 116 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 HSBP1O75506 76 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 JOSD1Q15040 202 aaPredicted RBP9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 PYY3Q5JQD4 70 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 LGALS9CQ6DKI2 356 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 Q8N8P6 123 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 NXT2Q9NPJ8 142 aaKnown RBP9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 AP5S1Q9NUS5 200 aa9.63□□□□□ -0.87
CHRNA1-204ENST00000409323 M0R2N4 97 aa9.62□□□□□ -0.87
CHRNA1-204ENST00000409323 TIRAPP58753 221 aa9.62□□□□□ -0.87
CHRNA1-204ENST00000409323 TMEM243Q9BU79 118 aa9.62□□□□□ -0.87
CHRNA1-204ENST00000409323 Q9H8V8 135 aa9.62□□□□□ -0.87
CHRNA1-204ENST00000409323 SIVA1O15304 175 aa9.61□□□□□ -0.87
CHRNA1-204ENST00000409323 RPL39P62891 51 aaKnown RBP9.61□□□□□ -0.87
CHRNA1-204ENST00000409323 Q8N976 141 aa9.61□□□□□ -0.87
CHRNA1-204ENST00000409323 K7EMI3 77 aa9.6□□□□□ -0.87
CHRNA1-204ENST00000409323 MPV17L2Q567V2 206 aa9.6□□□□□ -0.87
CHRNA1-204ENST00000409323 RNASEKQ6P5S7 137 aaKnown RBP9.6□□□□□ -0.87
CHRNA1-204ENST00000409323 FAM19A2Q8N3H0 131 aa9.6□□□□□ -0.87
CHRNA1-204ENST00000409323 UPK3BQ9BT76 320 aa9.6□□□□□ -0.87
CHRNA1-204ENST00000409323 A0A096LNJ9 63 aa9.59□□□□□ -0.87
CHRNA1-204ENST00000409323 UBE2L6O14933 153 aa9.59□□□□□ -0.87
CHRNA1-204ENST00000409323 PMCHL1Q16048 86 aa9.59□□□□□ -0.87
CHRNA1-204ENST00000409323 TMEM97Q5BJF2 176 aa9.59□□□□□ -0.87
CHRNA1-204ENST00000409323 FA2HQ7L5A8 372 aa9.59□□□□□ -0.87
CHRNA1-204ENST00000409323 BTF3P20290 206 aaKnown RBP9.58□□□□□ -0.88
CHRNA1-204ENST00000409323 CLPSL2Q6UWE3 100 aa9.58□□□□□ -0.88
CHRNA1-204ENST00000409323 KRTAP1-5Q9BYS1 174 aa9.58□□□□□ -0.88
CHRNA1-204ENST00000409323 IGLV4-60A0A075B6I1 120 aa9.57□□□□□ -0.88
CHRNA1-204ENST00000409323 A0A087WX48 190 aa9.57□□□□□ -0.88
CHRNA1-204ENST00000409323 LCE6AA0A183 80 aa9.57□□□□□ -0.88
CHRNA1-204ENST00000409323 LAGE3Q14657 143 aa9.57□□□□□ -0.88
CHRNA1-204ENST00000409323 C12orf57Q99622 126 aa9.57□□□□□ -0.88
CHRNA1-204ENST00000409323 FGF6P10767 208 aa9.56□□□□□ -0.88
CHRNA1-204ENST00000409323 RBX1P62877 108 aa9.56□□□□□ -0.88
CHRNA1-204ENST00000409323 RNASE13Q5GAN3 156 aaKnown RBP9.56□□□□□ -0.88
CHRNA1-204ENST00000409323 AMMECR1LQ6DCA0 310 aa9.56□□□□□ -0.88
CHRNA1-204ENST00000409323 C20orf203Q8NBC4 194 aa9.56□□□□□ -0.88
CHRNA1-204ENST00000409323 DNAH10OSP0CZ25 163 aa9.55□□□□□ -0.88
CHRNA1-204ENST00000409323 LINC01556Q5JQF7 62 aa9.55□□□□□ -0.88
CHRNA1-204ENST00000409323 OPRPNQ99935 248 aaPredicted RBP9.55□□□□□ -0.88
CHRNA1-204ENST00000409323 KLK12Q9UKR0 248 aa9.55□□□□□ -0.88
CHRNA1-204ENST00000409323 IGKV3OR2-268A0A0C4DH90 116 aa9.54□□□□□ -0.88
CHRNA1-204ENST00000409323 LEPROTL1O95214 131 aa9.54□□□□□ -0.88
CHRNA1-204ENST00000409323 ANGP03950 147 aaKnown RBP9.54□□□□□ -0.88
CHRNA1-204ENST00000409323 C2orf66Q6UXQ4 117 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms