RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 CRYBA4P53673 196 aa13.88□□□□□ -0.19
LIMS2-204ENST00000409286 OR11H2Q8NH07 326 aa13.88□□□□□ -0.19
LIMS2-204ENST00000409286 C11orf86A6NJI1 115 aa13.87□□□□□ -0.19
LIMS2-204ENST00000409286 CHCHD7Q9BUK0 85 aa13.87□□□□□ -0.19
LIMS2-204ENST00000409286 TTTY13Q9BZ97 58 aa13.87□□□□□ -0.19
LIMS2-204ENST00000409286 ZMAT5Q9UDW3 170 aaKnown RBP13.87□□□□□ -0.19
LIMS2-204ENST00000409286 IGLV4-3A0A075B6K6 122 aa13.86□□□□□ -0.19
LIMS2-204ENST00000409286 TRBV25-1A0A075B6N4 114 aa13.86□□□□□ -0.19
LIMS2-204ENST00000409286 TRAV8-6A0A0B4J262 113 aa13.86□□□□□ -0.19
LIMS2-204ENST00000409286 COTL1Q14019 142 aa13.86□□□□□ -0.19
LIMS2-204ENST00000409286 NFE4Q86UQ8 179 aa13.86□□□□□ -0.19
LIMS2-204ENST00000409286 MAPKAPK5-AS1Q8N8E1 139 aa13.86□□□□□ -0.19
LIMS2-204ENST00000409286 VCX2Q9H322 139 aa13.86□□□□□ -0.19
LIMS2-204ENST00000409286 FLNBO75369 2602 aaKnown RBP13.86□□□□□ -0.19
LIMS2-204ENST00000409286 K7EQD1 137 aa13.85□□□□□ -0.19
LIMS2-204ENST00000409286 HERVK_113P61574 105 aa13.85□□□□□ -0.19
LIMS2-204ENST00000409286 ORAOV1Q8WV07 137 aa13.85□□□□□ -0.19
LIMS2-204ENST00000409286 OPRPNQ99935 248 aaPredicted RBP13.85□□□□□ -0.19
LIMS2-204ENST00000409286 COX11Q9Y6N1 276 aa13.85□□□□□ -0.19
LIMS2-204ENST00000409286 TRBV7-3A0A075B6L6 115 aa13.85□□□□□ -0.19
LIMS2-204ENST00000409286 SPATA3Q8NHX4 192 aa13.85□□□□□ -0.19
LIMS2-204ENST00000409286 SPANXA1Q9NS26 97 aa13.85□□□□□ -0.19
LIMS2-204ENST00000409286 F8P00451 2351 aa13.84□□□□□ -0.19
LIMS2-204ENST00000409286 RPL36AP83881 106 aaKnown RBP13.84□□□□□ -0.19
LIMS2-204ENST00000409286 GAGE1Q13065 139 aa13.84□□□□□ -0.19
LIMS2-204ENST00000409286 ZNRF2Q8NHG8 242 aa13.84□□□□□ -0.19
LIMS2-204ENST00000409286 RPL36ALQ969Q0 106 aaKnown RBP13.84□□□□□ -0.19
LIMS2-204ENST00000409286 PRADC1Q9BSG0 188 aa13.84□□□□□ -0.19
LIMS2-204ENST00000409286 CHAC1Q9BUX1 264 aa13.84□□□□□ -0.19
LIMS2-204ENST00000409286 MYMXA0A1B0GTQ4 84 aa13.83□□□□□ -0.2
LIMS2-204ENST00000409286 WFDC9Q8NEX5 89 aa13.83□□□□□ -0.2
LIMS2-204ENST00000409286 PHLDA1Q8WV24 401 aaPredicted RBP13.83□□□□□ -0.2
LIMS2-204ENST00000409286 AMELXQ99217 191 aa13.83□□□□□ -0.2
LIMS2-204ENST00000409286 GAGE12BA1L429 117 aa13.82□□□□□ -0.2
LIMS2-204ENST00000409286 TAX1BP3O14907 124 aa13.82□□□□□ -0.2
LIMS2-204ENST00000409286 GAGE7O76087 117 aa13.82□□□□□ -0.2
LIMS2-204ENST00000409286 GAGE12FP0CL80 117 aa13.82□□□□□ -0.2
LIMS2-204ENST00000409286 GAGE12GP0CL81 117 aa13.82□□□□□ -0.2
LIMS2-204ENST00000409286 GAGE12IP0CL82 117 aa13.82□□□□□ -0.2
LIMS2-204ENST00000409286 EMP1P54849 157 aa13.82□□□□□ -0.2
LIMS2-204ENST00000409286 LINC00469Q8N7U9 141 aa13.82□□□□□ -0.2
LIMS2-204ENST00000409286 TRGV2A0A075B6R0 118 aa13.82□□□□□ -0.2
LIMS2-204ENST00000409286 IGHV3-38A0A0C4DH36 116 aa13.82□□□□□ -0.2
LIMS2-204ENST00000409286 A6NDN8 102 aa13.82□□□□□ -0.2
LIMS2-204ENST00000409286 DAZ4Q86SG3 579 aaKnown RBP13.82□□□□□ -0.2
LIMS2-204ENST00000409286 FAM104AQ969W3 186 aa13.82□□□□□ -0.2
LIMS2-204ENST00000409286 DAZ3Q9NR90 486 aaKnown RBP13.82□□□□□ -0.2
LIMS2-204ENST00000409286 TAL2Q16559 108 aa13.81□□□□□ -0.2
LIMS2-204ENST00000409286 SLC25A29Q8N8R3 303 aa13.81□□□□□ -0.2
LIMS2-204ENST00000409286 UBE2D4Q9Y2X8 147 aa13.81□□□□□ -0.2
LIMS2-204ENST00000409286 SMIM9A6NGZ8 99 aa13.8□□□□□ -0.2
LIMS2-204ENST00000409286 TMEM170BQ5T4T1 132 aa13.8□□□□□ -0.2
LIMS2-204ENST00000409286 UBE2D3P61077 147 aa13.79□□□□□ -0.2
LIMS2-204ENST00000409286 UBE2D2P62837 147 aa13.79□□□□□ -0.2
LIMS2-204ENST00000409286 TIMM21Q9BVV7 248 aa13.79□□□□□ -0.2
LIMS2-204ENST00000409286 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-204ENST00000409286 TRBV6-4A0A1B0GX49 114 aa13.79□□□□□ -0.2
LIMS2-204ENST00000409286 IGKV2-29A2NJV5 120 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-204ENST00000409286 KIR2DL5BQ8NHK3 375 aa13.78□□□□□ -0.2
LIMS2-204ENST00000409286 WIPF1O43516 503 aa13.77□□□□□ -0.21
LIMS2-204ENST00000409286 MRPS36P82909 103 aaKnown RBP13.77□□□□□ -0.21
LIMS2-204ENST00000409286 Q6ZVH6 145 aa13.77□□□□□ -0.21
LIMS2-204ENST00000409286 TM2D2Q9BX73 214 aa13.77□□□□□ -0.21
LIMS2-204ENST00000409286 NOTCH3Q9UM47 2321 aa13.77□□□□□ -0.21
LIMS2-204ENST00000409286 A0A0J9YXV3 536 aa13.76□□□□□ -0.21
LIMS2-204ENST00000409286 TMEM223A0PJW6 202 aa13.76□□□□□ -0.21
LIMS2-204ENST00000409286 H3BRM9 83 aa13.76□□□□□ -0.21
LIMS2-204ENST00000409286 CEMP1Q6PRD7 247 aaPredicted RBP13.76□□□□□ -0.21
LIMS2-204ENST00000409286 LINC00612Q8N6U2 182 aa13.76□□□□□ -0.21
LIMS2-204ENST00000409286 TRGV4A0A0C4DH28 118 aa13.75□□□□□ -0.21
LIMS2-204ENST00000409286 GAGE12JA6NER3 117 aa13.75□□□□□ -0.21
LIMS2-204ENST00000409286 ZNF815PA8K554 130 aa13.75□□□□□ -0.21
LIMS2-204ENST00000409286 ZNF22P17026 224 aaPredicted RBP13.75□□□□□ -0.21
LIMS2-204ENST00000409286 GCSHP23434 173 aa13.75□□□□□ -0.21
LIMS2-204ENST00000409286 GAGE4Q13068 117 aa13.75□□□□□ -0.21
LIMS2-204ENST00000409286 GAGE5Q13069 117 aa13.75□□□□□ -0.21
LIMS2-204ENST00000409286 GAGE13Q4V321 117 aa13.75□□□□□ -0.21
LIMS2-204ENST00000409286 CEND1Q8N111 149 aa13.75□□□□□ -0.21
LIMS2-204ENST00000409286 X6R8D5 127 aa13.75□□□□□ -0.21
LIMS2-204ENST00000409286 GTSF1LQ9H1H1 148 aa13.75□□□□□ -0.21
LIMS2-204ENST00000409286 TENM1Q9UKZ4 2725 aa13.74□□□□□ -0.21
LIMS2-204ENST00000409286 LEPROTO15243 131 aa13.74□□□□□ -0.21
LIMS2-204ENST00000409286 APOC4P55056 127 aa13.74□□□□□ -0.21
LIMS2-204ENST00000409286 FHL2Q14192 279 aa13.74□□□□□ -0.21
LIMS2-204ENST00000409286 TEP1Q99973 2627 aaKnown RBP13.74□□□□□ -0.21
LIMS2-204ENST00000409286 SMAGPQ0VAQ4 97 aa13.73□□□□□ -0.21
LIMS2-204ENST00000409286 VWFP04275 2813 aa13.73□□□□□ -0.21
LIMS2-204ENST00000409286 TINCRA0A1B0GVN0 87 aa13.72□□□□□ -0.21
LIMS2-204ENST00000409286 NTM-AS1Q6ZSK4 140 aa13.72□□□□□ -0.21
LIMS2-204ENST00000409286 HIST1H4GQ99525 98 aa13.72□□□□□ -0.21
LIMS2-204ENST00000409286 J3QQQ9 107 aa13.72□□□□□ -0.21
LIMS2-204ENST00000409286 FXYD2P54710 66 aa13.72□□□□□ -0.21
LIMS2-204ENST00000409286 DGAT2L7PQ6IED9 249 aa13.72□□□□□ -0.21
LIMS2-204ENST00000409286 Q6ZUT4 128 aa13.72□□□□□ -0.21
LIMS2-204ENST00000409286 SBSPONQ8IVN8 264 aa13.72□□□□□ -0.21
LIMS2-204ENST00000409286 CSDC2Q9Y534 153 aaKnown RBP13.72□□□□□ -0.21
LIMS2-204ENST00000409286 ATRQ13535 2644 aa13.71□□□□□ -0.21
LIMS2-204ENST00000409286 SMIM13P0DJ93 91 aa13.71□□□□□ -0.21
LIMS2-204ENST00000409286 PLEKHB2Q96CS7 222 aa13.71□□□□□ -0.21
LIMS2-204ENST00000409286 LGALS3P17931 250 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms