RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 TRBV6-8A0A0A6YYG3 113 aa14.09□□□□□ -0.15
VSX1-203ENST00000409285 K7EMI3 77 aa14.09□□□□□ -0.15
VSX1-203ENST00000409285 LELP1Q5T871 98 aa14.09□□□□□ -0.15
VSX1-203ENST00000409285 NTM-AS1Q6ZSK4 140 aa14.09□□□□□ -0.15
VSX1-203ENST00000409285 Q8N8P6 123 aa14.09□□□□□ -0.15
VSX1-203ENST00000409285 TSHBP01222 138 aa14.08□□□□□ -0.16
VSX1-203ENST00000409285 IQCJQ1A5X6 159 aa14.08□□□□□ -0.16
VSX1-203ENST00000409285 UPK3BQ9BT76 320 aa14.07□□□□□ -0.16
VSX1-203ENST00000409285 MRPS16Q9Y3D3 137 aaKnown RBP14.07□□□□□ -0.16
VSX1-203ENST00000409285 LINC00588Q9Y4M8 146 aa14.07□□□□□ -0.16
VSX1-203ENST00000409285 LINC01546A6NGU7 62 aa14.06□□□□□ -0.16
VSX1-203ENST00000409285 VPS13DQ5THJ4 4388 aa14.06□□□□□ -0.16
VSX1-203ENST00000409285 DNAH1Q9P2D7 4330 aa14.06□□□□□ -0.16
VSX1-203ENST00000409285 TRBV25-1A0A075B6N4 114 aa14.06□□□□□ -0.16
VSX1-203ENST00000409285 IGHV1-24A0A0C4DH33 117 aa14.06□□□□□ -0.16
VSX1-203ENST00000409285 LOC389332A0A1B0GUA5 103 aa14.06□□□□□ -0.16
VSX1-203ENST00000409285 IFI27P40305 119 aaPredicted RBP14.06□□□□□ -0.16
VSX1-203ENST00000409285 Q0VG73 95 aa14.05□□□□□ -0.16
VSX1-203ENST00000409285 BAGE3Q86Y29 109 aa14.05□□□□□ -0.16
VSX1-203ENST00000409285 ALMS1Q8TCU4 4167 aa14.04□□□□□ -0.16
VSX1-203ENST00000409285 S100A6P06703 90 aa14.04□□□□□ -0.16
VSX1-203ENST00000409285 ESDP10768 282 aa14.04□□□□□ -0.16
VSX1-203ENST00000409285 FCER1GP30273 86 aa14.04□□□□□ -0.16
VSX1-203ENST00000409285 NDUFA6P56556 154 aa14.04□□□□□ -0.16
VSX1-203ENST00000409285 LGALS9CQ6DKI2 356 aa14.04□□□□□ -0.16
VSX1-203ENST00000409285 PRSS3P2Q8NHM4 247 aa14.04□□□□□ -0.16
VSX1-203ENST00000409285 AMTP48728 403 aa14.03□□□□□ -0.16
VSX1-203ENST00000409285 TRAV8-6A0A0B4J262 113 aa14.02□□□□□ -0.16
VSX1-203ENST00000409285 TMEM243Q9BU79 118 aa14.02□□□□□ -0.16
VSX1-203ENST00000409285 CHCHD7Q9BUK0 85 aa14.02□□□□□ -0.16
VSX1-203ENST00000409285 H7C423 109 aa14.01□□□□□ -0.17
VSX1-203ENST00000409285 ORMDL2Q53FV1 153 aa14.01□□□□□ -0.17
VSX1-203ENST00000409285 SACSQ9NZJ4 4579 aa14.01□□□□□ -0.17
VSX1-203ENST00000409285 PKIAP61925 76 aa14□□□□□ -0.17
VSX1-203ENST00000409285 LAGE3Q14657 143 aa14□□□□□ -0.17
VSX1-203ENST00000409285 UBE2DNLQ8IWF7 75 aa14□□□□□ -0.17
VSX1-203ENST00000409285 URB1-AS1Q96HZ7 61 aa14□□□□□ -0.17
VSX1-203ENST00000409285 AP5S1Q9NUS5 200 aa14□□□□□ -0.17
VSX1-203ENST00000409285 LINC00614P0C842 121 aa13.99□□□□□ -0.17
VSX1-203ENST00000409285 FA2HQ7L5A8 372 aa13.99□□□□□ -0.17
VSX1-203ENST00000409285 DEFB104AQ8WTQ1 72 aa13.99□□□□□ -0.17
VSX1-203ENST00000409285 RNASEKQ6P5S7 137 aaKnown RBP13.99□□□□□ -0.17
VSX1-203ENST00000409285 NIT1Q86X76 327 aa13.99□□□□□ -0.17
VSX1-203ENST00000409285 WFDC10BQ8IUB3 73 aa13.99□□□□□ -0.17
VSX1-203ENST00000409285 C20orf203Q8NBC4 194 aa13.99□□□□□ -0.17
VSX1-203ENST00000409285 LINC00476Q8WZB0 136 aa13.99□□□□□ -0.17
VSX1-203ENST00000409285 CHCHD1Q96BP2 118 aaKnown RBP13.99□□□□□ -0.17
VSX1-203ENST00000409285 SERF1AO75920 110 aa13.98□□□□□ -0.17
VSX1-203ENST00000409285 COA6Q5JTJ3 125 aaKnown RBP13.98□□□□□ -0.17
VSX1-203ENST00000409285 CHCHD5Q9BSY4 110 aa13.98□□□□□ -0.17
VSX1-203ENST00000409285 DNAH10OSP0CZ25 163 aa13.97□□□□□ -0.17
VSX1-203ENST00000409285 G0S2P27469 103 aa13.97□□□□□ -0.17
VSX1-203ENST00000409285 SIVA1O15304 175 aa13.96□□□□□ -0.17
VSX1-203ENST00000409285 LINC01556Q5JQF7 62 aa13.96□□□□□ -0.17
VSX1-203ENST00000409285 TMEM18Q96B42 140 aa13.96□□□□□ -0.17
VSX1-203ENST00000409285 DNAH6Q9C0G6 4158 aa13.95□□□□□ -0.18
VSX1-203ENST00000409285 KMT2AQ03164 3969 aa13.95□□□□□ -0.18
VSX1-203ENST00000409285 UBE2L6O14933 153 aa13.95□□□□□ -0.18
VSX1-203ENST00000409285 LINC00310P59036 64 aa13.95□□□□□ -0.18
VSX1-203ENST00000409285 SNRPEP62304 92 aaKnown RBP13.95□□□□□ -0.18
VSX1-203ENST00000409285 MRPL52Q86TS9 123 aaKnown RBP13.95□□□□□ -0.18
VSX1-203ENST00000409285 A0A1B0GUV1 79 aa13.94□□□□□ -0.18
VSX1-203ENST00000409285 LINC01549A6NIU2 74 aa13.94□□□□□ -0.18
VSX1-203ENST00000409285 K7EP13 123 aa13.94□□□□□ -0.18
VSX1-203ENST00000409285 ZNF25P17030 456 aaPredicted RBP13.94□□□□□ -0.18
VSX1-203ENST00000409285 SMAGPQ0VAQ4 97 aa13.94□□□□□ -0.18
VSX1-203ENST00000409285 Q9H8V8 135 aa13.94□□□□□ -0.18
VSX1-203ENST00000409285 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.93□□□□□ -0.18
VSX1-203ENST00000409285 LCE6AA0A183 80 aa13.93□□□□□ -0.18
VSX1-203ENST00000409285 IGKV2-29A2NJV5 120 aaPredicted RBP13.93□□□□□ -0.18
VSX1-203ENST00000409285 TIMM21Q9BVV7 248 aa13.93□□□□□ -0.18
VSX1-203ENST00000409285 CSDC2Q9Y534 153 aaKnown RBP13.93□□□□□ -0.18
VSX1-203ENST00000409285 C5orf52A6NGY3 159 aa13.93□□□□□ -0.18
VSX1-203ENST00000409285 NUPR1O60356 82 aa13.93□□□□□ -0.18
VSX1-203ENST00000409285 GAGE6Q13070 117 aa13.93□□□□□ -0.18
VSX1-203ENST00000409285 PDZD11Q5EBL8 140 aa13.93□□□□□ -0.18
VSX1-203ENST00000409285 CYSLTR1Q9Y271 337 aa13.93□□□□□ -0.18
VSX1-203ENST00000409285 A0A087WX48 190 aa13.92□□□□□ -0.18
VSX1-203ENST00000409285 HSBP1O75506 76 aa13.92□□□□□ -0.18
VSX1-203ENST00000409285 FGF6P10767 208 aa13.92□□□□□ -0.18
VSX1-203ENST00000409285 MPV17L2Q567V2 206 aa13.92□□□□□ -0.18
VSX1-203ENST00000409285 C2orf66Q6UXQ4 117 aa13.92□□□□□ -0.18
VSX1-203ENST00000409285 UBE2D4Q9Y2X8 147 aa13.92□□□□□ -0.18
VSX1-203ENST00000409285 A0A096LNJ9 63 aa13.91□□□□□ -0.18
VSX1-203ENST00000409285 RPL39P62891 51 aaKnown RBP13.91□□□□□ -0.18
VSX1-203ENST00000409285 TOMM6Q96B49 74 aa13.91□□□□□ -0.18
VSX1-203ENST00000409285 PYGO1Q9Y3Y4 419 aa13.91□□□□□ -0.18
VSX1-203ENST00000409285 BTF3P20290 206 aaKnown RBP13.9□□□□□ -0.18
VSX1-203ENST00000409285 RBX1P62877 108 aa13.9□□□□□ -0.18
VSX1-203ENST00000409285 SPANXA1Q9NS26 97 aa13.9□□□□□ -0.18
VSX1-203ENST00000409285 RYR3Q15413 4870 aa13.9□□□□□ -0.18
VSX1-203ENST00000409285 TMEM262E9PQX1 116 aa13.89□□□□□ -0.19
VSX1-203ENST00000409285 LY6G6CO95867 125 aa13.89□□□□□ -0.19
VSX1-203ENST00000409285 HBDP02042 147 aa13.89□□□□□ -0.19
VSX1-203ENST00000409285 NPSP0C0P6 89 aa13.89□□□□□ -0.19
VSX1-203ENST00000409285 HIST3H2BBQ8N257 126 aa13.89□□□□□ -0.19
VSX1-203ENST00000409285 S100A2P29034 98 aa13.88□□□□□ -0.19
VSX1-203ENST00000409285 PMCHL1Q16048 86 aa13.88□□□□□ -0.19
VSX1-203ENST00000409285 AMMECR1LQ6DCA0 310 aa13.88□□□□□ -0.19
VSX1-203ENST00000409285 Q8N3U1 123 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms