RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 FAM223AQ8IWN6 122 aa6.19□□□□□ -1.42
SNX13-201ENST00000409076 M0R2P5 195 aa6.19□□□□□ -1.42
SNX13-201ENST00000409076 LYRM7Q5U5X0 104 aa6.19□□□□□ -1.42
SNX13-201ENST00000409076 WFDC10AQ9H1F0 79 aa6.19□□□□□ -1.42
SNX13-201ENST00000409076 RPL13AP40429 203 aaKnown RBP6.18□□□□□ -1.42
SNX13-201ENST00000409076 Q6ZUT4 128 aa6.18□□□□□ -1.42
SNX13-201ENST00000409076 PIFOQ8TCI5 191 aa6.18□□□□□ -1.42
SNX13-201ENST00000409076 PFN2P35080 140 aa6.18□□□□□ -1.42
SNX13-201ENST00000409076 ZMAT4Q9H898 229 aa6.18□□□□□ -1.42
SNX13-201ENST00000409076 IGLV4-69A0A075B6H9 119 aa6.18□□□□□ -1.42
SNX13-201ENST00000409076 TRAV8-4A0A0B4J246 113 aa6.18□□□□□ -1.42
SNX13-201ENST00000409076 FLNBO75369 2602 aaKnown RBP6.18□□□□□ -1.42
SNX13-201ENST00000409076 FHL3Q13643 280 aa6.18□□□□□ -1.42
SNX13-201ENST00000409076 GAGE2BQ13066 116 aa6.17□□□□□ -1.42
SNX13-201ENST00000409076 GAGE2EQ4V326 116 aa6.17□□□□□ -1.42
SNX13-201ENST00000409076 C10orf126Q8N4M7 172 aa6.17□□□□□ -1.42
SNX13-201ENST00000409076 GAGE2DQ9UEU5 116 aa6.17□□□□□ -1.42
SNX13-201ENST00000409076 TRGV2A0A075B6R0 118 aa6.17□□□□□ -1.42
SNX13-201ENST00000409076 TMEM262E9PQX1 116 aa6.17□□□□□ -1.42
SNX13-201ENST00000409076 IGHV3-30-3P0DP02 117 aa6.17□□□□□ -1.42
SNX13-201ENST00000409076 PPDPFLQ8WWR9 84 aa6.17□□□□□ -1.42
SNX13-201ENST00000409076 ATRQ13535 2644 aa6.17□□□□□ -1.42
SNX13-201ENST00000409076 ZFAND6Q6FIF0 208 aa6.17□□□□□ -1.42
SNX13-201ENST00000409076 CARD19Q96LW7 228 aa6.17□□□□□ -1.42
SNX13-201ENST00000409076 I3L3M4 83 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 ZNF22P17026 224 aaPredicted RBP6.16□□□□□ -1.42
SNX13-201ENST00000409076 Q6ZSN1 163 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 TMEM61Q8N0U2 210 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 DEFB130BP0DP73 79 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 DEFB130AP0DP74 79 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 EBI3Q14213 229 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 NSUN5P1Q3KNT7 163 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 CFAP126Q5VTH2 177 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 C15orf53Q8NAA6 179 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 ZNF48Q96MX3 618 aaPredicted RBP6.16□□□□□ -1.42
SNX13-201ENST00000409076 CNFNQ9BYD5 112 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 Q9HAA7 133 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 UBR5O95071 2799 aaPredicted RBP6.16□□□□□ -1.42
SNX13-201ENST00000409076 TRAV4A0A0B4J268 109 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 CRLF1O75462 422 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 GAGE7O76087 117 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 COX6CP09669 75 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 GAGE12FP0CL80 117 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 GAGE12GP0CL81 117 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 GAGE12IP0CL82 117 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 HTN3P15516 51 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 NBL1P41271 181 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 PRIMA1Q86XR5 153 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 Q9H8V8 135 aa6.16□□□□□ -1.42
SNX13-201ENST00000409076 RHODO00212 210 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 ADAMTSL4-AS1Q5T5F5 129 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 USMG5Q96IX5 58 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 LINC00467Q9BRT7 94 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 CDKN2A-AS1Q9UH64 79 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 U3KQE9 123 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 UBE2L6O14933 153 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 DEFB4AO15263 64 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 TRIAP1O43715 76 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 EIF4EBP3O60516 100 aaPredicted RBP6.15□□□□□ -1.42
SNX13-201ENST00000409076 NXPH4O95158 308 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 IGHV3-30P01768 117 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 IGHV3-30-5P0DP03 117 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 GAGE6Q13070 117 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 C19orf54Q5BKX5 351 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 TEN1Q86WV5 123 aa6.15□□□□□ -1.42
SNX13-201ENST00000409076 IGLV4-3A0A075B6K6 122 aa6.15□□□□□ -1.43
SNX13-201ENST00000409076 TRAV12-1A0A0B4J245 112 aa6.15□□□□□ -1.43
SNX13-201ENST00000409076 UCNP55089 124 aa6.15□□□□□ -1.43
SNX13-201ENST00000409076 WFDC11Q8NEX6 87 aa6.15□□□□□ -1.43
SNX13-201ENST00000409076 TMEM141Q96I45 108 aa6.15□□□□□ -1.43
SNX13-201ENST00000409076 A0A0J9YX75 114 aa6.14□□□□□ -1.43
SNX13-201ENST00000409076 A0A0J9YXY3 114 aa6.14□□□□□ -1.43
SNX13-201ENST00000409076 M0QY20 66 aa6.14□□□□□ -1.43
SNX13-201ENST00000409076 IGHG2P01859 326 aa6.14□□□□□ -1.43
SNX13-201ENST00000409076 PIK3CD-AS1Q5SR53 167 aa6.14□□□□□ -1.43
SNX13-201ENST00000409076 MRPL53Q96EL3 112 aaKnown RBP6.14□□□□□ -1.43
SNX13-201ENST00000409076 B4DSR2 109 aa6.14□□□□□ -1.43
SNX13-201ENST00000409076 RBMY1A1P0DJD3 496 aaKnown RBP6.14□□□□□ -1.43
SNX13-201ENST00000409076 RBMY1CP0DJD4 496 aa6.14□□□□□ -1.43
SNX13-201ENST00000409076 RBMY1FQ15415 496 aaKnown RBP6.14□□□□□ -1.43
SNX13-201ENST00000409076 TAL2Q16559 108 aa6.14□□□□□ -1.43
SNX13-201ENST00000409076 STHQ8IWL8 128 aa6.14□□□□□ -1.43
SNX13-201ENST00000409076 SPATA25Q9BR10 227 aa6.14□□□□□ -1.43
SNX13-201ENST00000409076 C20orf203Q8NBC4 194 aa6.14□□□□□ -1.43
SNX13-201ENST00000409076 APCP25054 2843 aa6.14□□□□□ -1.43
SNX13-201ENST00000409076 TEP1Q99973 2627 aaKnown RBP6.13□□□□□ -1.43
SNX13-201ENST00000409076 LOC100131303A0A0U1RQF7 123 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 IGIPA6NJ69 53 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 SCGB1A1P11684 91 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 LINC00158P58513 81 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 LINC01620Q4KN68 170 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 C10orf105Q8TEF2 133 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 PSMG3-AS1Q96PY0 264 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 NOP10Q9NPE3 64 aaKnown RBP6.13□□□□□ -1.43
SNX13-201ENST00000409076 H3BMM0 161 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 POLR2KP53803 58 aaKnown RBP6.13□□□□□ -1.43
SNX13-201ENST00000409076 KRTAP10-9P60411 292 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 ATXN8Q156A1 80 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 PAPPA-AS1Q5QFB9 102 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 C5orf38Q86SI9 138 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms