RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 TNRC6BQ9UPQ9 1833 aaKnown RBP11.87□□□□□ -0.51
SSFA2-202ENST00000409001 IGHV4-4A0A075B6R2 117 aa11.86□□□□□ -0.51
SSFA2-202ENST00000409001 K7EQG2 157 aa11.86□□□□□ -0.51
SSFA2-202ENST00000409001 TRACP01848 142 aa11.86□□□□□ -0.51
SSFA2-202ENST00000409001 C2orf91Q6ZV80 131 aa11.86□□□□□ -0.51
SSFA2-202ENST00000409001 C11orf21Q9P2W6 132 aa11.86□□□□□ -0.51
SSFA2-202ENST00000409001 A0A0J9YXY3 114 aa11.86□□□□□ -0.51
SSFA2-202ENST00000409001 COX7A2LO14548 114 aa11.86□□□□□ -0.51
SSFA2-202ENST00000409001 IGKV2D-24A0A075B6R9 120 aa11.86□□□□□ -0.51
SSFA2-202ENST00000409001 IGKV3D-7A0A0C4DH55 119 aa11.86□□□□□ -0.51
SSFA2-202ENST00000409001 MAP6D1Q9H9H5 199 aa11.85□□□□□ -0.51
SSFA2-202ENST00000409001 HHLA3Q9XRX5 114 aa11.85□□□□□ -0.51
SSFA2-202ENST00000409001 LECT2O14960 151 aa11.85□□□□□ -0.51
SSFA2-202ENST00000409001 NFE4Q86UQ8 179 aa11.85□□□□□ -0.51
SSFA2-202ENST00000409001 FN1P02751 2386 aaKnown RBP11.85□□□□□ -0.51
SSFA2-202ENST00000409001 H3BT86 120 aa11.85□□□□□ -0.51
SSFA2-202ENST00000409001 CITED2Q99967 270 aaPredicted RBP11.85□□□□□ -0.51
SSFA2-202ENST00000409001 FAM236AA0A1B0GUQ0 79 aa11.84□□□□□ -0.51
SSFA2-202ENST00000409001 FAM236BA0A1B0GV22 79 aa11.84□□□□□ -0.51
SSFA2-202ENST00000409001 Q9HAA7 133 aa11.84□□□□□ -0.51
SSFA2-202ENST00000409001 PKD1L2Q7Z442 2459 aa11.84□□□□□ -0.51
SSFA2-202ENST00000409001 DEFB4AO15263 64 aa11.84□□□□□ -0.51
SSFA2-202ENST00000409001 C10orf99Q6UWK7 81 aa11.84□□□□□ -0.51
SSFA2-202ENST00000409001 SPTBN4Q9H254 2564 aa11.83□□□□□ -0.52
SSFA2-202ENST00000409001 ATP5G1P05496 136 aa11.83□□□□□ -0.52
SSFA2-202ENST00000409001 LRP4O75096 1905 aa11.83□□□□□ -0.52
SSFA2-202ENST00000409001 CDKN2A-AS1Q9UH64 79 aa11.83□□□□□ -0.52
SSFA2-202ENST00000409001 C4orf3Q8WVX3 66 aa11.83□□□□□ -0.52
SSFA2-202ENST00000409001 MRPL23Q16540 153 aaKnown RBP11.82□□□□□ -0.52
SSFA2-202ENST00000409001 Q6ZTI0 123 aa11.82□□□□□ -0.52
SSFA2-202ENST00000409001 ZNF22P17026 224 aaPredicted RBP11.82□□□□□ -0.52
SSFA2-202ENST00000409001 RBX1P62877 108 aa11.82□□□□□ -0.52
SSFA2-202ENST00000409001 MIAQ16674 131 aa11.82□□□□□ -0.52
SSFA2-202ENST00000409001 C11orf71Q6IPW1 123 aa11.82□□□□□ -0.52
SSFA2-202ENST00000409001 Q8N976 141 aa11.82□□□□□ -0.52
SSFA2-202ENST00000409001 TMEM263Q8WUH6 116 aaKnown RBP11.82□□□□□ -0.52
SSFA2-202ENST00000409001 URB1-AS1Q96HZ7 61 aa11.82□□□□□ -0.52
SSFA2-202ENST00000409001 A0A0B4J2C4 111 aa11.81□□□□□ -0.52
SSFA2-202ENST00000409001 PRR9Q5T870 116 aa11.81□□□□□ -0.52
SSFA2-202ENST00000409001 SPANXB1Q9NS25 103 aaPredicted RBP11.81□□□□□ -0.52
SSFA2-202ENST00000409001 TRBV10-1A0A0K0K1A3 114 aa11.81□□□□□ -0.52
SSFA2-202ENST00000409001 RBMY1FQ15415 496 aaKnown RBP11.81□□□□□ -0.52
SSFA2-202ENST00000409001 Q8N6K4 173 aa11.81□□□□□ -0.52
SSFA2-202ENST00000409001 NRACQ8N912 160 aa11.81□□□□□ -0.52
SSFA2-202ENST00000409001 DEFB105AQ8NG35 78 aa11.81□□□□□ -0.52
SSFA2-202ENST00000409001 IGLV4-3A0A075B6K6 122 aa11.81□□□□□ -0.52
SSFA2-202ENST00000409001 CAMK2N2Q96S95 79 aa11.81□□□□□ -0.52
SSFA2-202ENST00000409001 IGHV3-30P01768 117 aa11.81□□□□□ -0.52
SSFA2-202ENST00000409001 IGHV3-33P01772 117 aa11.81□□□□□ -0.52
SSFA2-202ENST00000409001 IGHV3-30-5P0DP03 117 aa11.81□□□□□ -0.52
SSFA2-202ENST00000409001 M0QY20 66 aa11.8□□□□□ -0.52
SSFA2-202ENST00000409001 SPART-AS1P0CW21 52 aa11.8□□□□□ -0.52
SSFA2-202ENST00000409001 LINC00467Q9BRT7 94 aa11.8□□□□□ -0.52
SSFA2-202ENST00000409001 CDK2AP2O75956 126 aa11.8□□□□□ -0.52
SSFA2-202ENST00000409001 DEFB135Q30KP9 77 aa11.8□□□□□ -0.52
SSFA2-202ENST00000409001 ODF3Q96PU9 254 aa11.8□□□□□ -0.52
SSFA2-202ENST00000409001 C1orf43Q9BWL3 253 aa11.8□□□□□ -0.52
SSFA2-202ENST00000409001 SMIM20Q8N5G0 67 aa11.8□□□□□ -0.52
SSFA2-202ENST00000409001 PRRC2AP48634 2157 aaKnown RBP11.8□□□□□ -0.52
SSFA2-202ENST00000409001 TRAV26-1A0A087WT03 109 aa11.79□□□□□ -0.52
SSFA2-202ENST00000409001 C9orf66Q5T8R8 295 aa11.79□□□□□ -0.52
SSFA2-202ENST00000409001 RNASE3P12724 160 aaKnown RBP11.79□□□□□ -0.52
SSFA2-202ENST00000409001 PROK1P58294 105 aa11.78□□□□□ -0.52
SSFA2-202ENST00000409001 TEX49A0A1B0GTD5 131 aa11.78□□□□□ -0.52
SSFA2-202ENST00000409001 MT-ATP8P03928 68 aa11.78□□□□□ -0.52
SSFA2-202ENST00000409001 A0A1B0GX51 115 aa11.78□□□□□ -0.52
SSFA2-202ENST00000409001 TMEM223A0PJW6 202 aa11.77□□□□□ -0.53
SSFA2-202ENST00000409001 hADV29S1A0JD25 119 aa11.77□□□□□ -0.53
SSFA2-202ENST00000409001 TRBV27A0A0K0K1C4 114 aa11.76□□□□□ -0.53
SSFA2-202ENST00000409001 CDSNQ15517 529 aa11.76□□□□□ -0.53
SSFA2-202ENST00000409001 NCR3O14931 201 aa11.76□□□□□ -0.53
SSFA2-202ENST00000409001 KLK12Q9UKR0 248 aa11.76□□□□□ -0.53
SSFA2-202ENST00000409001 DEFB114Q30KQ6 69 aa11.75□□□□□ -0.53
SSFA2-202ENST00000409001 Q6ZS46 218 aa11.75□□□□□ -0.53
SSFA2-202ENST00000409001 DNAJC9-AS1A6NH13 148 aa11.75□□□□□ -0.53
SSFA2-202ENST00000409001 SPAG11BQ08648 103 aa11.75□□□□□ -0.53
SSFA2-202ENST00000409001 PRO0255Q9UI72 69 aa11.75□□□□□ -0.53
SSFA2-202ENST00000409001 MRAPQ8TCY5 172 aa11.74□□□□□ -0.53
SSFA2-202ENST00000409001 CLPSL1A2RUU4 121 aa11.74□□□□□ -0.53
SSFA2-202ENST00000409001 A8MZ25 164 aa11.74□□□□□ -0.53
SSFA2-202ENST00000409001 HIST2H2BDQ6DRA6 164 aa11.74□□□□□ -0.53
SSFA2-202ENST00000409001 RMI2Q96E14 147 aa11.74□□□□□ -0.53
SSFA2-202ENST00000409001 MTORP42345 2549 aa11.73□□□□□ -0.53
SSFA2-202ENST00000409001 MRPS12O15235 138 aaKnown RBP11.73□□□□□ -0.53
SSFA2-202ENST00000409001 Q6YL49 198 aa11.73□□□□□ -0.53
SSFA2-202ENST00000409001 ATOX1O00244 68 aa11.73□□□□□ -0.53
SSFA2-202ENST00000409001 CNFNQ9BYD5 112 aa11.72□□□□□ -0.53
SSFA2-202ENST00000409001 C14orf132Q9NPU4 83 aa11.72□□□□□ -0.53
SSFA2-202ENST00000409001 TRIAP1O43715 76 aa11.72□□□□□ -0.53
SSFA2-202ENST00000409001 RPL18AQ02543 176 aaKnown RBP11.72□□□□□ -0.53
SSFA2-202ENST00000409001 RBM3P98179 157 aaKnown RBP11.72□□□□□ -0.53
SSFA2-202ENST00000409001 CPAMD8Q8IZJ3 1885 aa11.72□□□□□ -0.53
SSFA2-202ENST00000409001 CFAP126Q5VTH2 177 aa11.72□□□□□ -0.53
SSFA2-202ENST00000409001 RNF183Q96D59 192 aa11.72□□□□□ -0.53
SSFA2-202ENST00000409001 LRRK2Q5S007 2527 aa11.72□□□□□ -0.53
SSFA2-202ENST00000409001 PRM2P04554 102 aa11.71□□□□□ -0.53
SSFA2-202ENST00000409001 SPANXCQ9NY87 97 aa11.71□□□□□ -0.53
SSFA2-202ENST00000409001 POLR2KP53803 58 aaKnown RBP11.71□□□□□ -0.53
SSFA2-202ENST00000409001 TRBV6-5A0A0K0K1A5 114 aa11.71□□□□□ -0.53
SSFA2-202ENST00000409001 JMJD7-PLA2G4BH0Y9G9 81 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms