RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 Q6ZUT4 128 aa12.35□□□□□ -0.43
CBX6-202ENST00000407418 C14orf132Q9NPU4 83 aa12.35□□□□□ -0.43
CBX6-202ENST00000407418 CRYGBP07316 175 aa12.35□□□□□ -0.43
CBX6-202ENST00000407418 C10orf99Q6UWK7 81 aa12.35□□□□□ -0.43
CBX6-202ENST00000407418 TRBV6-4A0A1B0GX49 114 aa12.35□□□□□ -0.43
CBX6-202ENST00000407418 ZNF706Q9Y5V0 76 aaPredicted RBP12.35□□□□□ -0.43
CBX6-202ENST00000407418 ZFHX2Q9C0A1 2572 aaPredicted RBP12.34□□□□□ -0.43
CBX6-202ENST00000407418 KPRPQ5T749 579 aaPredicted RBP12.34□□□□□ -0.43
CBX6-202ENST00000407418 SVIPQ8NHG7 77 aa12.34□□□□□ -0.43
CBX6-202ENST00000407418 BRK1Q8WUW1 75 aa12.34□□□□□ -0.43
CBX6-202ENST00000407418 CADP27708 2225 aa12.34□□□□□ -0.43
CBX6-202ENST00000407418 IGKV1D-37A0A075B6S9 117 aa12.34□□□□□ -0.43
CBX6-202ENST00000407418 C20orf173Q96LM9 149 aa12.33□□□□□ -0.44
CBX6-202ENST00000407418 A0A0J9YWU9 116 aa12.33□□□□□ -0.44
CBX6-202ENST00000407418 MIAQ16674 131 aa12.33□□□□□ -0.44
CBX6-202ENST00000407418 FAM19A5Q7Z5A7 132 aaPredicted RBP12.33□□□□□ -0.44
CBX6-202ENST00000407418 JMJD7-PLA2G4BH0Y9G9 81 aa12.32□□□□□ -0.44
CBX6-202ENST00000407418 OXLD1Q5BKU9 147 aa12.32□□□□□ -0.44
CBX6-202ENST00000407418 ZNF106Q9H2Y7 1883 aaKnown RBP12.32□□□□□ -0.44
CBX6-202ENST00000407418 PLA2G2EQ9NZK7 142 aa12.31□□□□□ -0.44
CBX6-202ENST00000407418 TRBV6-8A0A0A6YYG3 113 aa12.31□□□□□ -0.44
CBX6-202ENST00000407418 SYCNQ0VAF6 134 aa12.3□□□□□ -0.44
CBX6-202ENST00000407418 TTTY13Q9BZ97 58 aa12.3□□□□□ -0.44
CBX6-202ENST00000407418 CFAP126Q5VTH2 177 aa12.3□□□□□ -0.44
CBX6-202ENST00000407418 HIST2H2BDQ6DRA6 164 aa12.3□□□□□ -0.44
CBX6-202ENST00000407418 CACNA1HO95180 2353 aa12.3□□□□□ -0.44
CBX6-202ENST00000407418 BBC3Q96PG8 261 aaPredicted RBP12.3□□□□□ -0.44
CBX6-202ENST00000407418 CEP192Q8TEP8 1941 aa12.3□□□□□ -0.44
CBX6-202ENST00000407418 NEXN-AS1Q8NBZ9 246 aa12.3□□□□□ -0.44
CBX6-202ENST00000407418 TMEM256-PLSCR3K7ERE1 68 aa12.29□□□□□ -0.44
CBX6-202ENST00000407418 NUP210LQ5VU65 1888 aa12.29□□□□□ -0.44
CBX6-202ENST00000407418 E9PLD3 99 aa12.29□□□□□ -0.44
CBX6-202ENST00000407418 IGHV4-30-4P0DP06 118 aa12.29□□□□□ -0.44
CBX6-202ENST00000407418 NANOS2P60321 138 aaKnown RBP12.29□□□□□ -0.44
CBX6-202ENST00000407418 LINC00474Q9P2X8 69 aa12.29□□□□□ -0.44
CBX6-202ENST00000407418 UBE2D4Q9Y2X8 147 aa12.29□□□□□ -0.44
CBX6-202ENST00000407418 LECT2O14960 151 aa12.29□□□□□ -0.44
CBX6-202ENST00000407418 KRTAP10-9P60411 292 aa12.29□□□□□ -0.44
CBX6-202ENST00000407418 ZFAND3Q9H8U3 227 aa12.29□□□□□ -0.44
CBX6-202ENST00000407418 C18orf65Q6ZTR6 163 aa12.29□□□□□ -0.44
CBX6-202ENST00000407418 LELP1Q5T871 98 aa12.28□□□□□ -0.44
CBX6-202ENST00000407418 CEMP1Q6PRD7 247 aaPredicted RBP12.28□□□□□ -0.44
CBX6-202ENST00000407418 Q8N976 141 aa12.28□□□□□ -0.44
CBX6-202ENST00000407418 SEC61GP60059 68 aa12.27□□□□□ -0.44
CBX6-202ENST00000407418 U3KQK5 164 aa12.27□□□□□ -0.44
CBX6-202ENST00000407418 MED13Q9UHV7 2174 aa12.27□□□□□ -0.45
CBX6-202ENST00000407418 LINC00467Q9BRT7 94 aa12.27□□□□□ -0.45
CBX6-202ENST00000407418 PDE6GP18545 87 aa12.27□□□□□ -0.45
CBX6-202ENST00000407418 HIVEP2P31629 2446 aa12.26□□□□□ -0.45
CBX6-202ENST00000407418 Q8N6K4 173 aa12.26□□□□□ -0.45
CBX6-202ENST00000407418 IGLV1-40P01703 118 aa12.26□□□□□ -0.45
CBX6-202ENST00000407418 DOPEY2Q9Y3R5 2298 aa12.26□□□□□ -0.45
CBX6-202ENST00000407418 H3BT86 120 aa12.26□□□□□ -0.45
CBX6-202ENST00000407418 LOC107984640A0A0U1RRK4 108 aa12.26□□□□□ -0.45
CBX6-202ENST00000407418 C19orf71A6NCJ1 209 aa12.25□□□□□ -0.45
CBX6-202ENST00000407418 C16orf95Q9H693 158 aa12.25□□□□□ -0.45
CBX6-202ENST00000407418 P0C879 139 aa12.25□□□□□ -0.45
CBX6-202ENST00000407418 ZNF80P51504 273 aaPredicted RBP12.24□□□□□ -0.45
CBX6-202ENST00000407418 PTH2Q96A98 100 aa12.24□□□□□ -0.45
CBX6-202ENST00000407418 CDSNQ15517 529 aa12.24□□□□□ -0.45
CBX6-202ENST00000407418 TCL1BO95988 128 aa12.24□□□□□ -0.45
CBX6-202ENST00000407418 UBE2D3P61077 147 aa12.23□□□□□ -0.45
CBX6-202ENST00000407418 WFDC10AQ9H1F0 79 aa12.23□□□□□ -0.45
CBX6-202ENST00000407418 TNRC6AQ8NDV7 1962 aaKnown RBP12.23□□□□□ -0.45
CBX6-202ENST00000407418 ODF1Q14990 250 aa12.23□□□□□ -0.45
CBX6-202ENST00000407418 CLUHP3Q96NS8 147 aa12.23□□□□□ -0.45
CBX6-202ENST00000407418 UPK3BQ9BT76 320 aa12.23□□□□□ -0.45
CBX6-202ENST00000407418 GDF5OSQ5U4N7 250 aa12.23□□□□□ -0.45
CBX6-202ENST00000407418 PCNX1Q96RV3 2341 aa12.22□□□□□ -0.45
CBX6-202ENST00000407418 C9orf85Q96MD7 179 aa12.22□□□□□ -0.45
CBX6-202ENST00000407418 IGLV4-69A0A075B6H9 119 aa12.22□□□□□ -0.45
CBX6-202ENST00000407418 A0A096LNI7 61 aa12.22□□□□□ -0.45
CBX6-202ENST00000407418 C1orf229Q6ZS94 237 aaPredicted RBP12.22□□□□□ -0.45
CBX6-202ENST00000407418 IGKV4-1P06312 121 aa12.21□□□□□ -0.45
CBX6-202ENST00000407418 MPLKIPQ8TAP9 179 aa12.2□□□□□ -0.46
CBX6-202ENST00000407418 SPTSSBQ8NFR3 76 aa12.2□□□□□ -0.46
CBX6-202ENST00000407418 TRAV23DV6A0A075B6W5 121 aa12.2□□□□□ -0.46
CBX6-202ENST00000407418 NHLRC4P0CG21 123 aaPredicted RBP12.2□□□□□ -0.46
CBX6-202ENST00000407418 NDUFV3P56181 108 aaKnown RBP12.2□□□□□ -0.46
CBX6-202ENST00000407418 FSHBP01225 129 aa12.2□□□□□ -0.46
CBX6-202ENST00000407418 CASC2Q6XLA1 102 aa12.19□□□□□ -0.46
CBX6-202ENST00000407418 LINC00643Q86TS7 51 aa12.19□□□□□ -0.46
CBX6-202ENST00000407418 IGKV2D-26A0A0A0MRZ7 120 aa12.19□□□□□ -0.46
CBX6-202ENST00000407418 FRMD6-AS1P0C7T7 363 aa12.19□□□□□ -0.46
CBX6-202ENST00000407418 PTPRQQ9UMZ3 2332 aa12.19□□□□□ -0.46
CBX6-202ENST00000407418 SPATA12Q7Z6I5 190 aa12.19□□□□□ -0.46
CBX6-202ENST00000407418 NBASA2RRP1 2371 aa12.18□□□□□ -0.46
CBX6-202ENST00000407418 DSCAMO60469 2012 aa12.18□□□□□ -0.46
CBX6-202ENST00000407418 MT-ATP8P03928 68 aa12.18□□□□□ -0.46
CBX6-202ENST00000407418 TNRC6BQ9UPQ9 1833 aaKnown RBP12.18□□□□□ -0.46
CBX6-202ENST00000407418 IGLC6P0CF74 106 aa12.18□□□□□ -0.46
CBX6-202ENST00000407418 EIF4EBP1Q13541 118 aaPredicted RBP12.18□□□□□ -0.46
CBX6-202ENST00000407418 MUC22E2RYF6 1773 aaPredicted RBP12.18□□□□□ -0.46
CBX6-202ENST00000407418 ALPK3Q96L96 1907 aa12.18□□□□□ -0.46
CBX6-202ENST00000407418 IBA57-AS1B1ANH7 110 aa12.18□□□□□ -0.46
CBX6-202ENST00000407418 SPANXB1Q9NS25 103 aaPredicted RBP12.18□□□□□ -0.46
CBX6-202ENST00000407418 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.17□□□□□ -0.462e-6■■■□□ 14.7
CBX6-202ENST00000407418 CD164L2Q6UWJ8 174 aa12.17□□□□□ -0.46
CBX6-202ENST00000407418 Q6ZS46 218 aa12.17□□□□□ -0.46
CBX6-202ENST00000407418 IGLV5-52A0A0A0MRZ9 124 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms