RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 TMEM141Q96I45 108 aa12.08□□□□□ -0.48
LSP1-204ENST00000406638 F6UB75 175 aa12.07□□□□□ -0.48
LSP1-204ENST00000406638 PRSS2P07478 247 aa12.07□□□□□ -0.48
LSP1-204ENST00000406638 POLR2KP53803 58 aaKnown RBP12.07□□□□□ -0.48
LSP1-204ENST00000406638 MDFICQ9P1T7 246 aa12.07□□□□□ -0.48
LSP1-204ENST00000406638 ZNF256Q9Y2P7 627 aaPredicted RBP12.07□□□□□ -0.48
LSP1-204ENST00000406638 H7C423 109 aa12.07□□□□□ -0.48
LSP1-204ENST00000406638 LINC00315P59091 139 aa12.07□□□□□ -0.48
LSP1-204ENST00000406638 AKAP9Q99996 3911 aa12.07□□□□□ -0.48
LSP1-204ENST00000406638 SDHAF1A6NFY7 115 aa12.07□□□□□ -0.48
LSP1-204ENST00000406638 Q6ZSV7 163 aa12.07□□□□□ -0.48
LSP1-204ENST00000406638 TIMM17AQ99595 171 aa12.07□□□□□ -0.48
LSP1-204ENST00000406638 PPDPFQ9H3Y8 114 aa12.07□□□□□ -0.48
LSP1-204ENST00000406638 MOB4Q9Y3A3 225 aa12.07□□□□□ -0.48
LSP1-204ENST00000406638 VCYO14598 125 aa12.06□□□□□ -0.48
LSP1-204ENST00000406638 LEPROTO15243 131 aa12.06□□□□□ -0.48
LSP1-204ENST00000406638 SUMO4Q6EEV6 95 aa12.06□□□□□ -0.48
LSP1-204ENST00000406638 DUX5Q96PT3 197 aa12.06□□□□□ -0.48
LSP1-204ENST00000406638 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.06□□□□□ -0.48
LSP1-204ENST00000406638 TMEM223A0PJW6 202 aa12.06□□□□□ -0.48
LSP1-204ENST00000406638 KIF25-AS1Q9Y6Z4 181 aa12.06□□□□□ -0.48
LSP1-204ENST00000406638 IGKV3-7A0A075B6H7 116 aa12.05□□□□□ -0.48
LSP1-204ENST00000406638 A6NDX4 124 aa12.05□□□□□ -0.48
LSP1-204ENST00000406638 CLEC2BQ92478 149 aa12.05□□□□□ -0.48
LSP1-204ENST00000406638 TRBV30A0A0K0K1B3 111 aa12.05□□□□□ -0.48
LSP1-204ENST00000406638 FAM110DQ8TAY7 271 aaPredicted RBP12.05□□□□□ -0.48
LSP1-204ENST00000406638 LINC00477Q96M19 166 aa12.05□□□□□ -0.48
LSP1-204ENST00000406638 VPREB3Q9UKI3 123 aa12.04□□□□□ -0.48
LSP1-204ENST00000406638 IGHV4OR15-8A0A075B7B6 117 aa12.04□□□□□ -0.48
LSP1-204ENST00000406638 A0A087WW49 117 aa12.04□□□□□ -0.48
LSP1-204ENST00000406638 NPC2P61916 151 aa12.04□□□□□ -0.48
LSP1-204ENST00000406638 FAM74A4Q5TZK3 123 aa12.04□□□□□ -0.48
LSP1-204ENST00000406638 LENEPQ9Y5L5 61 aa12.04□□□□□ -0.48
LSP1-204ENST00000406638 A0A0J9YXV3 536 aa12.03□□□□□ -0.48
LSP1-204ENST00000406638 M0R2P5 195 aa12.03□□□□□ -0.48
LSP1-204ENST00000406638 ZNF22P17026 224 aaPredicted RBP12.03□□□□□ -0.48
LSP1-204ENST00000406638 A0A0J9YXY3 114 aa12.03□□□□□ -0.48
LSP1-204ENST00000406638 C10orf99Q6UWK7 81 aa12.03□□□□□ -0.48
LSP1-204ENST00000406638 RPL11P62913 178 aaKnown RBP12.02□□□□□ -0.49
LSP1-204ENST00000406638 LINC01587Q99440 93 aa12.02□□□□□ -0.49
LSP1-204ENST00000406638 ICOSQ9Y6W8 199 aa12.02□□□□□ -0.49
LSP1-204ENST00000406638 C9orf139Q6ZV77 190 aa12.02□□□□□ -0.49
LSP1-204ENST00000406638 SPXQ9BT56 116 aa12.02□□□□□ -0.49
LSP1-204ENST00000406638 U3KQE9 123 aa12.02□□□□□ -0.49
LSP1-204ENST00000406638 TRAV41A0A0B4J266 112 aa12.01□□□□□ -0.49
LSP1-204ENST00000406638 EEF1AKMT3Q96AZ1 226 aa12.01□□□□□ -0.49
LSP1-204ENST00000406638 TRBV12-3P01733 135 aa12.01□□□□□ -0.49
LSP1-204ENST00000406638 ID1P41134 155 aa12.01□□□□□ -0.49
LSP1-204ENST00000406638 POM121L12Q8N7R1 296 aa12.01□□□□□ -0.49
LSP1-204ENST00000406638 LINC01600Q96MT4 127 aa12.01□□□□□ -0.49
LSP1-204ENST00000406638 MTORP42345 2549 aa12□□□□□ -0.49
LSP1-204ENST00000406638 ADAMTSL4-AS1Q5T5F5 129 aa12□□□□□ -0.49
LSP1-204ENST00000406638 LRRC75A-AS1Q8N1F1 130 aa12□□□□□ -0.49
LSP1-204ENST00000406638 TRGV11A0A075B6L2 103 aa12□□□□□ -0.49
LSP1-204ENST00000406638 IGHV3-11P01762 117 aa12□□□□□ -0.49
LSP1-204ENST00000406638 MYO9AB2RTY4 2548 aa11.99□□□□□ -0.49
LSP1-204ENST00000406638 FAM236AA0A1B0GUQ0 79 aa11.99□□□□□ -0.49
LSP1-204ENST00000406638 FAM236BA0A1B0GV22 79 aa11.99□□□□□ -0.49
LSP1-204ENST00000406638 C19orf54Q5BKX5 351 aa11.99□□□□□ -0.49
LSP1-204ENST00000406638 SPANXA1Q9NS26 97 aa11.99□□□□□ -0.49
LSP1-204ENST00000406638 TRBV27A0A0K0K1C4 114 aa11.99□□□□□ -0.49
LSP1-204ENST00000406638 HIST2H2BDQ6DRA6 164 aa11.99□□□□□ -0.49
LSP1-204ENST00000406638 CEMP1Q6PRD7 247 aaPredicted RBP11.99□□□□□ -0.49
LSP1-204ENST00000406638 MED14OSP0DP75 135 aa11.98□□□□□ -0.49
LSP1-204ENST00000406638 UNQ9165/PRO28630Q6UXU0 137 aa11.98□□□□□ -0.49
LSP1-204ENST00000406638 NF1P21359 2839 aa11.98□□□□□ -0.49
LSP1-204ENST00000406638 TRAV8-3A0A0A6YYJ7 113 aa11.98□□□□□ -0.49
LSP1-204ENST00000406638 OVOL1O14753 267 aa11.98□□□□□ -0.49
LSP1-204ENST00000406638 COX6CP09669 75 aa11.98□□□□□ -0.49
LSP1-204ENST00000406638 IGHV3-30-3P0DP02 117 aa11.98□□□□□ -0.49
LSP1-204ENST00000406638 MRPL23Q16540 153 aaKnown RBP11.98□□□□□ -0.49
LSP1-204ENST00000406638 TMEM126AQ9H061 195 aa11.98□□□□□ -0.49
LSP1-204ENST00000406638 YAE1D1Q9NRH1 226 aa11.98□□□□□ -0.49
LSP1-204ENST00000406638 H3BT86 120 aa11.97□□□□□ -0.49
LSP1-204ENST00000406638 LITAFQ99732 161 aa11.97□□□□□ -0.49
LSP1-204ENST00000406638 TRBV7-1A0A0A6YYK4 115 aa11.97□□□□□ -0.49
LSP1-204ENST00000406638 FSHBP01225 129 aa11.97□□□□□ -0.49
LSP1-204ENST00000406638 LINC00694P0DN24 101 aa11.97□□□□□ -0.49
LSP1-204ENST00000406638 IGHG2P01859 326 aa11.96□□□□□ -0.49
LSP1-204ENST00000406638 NXPH4O95158 308 aa11.96□□□□□ -0.5
LSP1-204ENST00000406638 TRBV7-7A0A0K0K1E9 115 aa11.95□□□□□ -0.5
LSP1-204ENST00000406638 A8MZ25 164 aa11.95□□□□□ -0.5
LSP1-204ENST00000406638 I3L3M4 83 aa11.95□□□□□ -0.5
LSP1-204ENST00000406638 J3QLI3 93 aa11.95□□□□□ -0.5
LSP1-204ENST00000406638 TMEM101Q96IK0 257 aa11.95□□□□□ -0.5
LSP1-204ENST00000406638 TIMM21Q9BVV7 248 aa11.95□□□□□ -0.5
LSP1-204ENST00000406638 FAM240AA0A1B0GVK7 77 aa11.94□□□□□ -0.5
LSP1-204ENST00000406638 PF4V1P10720 104 aa11.94□□□□□ -0.5
LSP1-204ENST00000406638 FAM19A4Q96LR4 140 aa11.94□□□□□ -0.5
LSP1-204ENST00000406638 A0A0J9YX75 114 aa11.94□□□□□ -0.5
LSP1-204ENST00000406638 LOC107984640A0A0U1RRK4 108 aa11.94□□□□□ -0.5
LSP1-204ENST00000406638 LST1O00453 97 aa11.94□□□□□ -0.5
LSP1-204ENST00000406638 SOCS3O14543 225 aa11.94□□□□□ -0.5
LSP1-204ENST00000406638 RNASE13Q5GAN3 156 aaKnown RBP11.93□□□□□ -0.5
LSP1-204ENST00000406638 SETD2Q9BYW2 2564 aaPredicted RBP11.93□□□□□ -0.5
LSP1-204ENST00000406638 IGLV4-3A0A075B6K6 122 aa11.93□□□□□ -0.5
LSP1-204ENST00000406638 TRAV12-3A0A0B4J271 114 aa11.93□□□□□ -0.5
LSP1-204ENST00000406638 C9orf153Q5TBE3 101 aa11.93□□□□□ -0.5
LSP1-204ENST00000406638 ANK3Q12955 4377 aaKnown RBP11.93□□□□□ -0.5
LSP1-204ENST00000406638 DAND5Q8N907 189 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms