RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 APOBP04114 4563 aaKnown RBP7.23□□□□□ -1.25
RPAIN-204ENST00000405578 TRBV25-1A0A075B6N4 114 aa7.23□□□□□ -1.25
RPAIN-204ENST00000405578 TRBV6-8A0A0A6YYG3 113 aa7.23□□□□□ -1.25
RPAIN-204ENST00000405578 IGHV3-38A0A0C4DH36 116 aa7.23□□□□□ -1.25
RPAIN-204ENST00000405578 SDHAF1A6NFY7 115 aa7.23□□□□□ -1.25
RPAIN-204ENST00000405578 C16orf90A8MZG2 172 aa7.23□□□□□ -1.25
RPAIN-204ENST00000405578 PHOX2AO14813 284 aa7.23□□□□□ -1.25
RPAIN-204ENST00000405578 NCR2O95944 276 aa7.23□□□□□ -1.25
RPAIN-204ENST00000405578 APCSP02743 223 aa7.23□□□□□ -1.25
RPAIN-204ENST00000405578 PMCHP20382 165 aa7.23□□□□□ -1.25
RPAIN-204ENST00000405578 TTC32Q5I0X7 151 aa7.23□□□□□ -1.25
RPAIN-204ENST00000405578 TMEM136Q6ZRR5 245 aa7.23□□□□□ -1.25
RPAIN-204ENST00000405578 Q8N1X5 172 aa7.23□□□□□ -1.25
RPAIN-204ENST00000405578 LAMTOR2Q9Y2Q5 125 aa7.23□□□□□ -1.25
RPAIN-204ENST00000405578 TRBV24-1A0A075B6N3 115 aa7.22□□□□□ -1.25
RPAIN-204ENST00000405578 D6R8Y8 96 aa7.22□□□□□ -1.25
RPAIN-204ENST00000405578 SMKR1H3BMG3 65 aa7.22□□□□□ -1.25
RPAIN-204ENST00000405578 I3L3M4 83 aa7.22□□□□□ -1.25
RPAIN-204ENST00000405578 K7EP13 123 aa7.22□□□□□ -1.25
RPAIN-204ENST00000405578 VCYO14598 125 aa7.22□□□□□ -1.25
RPAIN-204ENST00000405578 SUMO2P61956 95 aaKnown RBP7.22□□□□□ -1.25
RPAIN-204ENST00000405578 ELOBQ15370 118 aa7.22□□□□□ -1.25
RPAIN-204ENST00000405578 ATRAIDQ6UW56 229 aa7.22□□□□□ -1.25
RPAIN-204ENST00000405578 PRELID3AQ96N28 172 aa7.22□□□□□ -1.25
RPAIN-204ENST00000405578 KIR2DL4Q99706 377 aa7.22□□□□□ -1.25
RPAIN-204ENST00000405578 C20orf78Q9BR46 151 aa7.22□□□□□ -1.25
RPAIN-204ENST00000405578 IGLV2-18A0A075B6J9 118 aa7.21□□□□□ -1.26
RPAIN-204ENST00000405578 A0A087WX48 190 aa7.21□□□□□ -1.26
RPAIN-204ENST00000405578 IGHV1-24A0A0C4DH33 117 aa7.21□□□□□ -1.26
RPAIN-204ENST00000405578 TMEM262E9PQX1 116 aa7.21□□□□□ -1.26
RPAIN-204ENST00000405578 TCAPO15273 167 aa7.21□□□□□ -1.26
RPAIN-204ENST00000405578 TNFRSF6BO95407 300 aa7.21□□□□□ -1.26
RPAIN-204ENST00000405578 FCER1GP30273 86 aa7.21□□□□□ -1.26
RPAIN-204ENST00000405578 AMTP48728 403 aa7.21□□□□□ -1.26
RPAIN-204ENST00000405578 C10orf126Q8N4M7 172 aa7.21□□□□□ -1.26
RPAIN-204ENST00000405578 CHCHD5Q9BSY4 110 aa7.21□□□□□ -1.26
RPAIN-204ENST00000405578 TMEM70Q9BUB7 260 aa7.21□□□□□ -1.26
RPAIN-204ENST00000405578 NACAE9PAV3 2078 aa7.21□□□□□ -1.26
RPAIN-204ENST00000405578 TGIF2-C20orf24A0A0A6YYL0 155 aa7.2□□□□□ -1.26
RPAIN-204ENST00000405578 UBE2L6O14933 153 aa7.2□□□□□ -1.26
RPAIN-204ENST00000405578 DNAH10OSP0CZ25 163 aa7.2□□□□□ -1.26
RPAIN-204ENST00000405578 RPS10P46783 165 aaKnown RBP7.2□□□□□ -1.26
RPAIN-204ENST00000405578 IQCJQ1A5X6 159 aa7.2□□□□□ -1.26
RPAIN-204ENST00000405578 WFDC10BQ8IUB3 73 aa7.2□□□□□ -1.26
RPAIN-204ENST00000405578 LINC00469Q8N7U9 141 aa7.2□□□□□ -1.26
RPAIN-204ENST00000405578 NRACQ8N912 160 aa7.2□□□□□ -1.26
RPAIN-204ENST00000405578 TMEM243Q9BU79 118 aa7.2□□□□□ -1.26
RPAIN-204ENST00000405578 TRBV27A0A0K0K1C4 114 aa7.19□□□□□ -1.26
RPAIN-204ENST00000405578 NBDYA0A0U1RRE5 68 aa7.19□□□□□ -1.26
RPAIN-204ENST00000405578 PCP4L1A6NKN8 68 aa7.19□□□□□ -1.26
RPAIN-204ENST00000405578 GAS8-AS1O95177 125 aa7.19□□□□□ -1.26
RPAIN-204ENST00000405578 POLR2KP53803 58 aaKnown RBP7.19□□□□□ -1.26
RPAIN-204ENST00000405578 RPL32P62910 135 aaKnown RBP7.19□□□□□ -1.26
RPAIN-204ENST00000405578 FABP9Q0Z7S8 132 aa7.19□□□□□ -1.26
RPAIN-204ENST00000405578 LINC01556Q5JQF7 62 aa7.19□□□□□ -1.26
RPAIN-204ENST00000405578 CBLN2Q8IUK8 224 aa7.19□□□□□ -1.26
RPAIN-204ENST00000405578 C12orf57Q99622 126 aa7.19□□□□□ -1.26
RPAIN-204ENST00000405578 CHCHD7Q9BUK0 85 aa7.19□□□□□ -1.26
RPAIN-204ENST00000405578 MRPL18Q9H0U6 180 aaKnown RBP7.19□□□□□ -1.26
RPAIN-204ENST00000405578 MAP1LC3AQ9H492 121 aa7.19□□□□□ -1.26
RPAIN-204ENST00000405578 TRAPPC1Q9Y5R8 145 aa7.19□□□□□ -1.26
RPAIN-204ENST00000405578 SMIM6P0DI80 62 aa7.18□□□□□ -1.26
RPAIN-204ENST00000405578 RAB5AP20339 215 aa7.18□□□□□ -1.26
RPAIN-204ENST00000405578 SMAGPQ0VAQ4 97 aa7.18□□□□□ -1.26
RPAIN-204ENST00000405578 Q6ZR54 194 aa7.18□□□□□ -1.26
RPAIN-204ENST00000405578 NIT1Q86X76 327 aa7.18□□□□□ -1.26
RPAIN-204ENST00000405578 SMIM2Q9BVW6 85 aa7.18□□□□□ -1.26
RPAIN-204ENST00000405578 H7C423 109 aa7.17□□□□□ -1.26
RPAIN-204ENST00000405578 NPYP01303 97 aa7.17□□□□□ -1.26
RPAIN-204ENST00000405578 BTF3P20290 206 aaKnown RBP7.17□□□□□ -1.26
RPAIN-204ENST00000405578 SMCPP49901 116 aaPredicted RBP7.17□□□□□ -1.26
RPAIN-204ENST00000405578 NTM-AS1Q6ZSK4 140 aa7.17□□□□□ -1.26
RPAIN-204ENST00000405578 TMEM18Q96B42 140 aa7.17□□□□□ -1.26
RPAIN-204ENST00000405578 LOC389332A0A1B0GUA5 103 aa7.16□□□□□ -1.26
RPAIN-204ENST00000405578 TSHBP01222 138 aa7.16□□□□□ -1.26
RPAIN-204ENST00000405578 IGHV3-30P01768 117 aa7.16□□□□□ -1.26
RPAIN-204ENST00000405578 IGHV3-33P01772 117 aa7.16□□□□□ -1.26
RPAIN-204ENST00000405578 S100A6P06703 90 aa7.16□□□□□ -1.26
RPAIN-204ENST00000405578 IGHV3-30-3P0DP02 117 aa7.16□□□□□ -1.26
RPAIN-204ENST00000405578 IGHV3-30-5P0DP03 117 aa7.16□□□□□ -1.26
RPAIN-204ENST00000405578 AKR1D1P51857 326 aa7.16□□□□□ -1.26
RPAIN-204ENST00000405578 GAGE6Q13070 117 aa7.16□□□□□ -1.26
RPAIN-204ENST00000405578 KIAA1644Q3SXP7 199 aa7.16□□□□□ -1.26
RPAIN-204ENST00000405578 AMMECR1LQ6DCA0 310 aa7.16□□□□□ -1.26
RPAIN-204ENST00000405578 PRSS47A8MTI9 375 aa7.15□□□□□ -1.26
RPAIN-204ENST00000405578 J3QL48 77 aa7.15□□□□□ -1.26
RPAIN-204ENST00000405578 K7EMI3 77 aa7.15□□□□□ -1.26
RPAIN-204ENST00000405578 TNP2Q05952 138 aa7.15□□□□□ -1.26
RPAIN-204ENST00000405578 C1orf134Q5TEV5 83 aa7.15□□□□□ -1.26
RPAIN-204ENST00000405578 NFE4Q86UQ8 179 aa7.15□□□□□ -1.26
RPAIN-204ENST00000405578 DEFB104AQ8WTQ1 72 aa7.15□□□□□ -1.26
RPAIN-204ENST00000405578 TMEM101Q96IK0 257 aa7.15□□□□□ -1.26
RPAIN-204ENST00000405578 YPEL4Q96NS1 127 aa7.15□□□□□ -1.26
RPAIN-204ENST00000405578 NXT2Q9NPJ8 142 aaKnown RBP7.15□□□□□ -1.26
RPAIN-204ENST00000405578 DNAH5Q8TE73 4624 aa7.14□□□□□ -1.27
RPAIN-204ENST00000405578 TRAV8-3A0A0A6YYJ7 113 aa7.14□□□□□ -1.27
RPAIN-204ENST00000405578 CRPP02741 224 aa7.14□□□□□ -1.27
RPAIN-204ENST00000405578 G0S2P27469 103 aa7.14□□□□□ -1.27
RPAIN-204ENST00000405578 LAGE3Q14657 143 aa7.14□□□□□ -1.27
RPAIN-204ENST00000405578 DGAT2L7PQ6IED9 249 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms