RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 TRAV26-2A0A0B4J265 109 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 F2Z2F3 143 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 GATCO43716 136 aaKnown RBP3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 SMR3BP02814 79 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 ANGP03950 147 aaKnown RBP3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 SLPIP03973 132 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 TRGC1P0CF51 173 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 FOXA3P55318 350 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 TWIST1Q15672 202 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 KCNIP4Q6PIL6 250 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 RASL11AQ6T310 242 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 ATRAIDQ6UW56 229 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 CLPSL2Q6UWE3 100 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 ENHOQ6UWT2 76 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 PGLYRP4Q96LB8 373 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 FAM210AQ96ND0 272 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 SMIM7Q9BQ49 75 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 DPH3P1Q9H4G8 78 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 FAM30AQ9NZY2 134 aa3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 DMBT1Q9UGM3 2413 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P20-201ENST00000402555 VPS13BQ7Z7G8 4022 aa3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 IGHV1-24A0A0C4DH33 117 aa3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 H7C1H1 209 aa3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 ZNF561-AS1K7EIQ3 104 aa3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 CRPP02741 224 aa3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 SRP19P09132 144 aaKnown RBP3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 RBX1P62877 108 aa3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 ELOBQ15370 118 aa3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 WDR73Q6P4I2 378 aa3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 GATD1Q8NB37 220 aa3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 NTN5Q8WTR8 489 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 RMI2Q96E14 147 aa3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 CHCHD7Q9BUK0 85 aa3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 CNFNQ9BYD5 112 aa3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 NIT2Q9NQR4 276 aa3.79□□□□□ -1.8
HMGB1P20-201ENST00000402555 TRBV25-1A0A075B6N4 114 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 ZNF727A8MUV8 499 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 A8MWL6 223 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 EPM2AB3EWF7 344 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 C9JQL5 133 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 HLA-DQA1P01909 254 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 Q0VG73 95 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 IQCJQ1A5X6 159 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 TMEM97Q5BJF2 176 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 FAM231DQ6ZW35 169 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 LINC01551Q86U37 167 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 LINC00269Q8N2A0 174 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 RPL39LQ96EH5 51 aaKnown RBP3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 TMEM243Q9BU79 118 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 C1orf43Q9BWL3 253 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 GFRA4Q9GZZ7 299 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 COX11Q9Y6N1 276 aa3.78□□□□□ -1.8
HMGB1P20-201ENST00000402555 IGLV4-60A0A075B6I1 120 aa3.77□□□□□ -1.81
HMGB1P20-201ENST00000402555 IGLV10-54A0A075B6I4 117 aa3.77□□□□□ -1.81
HMGB1P20-201ENST00000402555 HIGD1CA8MV81 97 aa3.77□□□□□ -1.81
HMGB1P20-201ENST00000402555 GAS8-AS1O95177 125 aa3.77□□□□□ -1.81
HMGB1P20-201ENST00000402555 AMTP48728 403 aa3.77□□□□□ -1.81
HMGB1P20-201ENST00000402555 PKIAP61925 76 aa3.77□□□□□ -1.81
HMGB1P20-201ENST00000402555 Q5VSD8 79 aa3.77□□□□□ -1.81
HMGB1P20-201ENST00000402555 C20orf203Q8NBC4 194 aa3.77□□□□□ -1.81
HMGB1P20-201ENST00000402555 TMEM70Q9BUB7 260 aa3.77□□□□□ -1.81
HMGB1P20-201ENST00000402555 MYCBP2O75592 4640 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 A0A1B0GUT8 65 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 USP17L23D6RBM5 183 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 UBE2L6O14933 153 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 RPL23P62829 140 aaKnown RBP3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 COTL1Q14019 142 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 ADIRFQ15847 76 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 MIAQ16674 131 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 CT83Q5H943 113 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 KRTAP26-1Q6PEX3 210 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 TEX261Q6UWH6 196 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 SMIM15Q7Z3B0 74 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 TSKUQ8WUA8 353 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 FRZBQ92765 325 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 ISOC2Q96AB3 205 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 OSTCQ9NRP0 149 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 PRR34Q9NV39 138 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 V9GYV3 84 aa3.76□□□□□ -1.81
HMGB1P20-201ENST00000402555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 IGKV3OR2-268A0A0C4DH90 116 aa3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 IGKV2-29A2NJV5 120 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 SDHAF1A6NFY7 115 aa3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 SMKR1H3BMG3 65 aa3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 NDUFS6O75380 124 aaKnown RBP3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 NCR2O95944 276 aa3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 PRSS1P07477 247 aa3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 INAFM2P0DMQ5 153 aa3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 RPS10P46783 165 aaKnown RBP3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 REG3AQ06141 175 aa3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 TMEM241Q24JQ0 296 aa3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 Q6ZSA8 131 aa3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 AMN1Q8IY45 258 aa3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 NUP35Q8NFH5 326 aa3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 BORCS7Q96B45 105 aa3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 RNF185Q96GF1 192 aa3.75□□□□□ -1.81
HMGB1P20-201ENST00000402555 HERC1Q15751 4861 aa3.74□□□□□ -1.81
HMGB1P20-201ENST00000402555 A0A1B0GUV1 79 aa3.74□□□□□ -1.81
HMGB1P20-201ENST00000402555 FAM231BA6NCW3 169 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms