RNA–Protein interactions for RNA: ENST00000400761.7

PDGFA-202, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-202ENST00000400761 D6R8Y8 96 aa11.92□□□□□ -0.5
PDGFA-202ENST00000400761 Q5VSD8 79 aa11.92□□□□□ -0.5
PDGFA-202ENST00000400761 MRPS16Q9Y3D3 137 aaKnown RBP11.92□□□□□ -0.5
PDGFA-202ENST00000400761 SCO1O75880 301 aa11.91□□□□□ -0.5
PDGFA-202ENST00000400761 NRACQ8N912 160 aa11.91□□□□□ -0.5
PDGFA-202ENST00000400761 GNB1LQ9BYB4 327 aa11.91□□□□□ -0.5
PDGFA-202ENST00000400761 TRBV6-5A0A0K0K1A5 114 aa11.9□□□□□ -0.5
PDGFA-202ENST00000400761 HLA-DQA1P01909 254 aa11.9□□□□□ -0.5
PDGFA-202ENST00000400761 TIRAPP58753 221 aa11.9□□□□□ -0.5
PDGFA-202ENST00000400761 COX19Q49B96 90 aa11.9□□□□□ -0.5
PDGFA-202ENST00000400761 DAZ4Q86SG3 579 aaKnown RBP11.9□□□□□ -0.5
PDGFA-202ENST00000400761 DEFB104AQ8WTQ1 72 aa11.9□□□□□ -0.5
PDGFA-202ENST00000400761 ST20Q9HBF5 79 aa11.9□□□□□ -0.5
PDGFA-202ENST00000400761 DAZ3Q9NR90 486 aaKnown RBP11.9□□□□□ -0.5
PDGFA-202ENST00000400761 NPYP01303 97 aa11.89□□□□□ -0.51
PDGFA-202ENST00000400761 APCSP02743 223 aa11.89□□□□□ -0.51
PDGFA-202ENST00000400761 S100A1P23297 94 aa11.89□□□□□ -0.51
PDGFA-202ENST00000400761 KIAA1644Q3SXP7 199 aa11.89□□□□□ -0.51
PDGFA-202ENST00000400761 ORMDL3Q8N138 153 aa11.89□□□□□ -0.51
PDGFA-202ENST00000400761 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.89□□□□□ -0.51
PDGFA-202ENST00000400761 SDHAF1A6NFY7 115 aa11.88□□□□□ -0.51
PDGFA-202ENST00000400761 TNFRSF6BO95407 300 aa11.88□□□□□ -0.51
PDGFA-202ENST00000400761 PPBPP02775 128 aa11.88□□□□□ -0.51
PDGFA-202ENST00000400761 LELP1Q5T871 98 aa11.88□□□□□ -0.51
PDGFA-202ENST00000400761 PRELID3AQ96N28 172 aa11.88□□□□□ -0.51
PDGFA-202ENST00000400761 MRPL18Q9H0U6 180 aaKnown RBP11.88□□□□□ -0.51
PDGFA-202ENST00000400761 PPP1R17O96001 155 aa11.87□□□□□ -0.51
PDGFA-202ENST00000400761 MT-ND6P03923 174 aa11.87□□□□□ -0.51
PDGFA-202ENST00000400761 BTF3P20290 206 aaKnown RBP11.87□□□□□ -0.51
PDGFA-202ENST00000400761 XGP55808 180 aa11.87□□□□□ -0.51
PDGFA-202ENST00000400761 WFDC10BQ8IUB3 73 aa11.87□□□□□ -0.51
PDGFA-202ENST00000400761 UPK3BQ9BT76 320 aa11.87□□□□□ -0.51
PDGFA-202ENST00000400761 TMEM70Q9BUB7 260 aa11.87□□□□□ -0.51
PDGFA-202ENST00000400761 SUMO2P61956 95 aaKnown RBP11.86□□□□□ -0.51
PDGFA-202ENST00000400761 NTM-AS1Q6ZSK4 140 aa11.86□□□□□ -0.51
PDGFA-202ENST00000400761 TRAPPC1Q9Y5R8 145 aa11.86□□□□□ -0.51
PDGFA-202ENST00000400761 TRBV6-8A0A0A6YYG3 113 aa11.85□□□□□ -0.51
PDGFA-202ENST00000400761 TRAV8-6A0A0B4J262 113 aa11.85□□□□□ -0.51
PDGFA-202ENST00000400761 PMCHP20382 165 aa11.85□□□□□ -0.51
PDGFA-202ENST00000400761 POLR2KP53803 58 aaKnown RBP11.85□□□□□ -0.51
PDGFA-202ENST00000400761 FABP9Q0Z7S8 132 aa11.85□□□□□ -0.51
PDGFA-202ENST00000400761 COTL1Q14019 142 aa11.85□□□□□ -0.51
PDGFA-202ENST00000400761 HMCN2Q8NDA2 5059 aa11.85□□□□□ -0.51
PDGFA-202ENST00000400761 PHOX2AO14813 284 aa11.84□□□□□ -0.51
PDGFA-202ENST00000400761 TMEM97Q5BJF2 176 aa11.84□□□□□ -0.51
PDGFA-202ENST00000400761 C20orf78Q9BR46 151 aa11.84□□□□□ -0.51
PDGFA-202ENST00000400761 Q9H8V8 135 aa11.84□□□□□ -0.51
PDGFA-202ENST00000400761 I3L3M4 83 aa11.83□□□□□ -0.52
PDGFA-202ENST00000400761 J3QL48 77 aa11.83□□□□□ -0.52
PDGFA-202ENST00000400761 SIVA1O15304 175 aa11.83□□□□□ -0.52
PDGFA-202ENST00000400761 LAMTOR2Q9Y2Q5 125 aa11.83□□□□□ -0.52
PDGFA-202ENST00000400761 TRBV25-1A0A075B6N4 114 aa11.82□□□□□ -0.52
PDGFA-202ENST00000400761 IGHV1-24A0A0C4DH33 117 aa11.82□□□□□ -0.52
PDGFA-202ENST00000400761 TRBV27A0A0K0K1C4 114 aa11.82□□□□□ -0.52
PDGFA-202ENST00000400761 VCYO14598 125 aa11.82□□□□□ -0.52
PDGFA-202ENST00000400761 TSHBP01222 138 aa11.82□□□□□ -0.52
PDGFA-202ENST00000400761 SMIM2Q9BVW6 85 aa11.82□□□□□ -0.52
PDGFA-202ENST00000400761 KRTAP1-5Q9BYS1 174 aa11.82□□□□□ -0.52
PDGFA-202ENST00000400761 LOC389332A0A1B0GUA5 103 aa11.81□□□□□ -0.52
PDGFA-202ENST00000400761 COLCA2A8K830 154 aa11.81□□□□□ -0.52
PDGFA-202ENST00000400761 AMTP48728 403 aa11.81□□□□□ -0.52
PDGFA-202ENST00000400761 IQCJQ1A5X6 159 aa11.81□□□□□ -0.52
PDGFA-202ENST00000400761 MAP1LC3AQ9H492 121 aa11.81□□□□□ -0.52
PDGFA-202ENST00000400761 RPL32P62910 135 aaKnown RBP11.8□□□□□ -0.52
PDGFA-202ENST00000400761 Q8N3U1 123 aa11.8□□□□□ -0.52
PDGFA-202ENST00000400761 CHCHD5Q9BSY4 110 aa11.8□□□□□ -0.52
PDGFA-202ENST00000400761 ALKBH7Q9BT30 221 aaPredicted RBP11.8□□□□□ -0.52
PDGFA-202ENST00000400761 TMEM243Q9BU79 118 aa11.8□□□□□ -0.52
PDGFA-202ENST00000400761 IGHV3-30P01768 117 aa11.79□□□□□ -0.52
PDGFA-202ENST00000400761 IGHV3-33P01772 117 aa11.79□□□□□ -0.52
PDGFA-202ENST00000400761 IGHV3-30-3P0DP02 117 aa11.79□□□□□ -0.52
PDGFA-202ENST00000400761 IGHV3-30-5P0DP03 117 aa11.79□□□□□ -0.52
PDGFA-202ENST00000400761 TTC32Q5I0X7 151 aa11.79□□□□□ -0.52
PDGFA-202ENST00000400761 KIR2DL4Q99706 377 aa11.79□□□□□ -0.52
PDGFA-202ENST00000400761 DNAH10OSP0CZ25 163 aa11.78□□□□□ -0.52
PDGFA-202ENST00000400761 RAB5AP20339 215 aa11.78□□□□□ -0.52
PDGFA-202ENST00000400761 FCER1GP30273 86 aa11.78□□□□□ -0.52
PDGFA-202ENST00000400761 GAGE6Q13070 117 aa11.78□□□□□ -0.52
PDGFA-202ENST00000400761 NIT1Q86X76 327 aa11.78□□□□□ -0.52
PDGFA-202ENST00000400761 CHCHD7Q9BUK0 85 aa11.78□□□□□ -0.52
PDGFA-202ENST00000400761 PGPEP1Q9NXJ5 209 aa11.78□□□□□ -0.52
PDGFA-202ENST00000400761 PRSS47A8MTI9 375 aa11.77□□□□□ -0.53
PDGFA-202ENST00000400761 TMEM262E9PQX1 116 aa11.77□□□□□ -0.53
PDGFA-202ENST00000400761 TCAPO15273 167 aa11.77□□□□□ -0.53
PDGFA-202ENST00000400761 LINC01556Q5JQF7 62 aa11.77□□□□□ -0.53
PDGFA-202ENST00000400761 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.76□□□□□ -0.53
PDGFA-202ENST00000400761 IGKV2-29A2NJV5 120 aaPredicted RBP11.76□□□□□ -0.53
PDGFA-202ENST00000400761 SMR3BP02814 79 aaPredicted RBP11.76□□□□□ -0.53
PDGFA-202ENST00000400761 Q8N8P6 123 aa11.76□□□□□ -0.53
PDGFA-202ENST00000400761 UBE2L6O14933 153 aa11.75□□□□□ -0.53
PDGFA-202ENST00000400761 TRGC2P03986 189 aa11.75□□□□□ -0.53
PDGFA-202ENST00000400761 ESDP10768 282 aa11.75□□□□□ -0.53
PDGFA-202ENST00000400761 FUSP35637 526 aaKnown RBP eCLIP11.75□□□□□ -0.53
PDGFA-202ENST00000400761 IFI27P40305 119 aaPredicted RBP11.75□□□□□ -0.53
PDGFA-202ENST00000400761 MPV17L2Q567V2 206 aa11.75□□□□□ -0.53
PDGFA-202ENST00000400761 A0A087WX48 190 aa11.74□□□□□ -0.53
PDGFA-202ENST00000400761 CDPF1Q6NVV7 123 aa11.73□□□□□ -0.53
PDGFA-202ENST00000400761 NXT2Q9NPJ8 142 aaKnown RBP11.73□□□□□ -0.53
PDGFA-202ENST00000400761 FAM229AH3BQW9 127 aa11.72□□□□□ -0.53
PDGFA-202ENST00000400761 PKIAP61925 76 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms