RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 MED14OSP0DP75 135 aa9.34□□□□□ -0.91
PPP4R1-202ENST00000400555 RBMY1A1P0DJD3 496 aaKnown RBP9.33□□□□□ -0.92
PPP4R1-202ENST00000400555 RBMY1CP0DJD4 496 aa9.33□□□□□ -0.92
PPP4R1-202ENST00000400555 RBMY1FQ15415 496 aaKnown RBP9.33□□□□□ -0.92
PPP4R1-202ENST00000400555 Q96MF0 132 aa9.33□□□□□ -0.92
PPP4R1-202ENST00000400555 TRBV27A0A0K0K1C4 114 aa9.33□□□□□ -0.92
PPP4R1-202ENST00000400555 CRIP2P52943 208 aaPredicted RBP9.33□□□□□ -0.92
PPP4R1-202ENST00000400555 Q6ZSV7 163 aa9.33□□□□□ -0.92
PPP4R1-202ENST00000400555 FAM19A4Q96LR4 140 aa9.33□□□□□ -0.92
PPP4R1-202ENST00000400555 TIMM17AQ99595 171 aa9.33□□□□□ -0.92
PPP4R1-202ENST00000400555 FASNP49327 2511 aaKnown RBP9.33□□□□□ -0.92
PPP4R1-202ENST00000400555 IGLV4-3A0A075B6K6 122 aa9.32□□□□□ -0.92
PPP4R1-202ENST00000400555 LGALS9O00182 355 aa9.32□□□□□ -0.92
PPP4R1-202ENST00000400555 RHODO00212 210 aa9.32□□□□□ -0.92
PPP4R1-202ENST00000400555 ZNF22P17026 224 aaPredicted RBP9.32□□□□□ -0.92
PPP4R1-202ENST00000400555 Q6ZSN1 163 aa9.32□□□□□ -0.92
PPP4R1-202ENST00000400555 NDUFA12Q9UI09 145 aa9.32□□□□□ -0.92
PPP4R1-202ENST00000400555 HECTD1Q9ULT8 2610 aa9.32□□□□□ -0.92
PPP4R1-202ENST00000400555 RPL35AP18077 110 aaKnown RBP9.31□□□□□ -0.92
PPP4R1-202ENST00000400555 C10orf126Q8N4M7 172 aa9.31□□□□□ -0.92
PPP4R1-202ENST00000400555 C9orf85Q96MD7 179 aa9.31□□□□□ -0.92
PPP4R1-202ENST00000400555 STHQ8IWL8 128 aa9.31□□□□□ -0.92
PPP4R1-202ENST00000400555 IGHV3-30-3P0DP02 117 aa9.31□□□□□ -0.92
PPP4R1-202ENST00000400555 SLC25A29Q8N8R3 303 aa9.31□□□□□ -0.92
PPP4R1-202ENST00000400555 GCN1Q92616 2671 aaKnown RBP9.3□□□□□ -0.92
PPP4R1-202ENST00000400555 IGHV3-30P01768 117 aa9.3□□□□□ -0.92
PPP4R1-202ENST00000400555 IGHV3-30-5P0DP03 117 aa9.3□□□□□ -0.92
PPP4R1-202ENST00000400555 FOXI1Q12951 378 aa9.3□□□□□ -0.92
PPP4R1-202ENST00000400555 TOMM7Q9P0U1 55 aa9.3□□□□□ -0.92
PPP4R1-202ENST00000400555 LINC01619G3V211 115 aa9.3□□□□□ -0.92
PPP4R1-202ENST00000400555 ELANEP08246 267 aa9.3□□□□□ -0.92
PPP4R1-202ENST00000400555 ZNF415Q09FC8 603 aa9.3□□□□□ -0.92
PPP4R1-202ENST00000400555 Q6ZUT4 128 aa9.3□□□□□ -0.92
PPP4R1-202ENST00000400555 GAGE12JA6NER3 117 aa9.29□□□□□ -0.92
PPP4R1-202ENST00000400555 GATA3P23771 443 aa9.29□□□□□ -0.92
PPP4R1-202ENST00000400555 GAGE4Q13068 117 aa9.29□□□□□ -0.92
PPP4R1-202ENST00000400555 GAGE5Q13069 117 aa9.29□□□□□ -0.92
PPP4R1-202ENST00000400555 KLK9Q2XQG4 91 aa9.29□□□□□ -0.92
PPP4R1-202ENST00000400555 MEIG1Q5JSS6 88 aa9.29□□□□□ -0.92
PPP4R1-202ENST00000400555 H3BMM0 161 aa9.29□□□□□ -0.92
PPP4R1-202ENST00000400555 NDUFA7O95182 113 aa9.29□□□□□ -0.92
PPP4R1-202ENST00000400555 NFE4Q86UQ8 179 aa9.29□□□□□ -0.92
PPP4R1-202ENST00000400555 ZNF702PQ9H963 129 aa9.29□□□□□ -0.92
PPP4R1-202ENST00000400555 PEMTQ9UBM1 199 aa9.29□□□□□ -0.92
PPP4R1-202ENST00000400555 LEPROTO15243 131 aa9.29□□□□□ -0.92
PPP4R1-202ENST00000400555 TRBV7-9A0A0J9YWB2 115 aa9.28□□□□□ -0.92
PPP4R1-202ENST00000400555 M0R2P5 195 aa9.28□□□□□ -0.92
PPP4R1-202ENST00000400555 SLC25A20O43772 301 aa9.28□□□□□ -0.92
PPP4R1-202ENST00000400555 DSCR9P59020 149 aa9.28□□□□□ -0.92
PPP4R1-202ENST00000400555 RHOHQ15669 191 aa9.28□□□□□ -0.92
PPP4R1-202ENST00000400555 ANKRD29Q8N6D5 301 aa9.28□□□□□ -0.92
PPP4R1-202ENST00000400555 LINC00467Q9BRT7 94 aa9.28□□□□□ -0.92
PPP4R1-202ENST00000400555 TMEM223A0PJW6 202 aa9.28□□□□□ -0.92
PPP4R1-202ENST00000400555 SMCPP49901 116 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-202ENST00000400555 NTN5Q8WTR8 489 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-202ENST00000400555 C1QTNF4Q9BXJ3 329 aa9.28□□□□□ -0.92
PPP4R1-202ENST00000400555 UBE2D1P51668 147 aa9.28□□□□□ -0.92
PPP4R1-202ENST00000400555 TRGV2A0A075B6R0 118 aa9.27□□□□□ -0.93
PPP4R1-202ENST00000400555 A0A0J9YXY3 114 aa9.27□□□□□ -0.93
PPP4R1-202ENST00000400555 RBMY1BA6NDE4 496 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-202ENST00000400555 RBMY1EA6NEQ0 496 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-202ENST00000400555 MT-ATP8P03928 68 aa9.27□□□□□ -0.93
PPP4R1-202ENST00000400555 RBMY1DP0C7P1 496 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-202ENST00000400555 NXPH4O95158 308 aa9.27□□□□□ -0.93
PPP4R1-202ENST00000400555 CFAP126Q5VTH2 177 aa9.27□□□□□ -0.93
PPP4R1-202ENST00000400555 CKS1BP61024 79 aa9.26□□□□□ -0.93
PPP4R1-202ENST00000400555 WFDC10AQ9H1F0 79 aa9.26□□□□□ -0.93
PPP4R1-202ENST00000400555 MAP6D1Q9H9H5 199 aa9.26□□□□□ -0.93
PPP4R1-202ENST00000400555 CDKN2A-AS1Q9UH64 79 aa9.26□□□□□ -0.93
PPP4R1-202ENST00000400555 INSP01308 110 aa9.26□□□□□ -0.93
PPP4R1-202ENST00000400555 IGHV4-31P0DP07 118 aa9.26□□□□□ -0.93
PPP4R1-202ENST00000400555 CLEC2BQ92478 149 aa9.26□□□□□ -0.93
PPP4R1-202ENST00000400555 TRBV6-5A0A0K0K1A5 114 aa9.25□□□□□ -0.93
PPP4R1-202ENST00000400555 C11orf68Q9H3H3 251 aaKnown RBP9.25□□□□□ -0.93
PPP4R1-202ENST00000400555 NSUN5P1Q3KNT7 163 aa9.25□□□□□ -0.93
PPP4R1-202ENST00000400555 PPDPFLQ8WWR9 84 aa9.25□□□□□ -0.93
PPP4R1-202ENST00000400555 PRO0461Q9UI25 63 aa9.25□□□□□ -0.93
PPP4R1-202ENST00000400555 GAGE7O76087 117 aa9.25□□□□□ -0.93
PPP4R1-202ENST00000400555 GAGE12FP0CL80 117 aa9.25□□□□□ -0.93
PPP4R1-202ENST00000400555 GAGE12GP0CL81 117 aa9.25□□□□□ -0.93
PPP4R1-202ENST00000400555 GAGE12IP0CL82 117 aa9.25□□□□□ -0.93
PPP4R1-202ENST00000400555 Q6YL49 198 aa9.25□□□□□ -0.93
PPP4R1-202ENST00000400555 NOP10Q9NPE3 64 aaKnown RBP9.25□□□□□ -0.93
PPP4R1-202ENST00000400555 ADAMTSL4-AS1Q5T5F5 129 aa9.24□□□□□ -0.93
PPP4R1-202ENST00000400555 COX6CP09669 75 aa9.24□□□□□ -0.93
PPP4R1-202ENST00000400555 BBC3Q96PG8 261 aaPredicted RBP9.24□□□□□ -0.93
PPP4R1-202ENST00000400555 ITPR2Q14571 2701 aa9.24□□□□□ -0.93
PPP4R1-202ENST00000400555 A0A1B0GV72 72 aa9.24□□□□□ -0.93
PPP4R1-202ENST00000400555 IGHV3-33P01772 117 aa9.24□□□□□ -0.93
PPP4R1-202ENST00000400555 PLA2G2AP14555 144 aa9.24□□□□□ -0.93
PPP4R1-202ENST00000400555 UBE2L6O14933 153 aa9.23□□□□□ -0.93
PPP4R1-202ENST00000400555 Q6ZTI0 123 aa9.23□□□□□ -0.93
PPP4R1-202ENST00000400555 TEN1Q86WV5 123 aa9.23□□□□□ -0.93
PPP4R1-202ENST00000400555 HELZ2Q9BYK8 2649 aaKnown RBP9.23□□□□□ -0.93
PPP4R1-202ENST00000400555 C2orf82Q6UX34 121 aa9.23□□□□□ -0.93
PPP4R1-202ENST00000400555 Q9H8V8 135 aa9.23□□□□□ -0.93
PPP4R1-202ENST00000400555 TRBV20-1A0A075B6N2 111 aa9.23□□□□□ -0.93
PPP4R1-202ENST00000400555 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.22□□□□□ -0.93
PPP4R1-202ENST00000400555 PRIMA1Q86XR5 153 aa9.22□□□□□ -0.93
PPP4R1-202ENST00000400555 RPL13AP40429 203 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms