RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 FAM27E3Q08E93 113 aa12.25□□□□□ -0.45
NPRL3-201ENST00000399953 BSNQ9UPA5 3926 aa12.25□□□□□ -0.45
NPRL3-201ENST00000399953 WNK2Q9Y3S1 2297 aa12.25□□□□□ -0.45
NPRL3-201ENST00000399953 TPRP12270 2363 aaKnown RBP12.25□□□□□ -0.45
NPRL3-201ENST00000399953 DNAL4O96015 105 aa12.24□□□□□ -0.45
NPRL3-201ENST00000399953 U3KQE9 123 aa12.24□□□□□ -0.45
NPRL3-201ENST00000399953 A8MZ25 164 aa12.24□□□□□ -0.45
NPRL3-201ENST00000399953 NDUFC2O95298 119 aa12.24□□□□□ -0.45
NPRL3-201ENST00000399953 CD28P10747 220 aa12.24□□□□□ -0.45
NPRL3-201ENST00000399953 FAM74A4Q5TZK3 123 aa12.24□□□□□ -0.45
NPRL3-201ENST00000399953 CLEC19AQ6UXS0 136 aa12.24□□□□□ -0.45
NPRL3-201ENST00000399953 APRG1Q8IVJ8 170 aa12.24□□□□□ -0.45
NPRL3-201ENST00000399953 C1orf43Q9BWL3 253 aa12.24□□□□□ -0.45
NPRL3-201ENST00000399953 MUC6Q6W4X9 2439 aa12.23□□□□□ -0.45
NPRL3-201ENST00000399953 A0A087WVE0 104 aa12.23□□□□□ -0.45
NPRL3-201ENST00000399953 FHL2Q14192 279 aa12.23□□□□□ -0.45
NPRL3-201ENST00000399953 LINC01561Q8N1V8 128 aa12.23□□□□□ -0.45
NPRL3-201ENST00000399953 LY6G5BQ8NDX9 201 aa12.23□□□□□ -0.45
NPRL3-201ENST00000399953 TINCRA0A1B0GVN0 87 aa12.23□□□□□ -0.45
NPRL3-201ENST00000399953 LINC00336Q6ZUF6 198 aa12.23□□□□□ -0.45
NPRL3-201ENST00000399953 APC2O95996 2303 aa12.22□□□□□ -0.45
NPRL3-201ENST00000399953 M0QY20 66 aa12.22□□□□□ -0.45
NPRL3-201ENST00000399953 PKDREJQ9NTG1 2253 aa12.22□□□□□ -0.45
NPRL3-201ENST00000399953 PRIMA1Q86XR5 153 aa12.22□□□□□ -0.45
NPRL3-201ENST00000399953 RNASE6Q93091 150 aaKnown RBP12.22□□□□□ -0.45
NPRL3-201ENST00000399953 CCDC140Q96MF4 163 aa12.22□□□□□ -0.45
NPRL3-201ENST00000399953 CIRBPQ14011 172 aaKnown RBP12.21□□□□□ -0.45
NPRL3-201ENST00000399953 FAM110DQ8TAY7 271 aaPredicted RBP12.21□□□□□ -0.45
NPRL3-201ENST00000399953 LINC00308Q8TCZ7 52 aa12.21□□□□□ -0.46
NPRL3-201ENST00000399953 IGHV7-81A0A0B4J1V7 117 aa12.2□□□□□ -0.46
NPRL3-201ENST00000399953 DEFB1P60022 68 aa12.2□□□□□ -0.46
NPRL3-201ENST00000399953 MAP1AP78559 2803 aaPredicted RBP12.2□□□□□ -0.46
NPRL3-201ENST00000399953 Q8N2B8 174 aa12.2□□□□□ -0.46
NPRL3-201ENST00000399953 PIMREGQ9BSJ6 248 aa12.2□□□□□ -0.46
NPRL3-201ENST00000399953 ZNF415Q09FC8 603 aa12.19□□□□□ -0.46
NPRL3-201ENST00000399953 FAM218AQ96MZ4 157 aa12.19□□□□□ -0.46
NPRL3-201ENST00000399953 NDUFA1O15239 70 aa12.18□□□□□ -0.46
NPRL3-201ENST00000399953 BSPH1Q075Z2 132 aa12.18□□□□□ -0.46
NPRL3-201ENST00000399953 FDCSPQ8NFU4 85 aa12.18□□□□□ -0.46
NPRL3-201ENST00000399953 FAM215AQ9Y5M1 114 aa12.18□□□□□ -0.46
NPRL3-201ENST00000399953 FAM223BA6NKX1 122 aa12.18□□□□□ -0.46
NPRL3-201ENST00000399953 ECSCRQ19T08 205 aa12.18□□□□□ -0.46
NPRL3-201ENST00000399953 FAM104AQ969W3 186 aa12.18□□□□□ -0.46
NPRL3-201ENST00000399953 COPS9Q8WXC6 57 aa12.17□□□□□ -0.46
NPRL3-201ENST00000399953 C9orf85Q96MD7 179 aa12.17□□□□□ -0.46
NPRL3-201ENST00000399953 LINC00846Q9NV44 126 aa12.17□□□□□ -0.46
NPRL3-201ENST00000399953 FAM236DA0A1B0GTK5 79 aa12.17□□□□□ -0.46
NPRL3-201ENST00000399953 FAM236CP0DP71 79 aa12.17□□□□□ -0.46
NPRL3-201ENST00000399953 RPL35AP18077 110 aaKnown RBP12.17□□□□□ -0.46
NPRL3-201ENST00000399953 PSMB8P28062 276 aa12.17□□□□□ -0.46
NPRL3-201ENST00000399953 Q8N6K4 173 aa12.17□□□□□ -0.46
NPRL3-201ENST00000399953 TMEM243Q9BU79 118 aa12.17□□□□□ -0.46
NPRL3-201ENST00000399953 ATRXP46100 2492 aa12.16□□□□□ -0.46
NPRL3-201ENST00000399953 EPM2AB3EWF7 344 aa12.16□□□□□ -0.46
NPRL3-201ENST00000399953 ABCA4P78363 2273 aa12.16□□□□□ -0.46
NPRL3-201ENST00000399953 F6UB75 175 aa12.16□□□□□ -0.46
NPRL3-201ENST00000399953 KLK9Q2XQG4 91 aa12.16□□□□□ -0.46
NPRL3-201ENST00000399953 Q9HAA7 133 aa12.16□□□□□ -0.46
NPRL3-201ENST00000399953 KLK9Q9UKQ9 250 aa12.16□□□□□ -0.46
NPRL3-201ENST00000399953 UBE2D4Q9Y2X8 147 aa12.16□□□□□ -0.46
NPRL3-201ENST00000399953 TRAV12-2A0A075B6T6 113 aa12.15□□□□□ -0.46
NPRL3-201ENST00000399953 SOCS3O14543 225 aa12.15□□□□□ -0.46
NPRL3-201ENST00000399953 SERP1Q9Y6X1 66 aa12.15□□□□□ -0.46
NPRL3-201ENST00000399953 RNASE13Q5GAN3 156 aaKnown RBP12.15□□□□□ -0.46
NPRL3-201ENST00000399953 FAM223AQ8IWN6 122 aa12.15□□□□□ -0.46
NPRL3-201ENST00000399953 DCHS2Q6V1P9 2916 aa12.14□□□□□ -0.47
NPRL3-201ENST00000399953 C14orf132Q9NPU4 83 aa12.14□□□□□ -0.47
NPRL3-201ENST00000399953 PRORYQ9H606 182 aa12.14□□□□□ -0.47
NPRL3-201ENST00000399953 PKIGQ9Y2B9 76 aa12.14□□□□□ -0.47
NPRL3-201ENST00000399953 IGF2RP11717 2491 aa12.14□□□□□ -0.47
NPRL3-201ENST00000399953 ODF3BA8MYP8 253 aa12.13□□□□□ -0.47
NPRL3-201ENST00000399953 TLN1Q9Y490 2541 aaKnown RBP12.13□□□□□ -0.47
NPRL3-201ENST00000399953 KLLNB2CW77 178 aa12.13□□□□□ -0.47
NPRL3-201ENST00000399953 GHRHP01286 108 aa12.13□□□□□ -0.47
NPRL3-201ENST00000399953 TMEM86BQ8N661 226 aa12.13□□□□□ -0.47
NPRL3-201ENST00000399953 DEFB124Q8NES8 71 aa12.13□□□□□ -0.47
NPRL3-201ENST00000399953 IGFL2Q6UWQ7 119 aa12.12□□□□□ -0.47
NPRL3-201ENST00000399953 SPTBN4Q9H254 2564 aa12.12□□□□□ -0.47
NPRL3-201ENST00000399953 LYNX1G3V0Z9 82 aa12.12□□□□□ -0.47
NPRL3-201ENST00000399953 IGHG2P01859 326 aa12.12□□□□□ -0.47
NPRL3-201ENST00000399953 LYNX1P0DP58 116 aa12.12□□□□□ -0.47
NPRL3-201ENST00000399953 RBMY1BA6NDE4 496 aaKnown RBP12.11□□□□□ -0.47
NPRL3-201ENST00000399953 RBMY1EA6NEQ0 496 aaKnown RBP12.11□□□□□ -0.47
NPRL3-201ENST00000399953 RBMY1DP0C7P1 496 aaKnown RBP12.11□□□□□ -0.47
NPRL3-201ENST00000399953 RBMY1A1P0DJD3 496 aaKnown RBP12.11□□□□□ -0.47
NPRL3-201ENST00000399953 RBMY1CP0DJD4 496 aa12.11□□□□□ -0.47
NPRL3-201ENST00000399953 RBMY1FQ15415 496 aaKnown RBP12.11□□□□□ -0.47
NPRL3-201ENST00000399953 SOSTDC1Q6X4U4 206 aa12.11□□□□□ -0.47
NPRL3-201ENST00000399953 Q8N9W7 124 aa12.11□□□□□ -0.47
NPRL3-201ENST00000399953 CHD8Q9HCK8 2581 aa12.11□□□□□ -0.47
NPRL3-201ENST00000399953 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
NPRL3-201ENST00000399953 OVOL2Q9BRP0 275 aa12.11□□□□□ -0.47
NPRL3-201ENST00000399953 SPTAN1Q13813 2472 aaKnown RBP12.1□□□□□ -0.47
NPRL3-201ENST00000399953 Q9H8V8 135 aa12.1□□□□□ -0.47
NPRL3-201ENST00000399953 A0A0U1RRA0 63 aa12.09□□□□□ -0.47
NPRL3-201ENST00000399953 TRBV12-3P01733 135 aa12.09□□□□□ -0.47
NPRL3-201ENST00000399953 HOXD3P31249 432 aaPredicted RBP12.09□□□□□ -0.47
NPRL3-201ENST00000399953 HIST2H2BCQ6DN03 193 aa12.09□□□□□ -0.47
NPRL3-201ENST00000399953 HIST2H2BDQ6DRA6 164 aa12.09□□□□□ -0.47
NPRL3-201ENST00000399953 OBSCN-AS1Q96MR7 158 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms