RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 TMEM158Q8WZ71 300 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 SHANK2-AS3Q9BTD1 123 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 ZNF706Q9Y5V0 76 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 IGLV5-37A0A075B6J1 123 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 IGHV1-24A0A0C4DH33 117 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 K7EMI3 77 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 SLURP1P55000 103 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 Q0VG73 95 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 LYZL1Q6UWQ5 148 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 ZNF414Q96IQ9 312 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 ITPR3Q14573 2671 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 A8MWL6 223 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 D6R8Y8 96 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 M0R378 163 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 CTSGP08311 255 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 IFI27P40305 119 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 C10orf99Q6UWK7 81 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 H3BRN7 92 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 CD5LO43866 347 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 SH2D1AO60880 128 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 IGLC2P0DOY2 106 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 SYNJ2BPP57105 145 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 Q8N9W7 124 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 TTTY13Q9BZ97 58 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 SMAD5-AS1Q9Y6J3 95 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 LY96Q9Y6Y9 160 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 IGLV11-55A0A075B6I3 123 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 C19orf71A6NCJ1 209 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 ZNF73O43830 326 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 IGKV3-20P01619 116 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 MT-ND6P03923 174 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 BLCAPP62952 87 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 TWIST1Q15672 202 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 NBEAL2Q6ZNJ1 2754 aa4.52□□□□□ -1.69
TRAPPC13-202ENST00000399438 COX7A2LO14548 114 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 IFITM1P13164 125 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 TMEM61Q8N0U2 210 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 KLK15Q9H2R5 256 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 APCP25054 2843 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 AKAP9Q99996 3911 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 TAX1BP3O14907 124 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 LEPROTL1O95214 131 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 Q6ZRP5 223 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 PRSS3P2Q8NHM4 247 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 WWC2-AS2Q96NR7 200 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 A0A1B0GUT8 65 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 C2orf70A6NJV1 201 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 ODF3BA8MYP8 253 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 IGLC3P0DOY3 106 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 AMTNQ6UX39 209 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
TRAPPC13-202ENST00000399438 TMEM258P61165 79 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 Q6ZUT4 128 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 IGHV4-30-2A0A087WSY4 118 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 INS-IGF2F8WCM5 200 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 RRN3P1Q2M238 152 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 GCN1Q92616 2671 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 TRAV9-1A0A075B6T8 112 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 TRAV9-2A0A087WT02 112 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 IGHV1-58A0A0C4DH39 117 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 H3BUX3 64 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 NPYP01303 97 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 TRGV3P03979 118 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 CSN1S1P47710 185 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 MPV17L2Q567V2 206 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 WFDC11Q8NEX6 87 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 TOMM6Q96B49 74 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 RABAC1Q9UI14 185 aa4.5□□□□□ -1.69
TRAPPC13-202ENST00000399438 NDUFA3O95167 84 aa4.49□□□□□ -1.69
TRAPPC13-202ENST00000399438 PCP2Q8IVA1 136 aa4.49□□□□□ -1.69
TRAPPC13-202ENST00000399438 SYS1-DBNDD2H3BUS1 97 aa4.49□□□□□ -1.69
TRAPPC13-202ENST00000399438 PRSS1P07477 247 aa4.49□□□□□ -1.69
TRAPPC13-202ENST00000399438 SLC25A34Q6PIV7 304 aa4.49□□□□□ -1.69
TRAPPC13-202ENST00000399438 Q6YL49 198 aa4.49□□□□□ -1.69
TRAPPC13-202ENST00000399438 LCA10Q71F78 164 aa4.49□□□□□ -1.69
TRAPPC13-202ENST00000399438 OR4B1Q8NGF8 309 aa4.49□□□□□ -1.69
TRAPPC13-202ENST00000399438 OR10AG1Q8NH19 301 aa4.49□□□□□ -1.69
TRAPPC13-202ENST00000399438 ZNF492Q9P255 531 aa4.49□□□□□ -1.69
TRAPPC13-202ENST00000399438 IGLL5B9A064 214 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 CKS2P33552 79 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 EFNA4P52798 201 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 PRR9Q5T870 116 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 NPBQ8NG41 125 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 FLNBO75369 2602 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 TENM4Q6N022 2769 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 H3BVH4 76 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 PRSS2P07478 247 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 HTN1P15515 57 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 MRPL51Q4U2R6 128 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 PRELID3AQ96N28 172 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 AGPAT4-IT1Q9H0P7 198 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 UQCR10Q9UDW1 63 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 CLPSL1A2RUU4 121 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 A8MWV9 139 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 M0R1W7 72 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 MT-ATP8P03928 68 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 PRM2P04554 102 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 COX6B1P14854 86 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 GPHB5Q86YW7 130 aa4.48□□□□□ -1.69
TRAPPC13-202ENST00000399438 FABP2P12104 132 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms