RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 Q8N814 137 aa9.33□□□□□ -0.92
HLA-DQB1-202ENST00000399079 BAALCQ8WXS3 180 aa9.33□□□□□ -0.92
HLA-DQB1-202ENST00000399079 TMEM243Q9BU79 118 aa9.33□□□□□ -0.92
HLA-DQB1-202ENST00000399079 HSPG2P98160 4391 aa9.32□□□□□ -0.92
HLA-DQB1-202ENST00000399079 CRPP02741 224 aa9.32□□□□□ -0.92
HLA-DQB1-202ENST00000399079 AMTP48728 403 aa9.32□□□□□ -0.92
HLA-DQB1-202ENST00000399079 PKIAP61925 76 aa9.32□□□□□ -0.92
HLA-DQB1-202ENST00000399079 Q0VG73 95 aa9.32□□□□□ -0.92
HLA-DQB1-202ENST00000399079 LINC00269Q8N2A0 174 aa9.32□□□□□ -0.92
HLA-DQB1-202ENST00000399079 RMI2Q96E14 147 aa9.32□□□□□ -0.92
HLA-DQB1-202ENST00000399079 COX11Q9Y6N1 276 aa9.32□□□□□ -0.92
HLA-DQB1-202ENST00000399079 SMKR1H3BMG3 65 aa9.31□□□□□ -0.92
HLA-DQB1-202ENST00000399079 CAMPP49913 170 aa9.31□□□□□ -0.92
HLA-DQB1-202ENST00000399079 NDUFA5Q16718 116 aa9.31□□□□□ -0.92
HLA-DQB1-202ENST00000399079 RYR1P21817 5038 aa9.31□□□□□ -0.92
HLA-DQB1-202ENST00000399079 IGLV4-60A0A075B6I1 120 aa9.31□□□□□ -0.92
HLA-DQB1-202ENST00000399079 CDK2AP2O75956 126 aa9.31□□□□□ -0.92
HLA-DQB1-202ENST00000399079 NCR2O95944 276 aa9.31□□□□□ -0.92
HLA-DQB1-202ENST00000399079 KRTAP10-1P60331 282 aa9.31□□□□□ -0.92
HLA-DQB1-202ENST00000399079 MRPL54Q6P161 138 aaKnown RBP9.31□□□□□ -0.92
HLA-DQB1-202ENST00000399079 C20orf203Q8NBC4 194 aa9.31□□□□□ -0.92
HLA-DQB1-202ENST00000399079 C1orf43Q9BWL3 253 aa9.31□□□□□ -0.92
HLA-DQB1-202ENST00000399079 KRTAP17-1Q9BYP8 105 aa9.31□□□□□ -0.92
HLA-DQB1-202ENST00000399079 PRR34Q9NV39 138 aa9.31□□□□□ -0.92
HLA-DQB1-202ENST00000399079 IGLV5-52A0A0A0MRZ9 124 aa9.3□□□□□ -0.92
HLA-DQB1-202ENST00000399079 TRBV6-5A0A0K0K1A5 114 aa9.3□□□□□ -0.92
HLA-DQB1-202ENST00000399079 UBE2L6O14933 153 aa9.3□□□□□ -0.92
HLA-DQB1-202ENST00000399079 MRAP2Q96G30 205 aa9.3□□□□□ -0.92
HLA-DQB1-202ENST00000399079 ST20Q9HBF5 79 aa9.3□□□□□ -0.92
HLA-DQB1-202ENST00000399079 APOBP04114 4563 aaKnown RBP9.3□□□□□ -0.92
HLA-DQB1-202ENST00000399079 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.29□□□□□ -0.92
HLA-DQB1-202ENST00000399079 A0A1B0GUV1 79 aa9.29□□□□□ -0.92
HLA-DQB1-202ENST00000399079 IGKV2-29A2NJV5 120 aaPredicted RBP9.29□□□□□ -0.92
HLA-DQB1-202ENST00000399079 I3L3M4 83 aa9.29□□□□□ -0.92
HLA-DQB1-202ENST00000399079 PMCHP20382 165 aa9.29□□□□□ -0.92
HLA-DQB1-202ENST00000399079 MIAQ16674 131 aa9.29□□□□□ -0.92
HLA-DQB1-202ENST00000399079 FAM104BQ5XKR9 115 aa9.29□□□□□ -0.92
HLA-DQB1-202ENST00000399079 TMEM70Q9BUB7 260 aa9.29□□□□□ -0.92
HLA-DQB1-202ENST00000399079 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.28□□□□□ -0.92
HLA-DQB1-202ENST00000399079 GCSHP23434 173 aa9.28□□□□□ -0.92
HLA-DQB1-202ENST00000399079 POLR2KP53803 58 aaKnown RBP9.28□□□□□ -0.92
HLA-DQB1-202ENST00000399079 REG3AQ06141 175 aa9.28□□□□□ -0.92
HLA-DQB1-202ENST00000399079 PNRC1Q12796 327 aaPredicted RBP9.28□□□□□ -0.92
HLA-DQB1-202ENST00000399079 MRPL51Q4U2R6 128 aaKnown RBP9.28□□□□□ -0.92
HLA-DQB1-202ENST00000399079 IGLV10-54A0A075B6I4 117 aa9.27□□□□□ -0.93
HLA-DQB1-202ENST00000399079 APCSP02743 223 aa9.27□□□□□ -0.93
HLA-DQB1-202ENST00000399079 ADCYAP1P18509 176 aa9.27□□□□□ -0.93
HLA-DQB1-202ENST00000399079 NRACQ8N912 160 aa9.27□□□□□ -0.93
HLA-DQB1-202ENST00000399079 NTN5Q8WTR8 489 aaPredicted RBP9.27□□□□□ -0.93
HLA-DQB1-202ENST00000399079 TMEM242Q9NWH2 141 aa9.27□□□□□ -0.93
HLA-DQB1-202ENST00000399079 A0A1B0GW15 77 aa9.26□□□□□ -0.93
HLA-DQB1-202ENST00000399079 A0A1B0GXF2 115 aa9.26□□□□□ -0.93
HLA-DQB1-202ENST00000399079 PPP1R2P9O14990 202 aa9.26□□□□□ -0.93
HLA-DQB1-202ENST00000399079 TSHBP01222 138 aa9.26□□□□□ -0.93
HLA-DQB1-202ENST00000399079 HLA-DQA1P01909 254 aa9.26□□□□□ -0.93
HLA-DQB1-202ENST00000399079 HBBP68871 147 aa9.26□□□□□ -0.93
HLA-DQB1-202ENST00000399079 TRBV27A0A0K0K1C4 114 aa9.26□□□□□ -0.93
HLA-DQB1-202ENST00000399079 KRTAP26-1Q6PEX3 210 aa9.26□□□□□ -0.93
HLA-DQB1-202ENST00000399079 TMEM218A2RU14 115 aa9.25□□□□□ -0.93
HLA-DQB1-202ENST00000399079 ATP6V1G1O75348 118 aa9.25□□□□□ -0.93
HLA-DQB1-202ENST00000399079 MT-ND4LP03901 98 aa9.25□□□□□ -0.93
HLA-DQB1-202ENST00000399079 AMMECR1LQ6DCA0 310 aa9.25□□□□□ -0.93
HLA-DQB1-202ENST00000399079 RNASEKQ6P5S7 137 aaKnown RBP9.25□□□□□ -0.93
HLA-DQB1-202ENST00000399079 UQCC3Q6UW78 93 aa9.25□□□□□ -0.93
HLA-DQB1-202ENST00000399079 ANAPC16Q96DE5 110 aa9.25□□□□□ -0.93
HLA-DQB1-202ENST00000399079 KRTAP4-5Q9BYR2 181 aa9.25□□□□□ -0.93
HLA-DQB1-202ENST00000399079 IGKV3OR2-268A0A0C4DH90 116 aa9.24□□□□□ -0.93
HLA-DQB1-202ENST00000399079 F8W036 122 aa9.24□□□□□ -0.93
HLA-DQB1-202ENST00000399079 FGF6P10767 208 aa9.24□□□□□ -0.93
HLA-DQB1-202ENST00000399079 ESDP10768 282 aa9.24□□□□□ -0.93
HLA-DQB1-202ENST00000399079 CKS2P33552 79 aa9.24□□□□□ -0.93
HLA-DQB1-202ENST00000399079 XGP55808 180 aa9.24□□□□□ -0.93
HLA-DQB1-202ENST00000399079 SUMO2P61956 95 aaKnown RBP9.24□□□□□ -0.93
HLA-DQB1-202ENST00000399079 LINC01620Q4KN68 170 aa9.24□□□□□ -0.93
HLA-DQB1-202ENST00000399079 LINC00862A6NCI5 91 aa9.23□□□□□ -0.93
HLA-DQB1-202ENST00000399079 D6R8Y8 96 aa9.23□□□□□ -0.93
HLA-DQB1-202ENST00000399079 PPP1R17O96001 155 aa9.23□□□□□ -0.93
HLA-DQB1-202ENST00000399079 S100A8P05109 93 aa9.23□□□□□ -0.93
HLA-DQB1-202ENST00000399079 COMMD7Q86VX2 200 aa9.23□□□□□ -0.93
HLA-DQB1-202ENST00000399079 USP17L23D6RBM5 183 aa9.22□□□□□ -0.93
HLA-DQB1-202ENST00000399079 H7C423 109 aa9.22□□□□□ -0.93
HLA-DQB1-202ENST00000399079 VCYO14598 125 aa9.22□□□□□ -0.93
HLA-DQB1-202ENST00000399079 HAMPP81172 84 aa9.22□□□□□ -0.93
HLA-DQB1-202ENST00000399079 ATP5L2Q7Z4Y8 100 aa9.22□□□□□ -0.93
HLA-DQB1-202ENST00000399079 TRBV24-1A0A075B6N3 115 aa9.21□□□□□ -0.93
HLA-DQB1-202ENST00000399079 TRAV8-4A0A0B4J246 113 aa9.21□□□□□ -0.93
HLA-DQB1-202ENST00000399079 TNFRSF6BO95407 300 aa9.21□□□□□ -0.93
HLA-DQB1-202ENST00000399079 FAM30AQ9NZY2 134 aa9.21□□□□□ -0.93
HLA-DQB1-202ENST00000399079 FCER1GP30273 86 aa9.21□□□□□ -0.94
HLA-DQB1-202ENST00000399079 C7orf77A4D0Y5 90 aa9.2□□□□□ -0.94
HLA-DQB1-202ENST00000399079 NPYP01303 97 aa9.2□□□□□ -0.94
HLA-DQB1-202ENST00000399079 PRSS1P07477 247 aa9.2□□□□□ -0.94
HLA-DQB1-202ENST00000399079 S100A1P23297 94 aa9.2□□□□□ -0.94
HLA-DQB1-202ENST00000399079 KIR2DL4Q99706 377 aa9.2□□□□□ -0.94
HLA-DQB1-202ENST00000399079 C20orf78Q9BR46 151 aa9.2□□□□□ -0.94
HLA-DQB1-202ENST00000399079 SEC11CQ9BY50 192 aa9.2□□□□□ -0.94
HLA-DQB1-202ENST00000399079 PCLOQ9Y6V0 5065 aa9.19□□□□□ -0.94
HLA-DQB1-202ENST00000399079 ZNF25P17030 456 aaPredicted RBP9.19□□□□□ -0.94
HLA-DQB1-202ENST00000399079 Q8N1X5 172 aa9.19□□□□□ -0.94
HLA-DQB1-202ENST00000399079 TMEM101Q96IK0 257 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms