RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 IGHV3-38A0A0C4DH36 116 aa7.31□□□□□ -1.24
PTCHD4-202ENST00000398738 H7C423 109 aa7.31□□□□□ -1.24
PTCHD4-202ENST00000398738 COX6CP09669 75 aa7.31□□□□□ -1.24
PTCHD4-202ENST00000398738 NDUFA12Q9UI09 145 aa7.31□□□□□ -1.24
PTCHD4-202ENST00000398738 ICOSQ9Y6W8 199 aa7.31□□□□□ -1.24
PTCHD4-202ENST00000398738 SETD2Q9BYW2 2564 aaPredicted RBP7.31□□□□□ -1.24
PTCHD4-202ENST00000398738 IGLV4-3A0A075B6K6 122 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 M0QY20 66 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 SOCS3O14543 225 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 WNK1Q9H4A3 2382 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 A0A0B4J2C4 111 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 TRBV27A0A0K0K1C4 114 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 C20orf203Q8NBC4 194 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 LGALS9O00182 355 aa7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 RPL13AP40429 203 aaKnown RBP7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 IGKV2-29A2NJV5 120 aaPredicted RBP7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 NDUFA4O00483 81 aa7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 RS1O15537 224 aa7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 LINC00482Q8N8I6 264 aa7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 MOB4Q9Y3A3 225 aa7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 MYO9AB2RTY4 2548 aa7.28□□□□□ -1.24
PTCHD4-202ENST00000398738 TRGV11A0A075B6L2 103 aa7.28□□□□□ -1.24
PTCHD4-202ENST00000398738 H3BUX3 64 aa7.28□□□□□ -1.24
PTCHD4-202ENST00000398738 I3L3M4 83 aa7.28□□□□□ -1.24
PTCHD4-202ENST00000398738 PIEZO1Q92508 2521 aa7.27□□□□□ -1.24
PTCHD4-202ENST00000398738 IGHV3-16A0A0C4DH30 117 aa7.27□□□□□ -1.24
PTCHD4-202ENST00000398738 FAM223BA6NKX1 122 aa7.27□□□□□ -1.24
PTCHD4-202ENST00000398738 C10orf99Q6UWK7 81 aa7.27□□□□□ -1.24
PTCHD4-202ENST00000398738 FAM223AQ8IWN6 122 aa7.27□□□□□ -1.24
PTCHD4-202ENST00000398738 DAZ1Q9NQZ3 744 aaKnown RBP7.27□□□□□ -1.24
PTCHD4-202ENST00000398738 FAM236AA0A1B0GUQ0 79 aa7.27□□□□□ -1.25
PTCHD4-202ENST00000398738 FAM236BA0A1B0GV22 79 aa7.27□□□□□ -1.25
PTCHD4-202ENST00000398738 ID1P41134 155 aa7.27□□□□□ -1.25
PTCHD4-202ENST00000398738 KLLNB2CW77 178 aa7.27□□□□□ -1.25
PTCHD4-202ENST00000398738 CENPEQ02224 2701 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 TRBV30A0A0K0K1B3 111 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 MED14OSP0DP75 135 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 C11orf71Q6IPW1 123 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 POLQO75417 2590 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 USP9XQ93008 2570 aaPredicted RBP7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 IGHV4-38-2P0DP08 117 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 ADORA2A-AS1P86434 159 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 POM121L12Q8N7R1 296 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 TNFRSF18Q9Y5U5 241 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 SYNJ2BPP57105 145 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 FAM19A4Q96LR4 140 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 PTPN13Q12923 2485 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 SPTBN4Q9H254 2564 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 IGHV1OR15-1A0A075B7D0 117 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 NXPH4O95158 308 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 LMO4P61968 165 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 TLN2Q9Y4G6 2542 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 IGHV1-69P01742 117 aa7.24□□□□□ -1.25
PTCHD4-202ENST00000398738 RHOHQ15669 191 aa7.24□□□□□ -1.25
PTCHD4-202ENST00000398738 DGAT2L7PQ6IED9 249 aa7.24□□□□□ -1.25
PTCHD4-202ENST00000398738 LITAFQ99732 161 aa7.24□□□□□ -1.25
PTCHD4-202ENST00000398738 CELSR2Q9HCU4 2923 aa7.24□□□□□ -1.25
PTCHD4-202ENST00000398738 NSUN5P1Q3KNT7 163 aa7.24□□□□□ -1.25
PTCHD4-202ENST00000398738 IGHV1-58A0A0C4DH39 117 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 TRBV6-5A0A0K0K1A5 114 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 A0A1W2PRX2 142 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 HOXD3P31249 432 aaPredicted RBP7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 CDKN2A-AS1Q9UH64 79 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 HIST2H2BDQ6DRA6 164 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 DCANP1Q8TF63 244 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 KLK5Q9Y337 293 aaPredicted RBP7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 SNRPD3P62318 126 aaKnown RBP7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 MIAQ16674 131 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 TMEM61Q8N0U2 210 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 PPDPFQ9H3Y8 114 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 NDUFA7O95182 113 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 MRPL23Q16540 153 aaKnown RBP7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 LST1O00453 97 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 Q6ZSN1 163 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 VSIG2Q96IQ7 327 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 C9orf85Q96MD7 179 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 IGHV3OR16-12A0A075B7B8 117 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 TMEM101Q96IK0 257 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 Q9H8V8 135 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 JMJD1CQ15652 2540 aa7.21□□□□□ -1.25
PTCHD4-202ENST00000398738 SONP18583 2426 aaKnown RBP7.21□□□□□ -1.25
PTCHD4-202ENST00000398738 TRAV13-1A0A0B4J241 112 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 H3BT86 120 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 C9orf153Q5TBE3 101 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 APRG1Q8IVJ8 170 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 USMG5Q96IX5 58 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 Q9HAA7 133 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 ZANQ9Y493 2812 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 A0A0J9YX75 114 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 Q8N2B8 174 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 FAM110AQ9BQ89 295 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 LINC00467Q9BRT7 94 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 KMT2BQ9UMN6 2715 aaPredicted RBP7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 ABCA2Q9BZC7 2435 aa7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 IGKV3OR2-268A0A0C4DH90 116 aa7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 LOC107984640A0A0U1RRK4 108 aa7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 GYPEP15421 78 aa7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 KLRB1Q12918 225 aa7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 GAGE2AQ6NT46 116 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms