RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 RRN3P1Q2M238 152 aa18.51■□□□□ 0.55
SHARPIN-202ENST00000398712 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.51■□□□□ 0.55
SHARPIN-202ENST00000398712 ORAOV1Q8WV07 137 aa18.51■□□□□ 0.55
SHARPIN-202ENST00000398712 Q9UF83 564 aa18.51■□□□□ 0.55
SHARPIN-202ENST00000398712 HERVK_113P61574 105 aa18.5■□□□□ 0.55
SHARPIN-202ENST00000398712 CITED1Q99966 193 aa18.5■□□□□ 0.55
SHARPIN-202ENST00000398712 ZNF479Q96JC4 524 aa18.5■□□□□ 0.55
SHARPIN-202ENST00000398712 CHAC1Q9BUX1 264 aa18.5■□□□□ 0.55
SHARPIN-202ENST00000398712 FN1P02751 2386 aaKnown RBP18.49■□□□□ 0.55
SHARPIN-202ENST00000398712 PLAC8L1A1L4L8 177 aa18.49■□□□□ 0.55
SHARPIN-202ENST00000398712 NPSP0C0P6 89 aa18.49■□□□□ 0.55
SHARPIN-202ENST00000398712 GAGE1Q13065 139 aa18.49■□□□□ 0.55
SHARPIN-202ENST00000398712 MAPKAPK5-AS1Q8N8E1 139 aa18.49■□□□□ 0.55
SHARPIN-202ENST00000398712 IGLV4-3A0A075B6K6 122 aa18.48■□□□□ 0.55
SHARPIN-202ENST00000398712 COTL1Q14019 142 aa18.48■□□□□ 0.55
SHARPIN-202ENST00000398712 OPRPNQ99935 248 aaPredicted RBP18.48■□□□□ 0.55
SHARPIN-202ENST00000398712 TRBV10-1A0A0K0K1A3 114 aa18.47■□□□□ 0.55
SHARPIN-202ENST00000398712 A6NDN8 102 aa18.47■□□□□ 0.55
SHARPIN-202ENST00000398712 OVOL2Q9BRP0 275 aa18.47■□□□□ 0.55
SHARPIN-202ENST00000398712 PRADC1Q9BSG0 188 aa18.47■□□□□ 0.55
SHARPIN-202ENST00000398712 VCX2Q9H322 139 aa18.47■□□□□ 0.55
SHARPIN-202ENST00000398712 K7EQD1 137 aa18.47■□□□□ 0.55
SHARPIN-202ENST00000398712 CRYBA4P53673 196 aa18.47■□□□□ 0.55
SHARPIN-202ENST00000398712 EMP1P54849 157 aa18.47■□□□□ 0.55
SHARPIN-202ENST00000398712 NFE4Q86UQ8 179 aa18.47■□□□□ 0.55
SHARPIN-202ENST00000398712 CHCHD7Q9BUK0 85 aa18.47■□□□□ 0.55
SHARPIN-202ENST00000398712 C2CD3Q4AC94 2353 aa18.46■□□□□ 0.55
SHARPIN-202ENST00000398712 NIPBLQ6KC79 2804 aaeCLIP18.46■□□□□ 0.55
SHARPIN-202ENST00000398712 TAX1BP3O14907 124 aa18.46■□□□□ 0.55
SHARPIN-202ENST00000398712 CIDEAO60543 219 aa18.46■□□□□ 0.55
SHARPIN-202ENST00000398712 MYMXA0A1B0GTQ4 84 aa18.45■□□□□ 0.54
SHARPIN-202ENST00000398712 PHLDA1Q8WV24 401 aaPredicted RBP18.45■□□□□ 0.54
SHARPIN-202ENST00000398712 SPANXA1Q9NS26 97 aa18.45■□□□□ 0.54
SHARPIN-202ENST00000398712 TRBV7-3A0A075B6L6 115 aa18.45■□□□□ 0.54
SHARPIN-202ENST00000398712 RPL36AP83881 106 aaKnown RBP18.44■□□□□ 0.54
SHARPIN-202ENST00000398712 Q6ZVH6 145 aa18.44■□□□□ 0.54
SHARPIN-202ENST00000398712 ZNRF2Q8NHG8 242 aa18.44■□□□□ 0.54
SHARPIN-202ENST00000398712 RPL36ALQ969Q0 106 aaKnown RBP18.44■□□□□ 0.54
SHARPIN-202ENST00000398712 IGHV3-38A0A0C4DH36 116 aa18.43■□□□□ 0.54
SHARPIN-202ENST00000398712 TMEM170BQ5T4T1 132 aa18.43■□□□□ 0.54
SHARPIN-202ENST00000398712 TRGV2A0A075B6R0 118 aa18.42■□□□□ 0.54
SHARPIN-202ENST00000398712 GAGE12BA1L429 117 aa18.42■□□□□ 0.54
SHARPIN-202ENST00000398712 GAGE7O76087 117 aa18.42■□□□□ 0.54
SHARPIN-202ENST00000398712 GAGE12FP0CL80 117 aa18.42■□□□□ 0.54
SHARPIN-202ENST00000398712 GAGE12GP0CL81 117 aa18.42■□□□□ 0.54
SHARPIN-202ENST00000398712 GAGE12IP0CL82 117 aa18.42■□□□□ 0.54
SHARPIN-202ENST00000398712 TAL2Q16559 108 aa18.42■□□□□ 0.54
SHARPIN-202ENST00000398712 AMELXQ99217 191 aa18.42■□□□□ 0.54
SHARPIN-202ENST00000398712 SPATA3Q8NHX4 192 aa18.41■□□□□ 0.54
SHARPIN-202ENST00000398712 UBE2D4Q9Y2X8 147 aa18.4■□□□□ 0.54
SHARPIN-202ENST00000398712 SLC25A29Q8N8R3 303 aa18.4■□□□□ 0.54
SHARPIN-202ENST00000398712 JMJD1CQ15652 2540 aa18.39■□□□□ 0.53
SHARPIN-202ENST00000398712 GCSHP23434 173 aa18.39■□□□□ 0.53
SHARPIN-202ENST00000398712 DAZ4Q86SG3 579 aaKnown RBP18.39■□□□□ 0.53
SHARPIN-202ENST00000398712 DAZ3Q9NR90 486 aaKnown RBP18.39■□□□□ 0.53
SHARPIN-202ENST00000398712 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.38■□□□□ 0.53
SHARPIN-202ENST00000398712 IGKV2-29A2NJV5 120 aaPredicted RBP18.38■□□□□ 0.53
SHARPIN-202ENST00000398712 ZNF815PA8K554 130 aa18.38■□□□□ 0.53
SHARPIN-202ENST00000398712 CEND1Q8N111 149 aa18.37■□□□□ 0.53
SHARPIN-202ENST00000398712 FAM104AQ969W3 186 aa18.37■□□□□ 0.53
SHARPIN-202ENST00000398712 H3BRM9 83 aa18.37■□□□□ 0.53
SHARPIN-202ENST00000398712 CEMP1Q6PRD7 247 aaPredicted RBP18.37■□□□□ 0.53
SHARPIN-202ENST00000398712 UBE2D3P61077 147 aa18.36■□□□□ 0.53
SHARPIN-202ENST00000398712 UBE2D2P62837 147 aa18.36■□□□□ 0.53
SHARPIN-202ENST00000398712 TM2D2Q9BX73 214 aa18.36■□□□□ 0.53
SHARPIN-202ENST00000398712 A0A0J9YXV3 536 aa18.35■□□□□ 0.53
SHARPIN-202ENST00000398712 TIMM21Q9BVV7 248 aa18.35■□□□□ 0.53
SHARPIN-202ENST00000398712 TRBV6-4A0A1B0GX49 114 aa18.35■□□□□ 0.53
SHARPIN-202ENST00000398712 TMEM223A0PJW6 202 aa18.34■□□□□ 0.53
SHARPIN-202ENST00000398712 SMIM9A6NGZ8 99 aa18.34■□□□□ 0.53
SHARPIN-202ENST00000398712 ZNF22P17026 224 aaPredicted RBP18.34■□□□□ 0.53
SHARPIN-202ENST00000398712 HIST1H4GQ99525 98 aa18.34■□□□□ 0.53
SHARPIN-202ENST00000398712 TRGV4A0A0C4DH28 118 aa18.33■□□□□ 0.53
SHARPIN-202ENST00000398712 GAGE12JA6NER3 117 aa18.33■□□□□ 0.53
SHARPIN-202ENST00000398712 PTTG1IPP53801 180 aa18.33■□□□□ 0.53
SHARPIN-202ENST00000398712 FXYD2P54710 66 aa18.33■□□□□ 0.53
SHARPIN-202ENST00000398712 MRPS36P82909 103 aaKnown RBP18.33■□□□□ 0.53
SHARPIN-202ENST00000398712 GAGE4Q13068 117 aa18.33■□□□□ 0.53
SHARPIN-202ENST00000398712 GAGE5Q13069 117 aa18.33■□□□□ 0.53
SHARPIN-202ENST00000398712 GAGE13Q4V321 117 aa18.33■□□□□ 0.53
SHARPIN-202ENST00000398712 VAMP3Q15836 100 aa18.32■□□□□ 0.52
SHARPIN-202ENST00000398712 SCGB1D4Q6XE38 83 aa18.32■□□□□ 0.52
SHARPIN-202ENST00000398712 KIR2DL5BQ8NHK3 375 aa18.32■□□□□ 0.52
SHARPIN-202ENST00000398712 WFDC9Q8NEX5 89 aa18.32■□□□□ 0.52
SHARPIN-202ENST00000398712 LEPROTO15243 131 aa18.31■□□□□ 0.52
SHARPIN-202ENST00000398712 Q6ZUT4 128 aa18.31■□□□□ 0.52
SHARPIN-202ENST00000398712 J3QQQ9 107 aa18.3■□□□□ 0.52
SHARPIN-202ENST00000398712 SMIM13P0DJ93 91 aa18.3■□□□□ 0.52
SHARPIN-202ENST00000398712 LGALS3P17931 250 aaKnown RBP18.3■□□□□ 0.52
SHARPIN-202ENST00000398712 SMAGPQ0VAQ4 97 aa18.3■□□□□ 0.52
SHARPIN-202ENST00000398712 UBE2V1Q13404 147 aa18.3■□□□□ 0.52
SHARPIN-202ENST00000398712 DGAT2L7PQ6IED9 249 aa18.3■□□□□ 0.52
SHARPIN-202ENST00000398712 RNASE13Q5GAN3 156 aaKnown RBP18.3■□□□□ 0.52
SHARPIN-202ENST00000398712 TINCRA0A1B0GVN0 87 aa18.29■□□□□ 0.52
SHARPIN-202ENST00000398712 C9orf118A6NHY6 69 aa18.29■□□□□ 0.52
SHARPIN-202ENST00000398712 APOC4P55056 127 aa18.29■□□□□ 0.52
SHARPIN-202ENST00000398712 GTSF1LQ9H1H1 148 aa18.29■□□□□ 0.52
SHARPIN-202ENST00000398712 X6R8D5 127 aa18.29■□□□□ 0.52
SHARPIN-202ENST00000398712 TSPEAR-AS2P59090 65 aa18.28■□□□□ 0.52
SHARPIN-202ENST00000398712 FHL2Q14192 279 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms