RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 PPBPP02775 128 aa17.24■□□□□ 0.35
U2AF1-203ENST00000398137 TTC32Q5I0X7 151 aa17.24■□□□□ 0.35
U2AF1-203ENST00000398137 ORMDL3Q8N138 153 aa17.24■□□□□ 0.35
U2AF1-203ENST00000398137 Q8N3U1 123 aa17.24■□□□□ 0.35
U2AF1-203ENST00000398137 TNFRSF6BO95407 300 aa17.23■□□□□ 0.35
U2AF1-203ENST00000398137 HLA-DQA1P01909 254 aa17.23■□□□□ 0.35
U2AF1-203ENST00000398137 SUMO2P61956 95 aaKnown RBP17.23■□□□□ 0.35
U2AF1-203ENST00000398137 PRELID3AQ96N28 172 aa17.23■□□□□ 0.35
U2AF1-203ENST00000398137 HSPG2P98160 4391 aa17.23■□□□□ 0.35
U2AF1-203ENST00000398137 TRBV25-1A0A075B6N4 114 aa17.22■□□□□ 0.35
U2AF1-203ENST00000398137 IGHV1-24A0A0C4DH33 117 aa17.22■□□□□ 0.35
U2AF1-203ENST00000398137 IGHV3-30P01768 117 aa17.22■□□□□ 0.35
U2AF1-203ENST00000398137 IGHV3-33P01772 117 aa17.22■□□□□ 0.35
U2AF1-203ENST00000398137 IGHV3-30-3P0DP02 117 aa17.22■□□□□ 0.35
U2AF1-203ENST00000398137 IGHV3-30-5P0DP03 117 aa17.22■□□□□ 0.35
U2AF1-203ENST00000398137 PMCHP20382 165 aa17.22■□□□□ 0.35
U2AF1-203ENST00000398137 LINC01556Q5JQF7 62 aa17.22■□□□□ 0.35
U2AF1-203ENST00000398137 CHCHD5Q9BSY4 110 aa17.22■□□□□ 0.35
U2AF1-203ENST00000398137 GNB1LQ9BYB4 327 aa17.22■□□□□ 0.35
U2AF1-203ENST00000398137 I3L3M4 83 aa17.21■□□□□ 0.35
U2AF1-203ENST00000398137 AMTP48728 403 aa17.21■□□□□ 0.35
U2AF1-203ENST00000398137 POLR2KP53803 58 aaKnown RBP17.21■□□□□ 0.35
U2AF1-203ENST00000398137 IQCJQ1A5X6 159 aa17.21■□□□□ 0.35
U2AF1-203ENST00000398137 NIT1Q86X76 327 aa17.21■□□□□ 0.35
U2AF1-203ENST00000398137 SMCO4Q9NRQ5 59 aa17.21■□□□□ 0.35
U2AF1-203ENST00000398137 TRBV24-1A0A075B6N3 115 aa17.2■□□□□ 0.34
U2AF1-203ENST00000398137 APCSP02743 223 aa17.2■□□□□ 0.34
U2AF1-203ENST00000398137 COX19Q49B96 90 aa17.2■□□□□ 0.34
U2AF1-203ENST00000398137 YPEL4Q96NS1 127 aa17.2■□□□□ 0.34
U2AF1-203ENST00000398137 TRBV27A0A0K0K1C4 114 aa17.19■□□□□ 0.34
U2AF1-203ENST00000398137 C20orf78Q9BR46 151 aa17.19■□□□□ 0.34
U2AF1-203ENST00000398137 TMEM243Q9BU79 118 aa17.19■□□□□ 0.34
U2AF1-203ENST00000398137 PHOX2AO14813 284 aa17.18■□□□□ 0.34
U2AF1-203ENST00000398137 TSHBP01222 138 aa17.18■□□□□ 0.34
U2AF1-203ENST00000398137 KIAA1644Q3SXP7 199 aa17.18■□□□□ 0.34
U2AF1-203ENST00000398137 TRAV9-2A0A087WT02 112 aa17.17■□□□□ 0.34
U2AF1-203ENST00000398137 MT-ND6P03923 174 aa17.17■□□□□ 0.34
U2AF1-203ENST00000398137 GAGE6Q13070 117 aa17.17■□□□□ 0.34
U2AF1-203ENST00000398137 TMEM262E9PQX1 116 aa17.16■□□□□ 0.34
U2AF1-203ENST00000398137 VCYO14598 125 aa17.16■□□□□ 0.34
U2AF1-203ENST00000398137 SMIM2Q9BVW6 85 aa17.16■□□□□ 0.34
U2AF1-203ENST00000398137 MRPL18Q9H0U6 180 aaKnown RBP17.16■□□□□ 0.34
U2AF1-203ENST00000398137 DNAH5Q8TE73 4624 aa17.16■□□□□ 0.34
U2AF1-203ENST00000398137 A0A087WX48 190 aa17.15■□□□□ 0.34
U2AF1-203ENST00000398137 C10orf126Q8N4M7 172 aa17.15■□□□□ 0.34
U2AF1-203ENST00000398137 LAMTOR2Q9Y2Q5 125 aa17.15■□□□□ 0.34
U2AF1-203ENST00000398137 FCER1GP30273 86 aa17.14■□□□□ 0.33
U2AF1-203ENST00000398137 RPL32P62910 135 aaKnown RBP17.14■□□□□ 0.33
U2AF1-203ENST00000398137 MPV17L2Q567V2 206 aa17.14■□□□□ 0.33
U2AF1-203ENST00000398137 APOBP04114 4563 aaKnown RBP17.13■□□□□ 0.33
U2AF1-203ENST00000398137 K7EP13 123 aa17.13■□□□□ 0.33
U2AF1-203ENST00000398137 FABP9Q0Z7S8 132 aa17.13■□□□□ 0.33
U2AF1-203ENST00000398137 KIR2DL4Q99706 377 aa17.13■□□□□ 0.33
U2AF1-203ENST00000398137 CHCHD7Q9BUK0 85 aa17.13■□□□□ 0.33
U2AF1-203ENST00000398137 UBE2L6O14933 153 aa17.12■□□□□ 0.33
U2AF1-203ENST00000398137 PKIAP61925 76 aa17.12■□□□□ 0.33
U2AF1-203ENST00000398137 MAP1LC3AQ9H492 121 aa17.12■□□□□ 0.33
U2AF1-203ENST00000398137 TRAPPC1Q9Y5R8 145 aa17.12■□□□□ 0.33
U2AF1-203ENST00000398137 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.11■□□□□ 0.33
U2AF1-203ENST00000398137 LOC389332A0A1B0GUA5 103 aa17.11■□□□□ 0.33
U2AF1-203ENST00000398137 IGKV2-29A2NJV5 120 aaPredicted RBP17.11■□□□□ 0.33
U2AF1-203ENST00000398137 Q8N976 141 aa17.11■□□□□ 0.33
U2AF1-203ENST00000398137 SCO1O75880 301 aa17.1■□□□□ 0.33
U2AF1-203ENST00000398137 RBX1P62877 108 aa17.1■□□□□ 0.33
U2AF1-203ENST00000398137 ABCA13Q86UQ4 5058 aa17.1■□□□□ 0.33
U2AF1-203ENST00000398137 KRTAP4-5Q9BYR2 181 aa17.09■□□□□ 0.33
U2AF1-203ENST00000398137 KLK12Q9UKR0 248 aa17.09■□□□□ 0.33
U2AF1-203ENST00000398137 C16orf90A8MZG2 172 aa17.08■□□□□ 0.32
U2AF1-203ENST00000398137 IBA57-AS1B1ANH7 110 aa17.08■□□□□ 0.32
U2AF1-203ENST00000398137 ESDP10768 282 aa17.08■□□□□ 0.32
U2AF1-203ENST00000398137 Q6ZRN7 208 aaPredicted RBP17.08■□□□□ 0.32
U2AF1-203ENST00000398137 ALKBH7Q9BT30 221 aaPredicted RBP17.08■□□□□ 0.32
U2AF1-203ENST00000398137 TCAPO15273 167 aa17.07■□□□□ 0.32
U2AF1-203ENST00000398137 ATP6V1G1O75348 118 aa17.07■□□□□ 0.32
U2AF1-203ENST00000398137 Q9HAA7 133 aa17.07■□□□□ 0.32
U2AF1-203ENST00000398137 PRSS47A8MTI9 375 aa17.06■□□□□ 0.32
U2AF1-203ENST00000398137 ANGP03950 147 aaKnown RBP17.06■□□□□ 0.32
U2AF1-203ENST00000398137 LAGE3Q14657 143 aa17.05■□□□□ 0.32
U2AF1-203ENST00000398137 AMMECR1LQ6DCA0 310 aa17.05■□□□□ 0.32
U2AF1-203ENST00000398137 FGF6P10767 208 aa17.04■□□□□ 0.32
U2AF1-203ENST00000398137 BTF3P20290 206 aaKnown RBP17.04■□□□□ 0.32
U2AF1-203ENST00000398137 KRTAP10-2P60368 255 aa17.04■□□□□ 0.32
U2AF1-203ENST00000398137 SPATA12Q7Z6I5 190 aa17.04■□□□□ 0.32
U2AF1-203ENST00000398137 Q8N8P6 123 aa17.04■□□□□ 0.32
U2AF1-203ENST00000398137 IGLV4-60A0A075B6I1 120 aa17.03■□□□□ 0.32
U2AF1-203ENST00000398137 H7C423 109 aa17.03■□□□□ 0.32
U2AF1-203ENST00000398137 RAB5AP20339 215 aa17.03■□□□□ 0.32
U2AF1-203ENST00000398137 RNASEKQ6P5S7 137 aaKnown RBP17.03■□□□□ 0.32
U2AF1-203ENST00000398137 UBE2WQ96B02 151 aa17.03■□□□□ 0.32
U2AF1-203ENST00000398137 A0A1B0GUV1 79 aa17.02■□□□□ 0.32
U2AF1-203ENST00000398137 CLPSL2Q6UWE3 100 aa17.02■□□□□ 0.32
U2AF1-203ENST00000398137 C20orf203Q8NBC4 194 aa17.02■□□□□ 0.32
U2AF1-203ENST00000398137 NXT2Q9NPJ8 142 aaKnown RBP17.02■□□□□ 0.32
U2AF1-203ENST00000398137 IFI27P40305 119 aaPredicted RBP17.01■□□□□ 0.31
U2AF1-203ENST00000398137 COLCA2A8K830 154 aa17■□□□□ 0.31
U2AF1-203ENST00000398137 S100A1P23297 94 aa17■□□□□ 0.31
U2AF1-203ENST00000398137 NFE4Q86UQ8 179 aa17■□□□□ 0.31
U2AF1-203ENST00000398137 LINC00269Q8N2A0 174 aa17■□□□□ 0.31
U2AF1-203ENST00000398137 TRAV8-3A0A0A6YYJ7 113 aa16.99■□□□□ 0.31
U2AF1-203ENST00000398137 CDK2AP2O75956 126 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms