RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 LAMA5O15230 3695 aa6.81□□□□□ -1.32
UCA1-201ENST00000397381 TIRAPP58753 221 aa6.8□□□□□ -1.32
UCA1-201ENST00000397381 CEMP1Q6PRD7 247 aaPredicted RBP6.8□□□□□ -1.32
UCA1-201ENST00000397381 TMEM126AQ9H061 195 aa6.8□□□□□ -1.32
UCA1-201ENST00000397381 RIF1Q5UIP0 2472 aaKnown RBP6.8□□□□□ -1.32
UCA1-201ENST00000397381 PTPRQQ9UMZ3 2332 aa6.8□□□□□ -1.32
UCA1-201ENST00000397381 IGLV5-45A0A087WSX0 123 aa6.8□□□□□ -1.32
UCA1-201ENST00000397381 PSMB8P28062 276 aa6.8□□□□□ -1.32
UCA1-201ENST00000397381 NBL1P41271 181 aa6.8□□□□□ -1.32
UCA1-201ENST00000397381 UCNP55089 124 aa6.8□□□□□ -1.32
UCA1-201ENST00000397381 NPC2P61916 151 aa6.8□□□□□ -1.32
UCA1-201ENST00000397381 Q6ZSV7 163 aa6.8□□□□□ -1.32
UCA1-201ENST00000397381 DNAJC30Q96LL9 226 aa6.8□□□□□ -1.32
UCA1-201ENST00000397381 PIMREGQ9BSJ6 248 aa6.8□□□□□ -1.32
UCA1-201ENST00000397381 SPTBN1Q01082 2364 aaKnown RBP6.79□□□□□ -1.32
UCA1-201ENST00000397381 COX7A2LO14548 114 aa6.79□□□□□ -1.32
UCA1-201ENST00000397381 RNASE13Q5GAN3 156 aaKnown RBP6.79□□□□□ -1.32
UCA1-201ENST00000397381 CSMD1Q96PZ7 3565 aa6.79□□□□□ -1.32
UCA1-201ENST00000397381 IGHV3-73A0A0B4J1V6 119 aa6.79□□□□□ -1.32
UCA1-201ENST00000397381 SMIM20Q8N5G0 67 aa6.79□□□□□ -1.32
UCA1-201ENST00000397381 CITED2Q99967 270 aaPredicted RBP6.79□□□□□ -1.32
UCA1-201ENST00000397381 ABCA2Q9BZC7 2435 aa6.78□□□□□ -1.32
UCA1-201ENST00000397381 ZFHX2Q9C0A1 2572 aaPredicted RBP6.78□□□□□ -1.32
UCA1-201ENST00000397381 A8MZ25 164 aa6.78□□□□□ -1.32
UCA1-201ENST00000397381 PROK1P58294 105 aa6.78□□□□□ -1.32
UCA1-201ENST00000397381 LINC00308Q8TCZ7 52 aa6.78□□□□□ -1.32
UCA1-201ENST00000397381 PRORYQ9H606 182 aa6.78□□□□□ -1.32
UCA1-201ENST00000397381 SPTA1P02549 2419 aa6.78□□□□□ -1.32
UCA1-201ENST00000397381 PTPRZ1P23471 2315 aaPredicted RBP6.78□□□□□ -1.32
UCA1-201ENST00000397381 IGHV4-61A0A0C4DH41 118 aa6.78□□□□□ -1.32
UCA1-201ENST00000397381 ZNF415Q09FC8 603 aa6.78□□□□□ -1.32
UCA1-201ENST00000397381 LINC00643Q86TS7 51 aa6.78□□□□□ -1.32
UCA1-201ENST00000397381 LINC00467Q9BRT7 94 aa6.78□□□□□ -1.32
UCA1-201ENST00000397381 CHCHD5Q9BSY4 110 aa6.78□□□□□ -1.32
UCA1-201ENST00000397381 CDKN2A-AS1Q9UH64 79 aa6.78□□□□□ -1.32
UCA1-201ENST00000397381 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.77□□□□□ -1.33
UCA1-201ENST00000397381 IGLV5-39A0A0G2JS06 123 aa6.77□□□□□ -1.33
UCA1-201ENST00000397381 IGKV2-29A2NJV5 120 aaPredicted RBP6.77□□□□□ -1.33
UCA1-201ENST00000397381 A8MTW9 85 aa6.77□□□□□ -1.33
UCA1-201ENST00000397381 RBMY1A1P0DJD3 496 aaKnown RBP6.77□□□□□ -1.33
UCA1-201ENST00000397381 RBMY1CP0DJD4 496 aa6.77□□□□□ -1.33
UCA1-201ENST00000397381 RBMY1FQ15415 496 aaKnown RBP6.77□□□□□ -1.33
UCA1-201ENST00000397381 TRACP01848 142 aa6.76□□□□□ -1.33
UCA1-201ENST00000397381 HERV-K104P63124 156 aa6.76□□□□□ -1.33
UCA1-201ENST00000397381 SHISA2Q6UWI4 295 aa6.76□□□□□ -1.33
UCA1-201ENST00000397381 LINC01587Q99440 93 aa6.76□□□□□ -1.33
UCA1-201ENST00000397381 PPDPFQ9H3Y8 114 aa6.76□□□□□ -1.33
UCA1-201ENST00000397381 IGHV3-53P01767 116 aa6.76□□□□□ -1.33
UCA1-201ENST00000397381 ATP5G1P05496 136 aa6.76□□□□□ -1.33
UCA1-201ENST00000397381 HERVK_113P63121 156 aa6.76□□□□□ -1.33
UCA1-201ENST00000397381 LY6DQ14210 128 aa6.76□□□□□ -1.33
UCA1-201ENST00000397381 DAND5Q8N907 189 aa6.76□□□□□ -1.33
UCA1-201ENST00000397381 C10orf105Q8TEF2 133 aa6.76□□□□□ -1.33
UCA1-201ENST00000397381 SYNJ2BPP57105 145 aa6.75□□□□□ -1.33
UCA1-201ENST00000397381 TMEM95Q3KNT9 176 aa6.75□□□□□ -1.33
UCA1-201ENST00000397381 Q6ZSN1 163 aa6.75□□□□□ -1.33
UCA1-201ENST00000397381 FAM19A3Q7Z5A8 133 aa6.75□□□□□ -1.33
UCA1-201ENST00000397381 DUX5Q96PT3 197 aa6.75□□□□□ -1.33
UCA1-201ENST00000397381 CEP295Q9C0D2 2601 aa6.75□□□□□ -1.33
UCA1-201ENST00000397381 FAM236AA0A1B0GUQ0 79 aa6.75□□□□□ -1.33
UCA1-201ENST00000397381 FAM236BA0A1B0GV22 79 aa6.75□□□□□ -1.33
UCA1-201ENST00000397381 KNCNA6PVL3 124 aa6.75□□□□□ -1.33
UCA1-201ENST00000397381 DGAT2L7PQ6IED9 249 aa6.75□□□□□ -1.33
UCA1-201ENST00000397381 SDIM1Q6ZPB5 146 aa6.75□□□□□ -1.33
UCA1-201ENST00000397381 Q9H8V8 135 aa6.75□□□□□ -1.33
UCA1-201ENST00000397381 DOPEY2Q9Y3R5 2298 aa6.74□□□□□ -1.33
UCA1-201ENST00000397381 MSMBP08118 114 aa6.74□□□□□ -1.33
UCA1-201ENST00000397381 HTN1P15515 57 aa6.74□□□□□ -1.33
UCA1-201ENST00000397381 CXCL5P42830 114 aa6.74□□□□□ -1.33
UCA1-201ENST00000397381 FAM222AQ5U5X8 452 aa6.74□□□□□ -1.33
UCA1-201ENST00000397381 PEMTQ9UBM1 199 aa6.74□□□□□ -1.33
UCA1-201ENST00000397381 RS1O15537 224 aa6.74□□□□□ -1.33
UCA1-201ENST00000397381 BEAN1Q3B7T3 259 aa6.74□□□□□ -1.33
UCA1-201ENST00000397381 Q9UF83 564 aa6.74□□□□□ -1.33
UCA1-201ENST00000397381 NACAE9PAV3 2078 aa6.74□□□□□ -1.33
UCA1-201ENST00000397381 COL6A6A6NMZ7 2263 aa6.73□□□□□ -1.33
UCA1-201ENST00000397381 BAALC-AS2P0C853 105 aa6.73□□□□□ -1.33
UCA1-201ENST00000397381 INAFM2P0DMQ5 153 aa6.73□□□□□ -1.33
UCA1-201ENST00000397381 IGHV3OR16-12A0A075B7B8 117 aa6.73□□□□□ -1.33
UCA1-201ENST00000397381 COX6A2Q02221 97 aa6.73□□□□□ -1.33
UCA1-201ENST00000397381 DAZ2Q13117 558 aaKnown RBP6.73□□□□□ -1.33
UCA1-201ENST00000397381 LINC00242Q5T6M2 205 aa6.73□□□□□ -1.33
UCA1-201ENST00000397381 CFAP161Q6P656 301 aa6.73□□□□□ -1.33
UCA1-201ENST00000397381 DAZ4Q86SG3 579 aaKnown RBP6.73□□□□□ -1.33
UCA1-201ENST00000397381 C3orf22Q8N5N4 141 aa6.73□□□□□ -1.33
UCA1-201ENST00000397381 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.73□□□□□ -1.33
UCA1-201ENST00000397381 SMCR5Q8TEV8 140 aa6.73□□□□□ -1.33
UCA1-201ENST00000397381 DAZ3Q9NR90 486 aaKnown RBP6.73□□□□□ -1.33
UCA1-201ENST00000397381 IGHV3-38A0A0C4DH36 116 aa6.72□□□□□ -1.33
UCA1-201ENST00000397381 UQCRQO14949 82 aa6.72□□□□□ -1.33
UCA1-201ENST00000397381 HOXD3P31249 432 aaPredicted RBP6.72□□□□□ -1.33
UCA1-201ENST00000397381 DEFB131AP59861 70 aa6.72□□□□□ -1.33
UCA1-201ENST00000397381 C10orf99Q6UWK7 81 aa6.72□□□□□ -1.33
UCA1-201ENST00000397381 SPTAN1Q13813 2472 aaKnown RBP6.72□□□□□ -1.33
UCA1-201ENST00000397381 NBASA2RRP1 2371 aa6.72□□□□□ -1.33
UCA1-201ENST00000397381 SMIM1B2RUZ4 78 aa6.71□□□□□ -1.33
UCA1-201ENST00000397381 PF4P02776 101 aa6.71□□□□□ -1.33
UCA1-201ENST00000397381 C9orf153Q5TBE3 101 aa6.71□□□□□ -1.33
UCA1-201ENST00000397381 SOSTDC1Q6X4U4 206 aa6.71□□□□□ -1.33
UCA1-201ENST00000397381 C5orf38Q86SI9 138 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms