RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 M0R2P5 195 aa6.78□□□□□ -1.32
CAPN3-206ENST00000397163 RPL13AP40429 203 aaKnown RBP6.78□□□□□ -1.32
CAPN3-206ENST00000397163 BBC3Q96PG8 261 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-206ENST00000397163 CUBNO60494 3623 aa6.78□□□□□ -1.32
CAPN3-206ENST00000397163 IGLV4-3A0A075B6K6 122 aa6.78□□□□□ -1.32
CAPN3-206ENST00000397163 I3L3M4 83 aa6.78□□□□□ -1.32
CAPN3-206ENST00000397163 SPTAN1Q13813 2472 aaKnown RBP6.78□□□□□ -1.32
CAPN3-206ENST00000397163 PRRC2AP48634 2157 aaKnown RBP6.78□□□□□ -1.32
CAPN3-206ENST00000397163 C9orf85Q96MD7 179 aa6.78□□□□□ -1.32
CAPN3-206ENST00000397163 SMIM9A6NGZ8 99 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 NDUFA7O95182 113 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 IGHV3-30-3P0DP02 117 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 CD28P10747 220 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 BLCAPP62952 87 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 DUX5Q96PT3 197 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 TIMM21Q9BVV7 248 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 KMT2BQ9UMN6 2715 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-206ENST00000397163 A8MZ25 164 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 C5orf47Q569G3 176 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 ZNF843Q8N446 348 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 DAND5Q8N907 189 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 SMCR5Q8TEV8 140 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 TMEM101Q96IK0 257 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 ICOSQ9Y6W8 199 aa6.77□□□□□ -1.33
CAPN3-206ENST00000397163 A0A0J9YX75 114 aa6.76□□□□□ -1.33
CAPN3-206ENST00000397163 TRBV30A0A0K0K1B3 111 aa6.76□□□□□ -1.33
CAPN3-206ENST00000397163 H3BUA1 57 aa6.76□□□□□ -1.33
CAPN3-206ENST00000397163 PRB1P04280 392 aa6.76□□□□□ -1.33
CAPN3-206ENST00000397163 RNASE13Q5GAN3 156 aaKnown RBP6.76□□□□□ -1.33
CAPN3-206ENST00000397163 DCANP1Q8TF63 244 aa6.76□□□□□ -1.33
CAPN3-206ENST00000397163 DNAJC30Q96LL9 226 aa6.76□□□□□ -1.33
CAPN3-206ENST00000397163 CHD6Q8TD26 2715 aa6.76□□□□□ -1.33
CAPN3-206ENST00000397163 IGHV1OR15-1A0A075B7D0 117 aa6.76□□□□□ -1.33
CAPN3-206ENST00000397163 H3BUX3 64 aa6.76□□□□□ -1.33
CAPN3-206ENST00000397163 IGHG2P01859 326 aa6.76□□□□□ -1.33
CAPN3-206ENST00000397163 SPINK13Q1W4C9 94 aa6.76□□□□□ -1.33
CAPN3-206ENST00000397163 HRNRQ86YZ3 2850 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-206ENST00000397163 COX6CP09669 75 aa6.76□□□□□ -1.33
CAPN3-206ENST00000397163 CYSTM1Q9H1C7 97 aa6.76□□□□□ -1.33
CAPN3-206ENST00000397163 NDUFA12Q9UI09 145 aa6.75□□□□□ -1.33
CAPN3-206ENST00000397163 IGHV3-73A0A0B4J1V6 119 aa6.75□□□□□ -1.33
CAPN3-206ENST00000397163 HTN1P15515 57 aa6.75□□□□□ -1.33
CAPN3-206ENST00000397163 C3orf22Q8N5N4 141 aa6.75□□□□□ -1.33
CAPN3-206ENST00000397163 SNRPD3P62318 126 aaKnown RBP6.74□□□□□ -1.33
CAPN3-206ENST00000397163 ADAMTSL4-AS1Q5T5F5 129 aa6.74□□□□□ -1.33
CAPN3-206ENST00000397163 IGHV4-38-2P0DP08 117 aa6.74□□□□□ -1.33
CAPN3-206ENST00000397163 ZNF462Q96JM2 2506 aa6.74□□□□□ -1.33
CAPN3-206ENST00000397163 HIVEP3Q5T1R4 2406 aa6.74□□□□□ -1.33
CAPN3-206ENST00000397163 A0A0U1RRA0 63 aa6.74□□□□□ -1.33
CAPN3-206ENST00000397163 K7EMT4 169 aa6.74□□□□□ -1.33
CAPN3-206ENST00000397163 KIR2DL5BQ8NHK3 375 aa6.74□□□□□ -1.33
CAPN3-206ENST00000397163 LITAFQ99732 161 aa6.74□□□□□ -1.33
CAPN3-206ENST00000397163 NACAE9PAV3 2078 aa6.74□□□□□ -1.33
CAPN3-206ENST00000397163 IGHV1-58A0A0C4DH39 117 aa6.73□□□□□ -1.33
CAPN3-206ENST00000397163 TRBV7-7A0A0K0K1E9 115 aa6.73□□□□□ -1.33
CAPN3-206ENST00000397163 hADV29S1A0JD25 119 aa6.73□□□□□ -1.33
CAPN3-206ENST00000397163 GNLYP22749 145 aa6.73□□□□□ -1.33
CAPN3-206ENST00000397163 CFAP46Q8IYW2 2715 aa6.73□□□□□ -1.33
CAPN3-206ENST00000397163 A6NDX4 124 aa6.72□□□□□ -1.33
CAPN3-206ENST00000397163 H3BT86 120 aa6.72□□□□□ -1.33
CAPN3-206ENST00000397163 J3KT08 172 aa6.72□□□□□ -1.33
CAPN3-206ENST00000397163 MRPS36P82909 103 aaKnown RBP6.72□□□□□ -1.33
CAPN3-206ENST00000397163 SPANXA1Q9NS26 97 aa6.72□□□□□ -1.33
CAPN3-206ENST00000397163 SORL1Q92673 2214 aa6.72□□□□□ -1.33
CAPN3-206ENST00000397163 FASNP49327 2511 aaKnown RBP6.72□□□□□ -1.33
CAPN3-206ENST00000397163 IGLV1-40P01703 118 aa6.72□□□□□ -1.33
CAPN3-206ENST00000397163 MIAQ16674 131 aa6.72□□□□□ -1.33
CAPN3-206ENST00000397163 PROK1P58294 105 aa6.72□□□□□ -1.33
CAPN3-206ENST00000397163 LINC01600Q96MT4 127 aa6.72□□□□□ -1.33
CAPN3-206ENST00000397163 SPANXDQ9BXN6 97 aa6.72□□□□□ -1.33
CAPN3-206ENST00000397163 SPANXCQ9NY87 97 aa6.72□□□□□ -1.33
CAPN3-206ENST00000397163 PYGO1Q9Y3Y4 419 aa6.72□□□□□ -1.33
CAPN3-206ENST00000397163 COL12A1Q99715 3063 aa6.71□□□□□ -1.33
CAPN3-206ENST00000397163 MYO18BQ8IUG5 2567 aa6.71□□□□□ -1.33
CAPN3-206ENST00000397163 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.71□□□□□ -1.336e-8■■■■□ 22
CAPN3-206ENST00000397163 IGHV4-61A0A0C4DH41 118 aa6.71□□□□□ -1.34
CAPN3-206ENST00000397163 KNCNA6PVL3 124 aa6.71□□□□□ -1.34
CAPN3-206ENST00000397163 GAGE2AQ6NT46 116 aa6.71□□□□□ -1.34
CAPN3-206ENST00000397163 VSIG2Q96IQ7 327 aa6.71□□□□□ -1.34
CAPN3-206ENST00000397163 TRAV13-1A0A0B4J241 112 aa6.71□□□□□ -1.34
CAPN3-206ENST00000397163 UQCRQO14949 82 aa6.71□□□□□ -1.34
CAPN3-206ENST00000397163 CREBBPQ92793 2442 aa6.7□□□□□ -1.34
CAPN3-206ENST00000397163 K7EQG2 157 aa6.7□□□□□ -1.34
CAPN3-206ENST00000397163 TMEM61Q8N0U2 210 aa6.7□□□□□ -1.34
CAPN3-206ENST00000397163 DSCR8Q96T75 97 aa6.7□□□□□ -1.34
CAPN3-206ENST00000397163 LST1O00453 97 aa6.7□□□□□ -1.34
CAPN3-206ENST00000397163 FAM104AQ969W3 186 aa6.7□□□□□ -1.34
CAPN3-206ENST00000397163 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-206ENST00000397163 IGKV2-29A2NJV5 120 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-206ENST00000397163 C4orf26Q17RF5 130 aa6.69□□□□□ -1.34
CAPN3-206ENST00000397163 TINCRA0A1B0GVN0 87 aa6.69□□□□□ -1.34
CAPN3-206ENST00000397163 LINC00526Q96FQ7 95 aa6.69□□□□□ -1.34
CAPN3-206ENST00000397163 ZNF625Q96I27 306 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-206ENST00000397163 CSMD2Q7Z408 3487 aa6.69□□□□□ -1.34
CAPN3-206ENST00000397163 SYNJ2BPP57105 145 aa6.69□□□□□ -1.34
CAPN3-206ENST00000397163 C10orf99Q6UWK7 81 aa6.69□□□□□ -1.34
CAPN3-206ENST00000397163 PIMREGQ9BSJ6 248 aa6.69□□□□□ -1.34
CAPN3-206ENST00000397163 Q9UF83 564 aa6.69□□□□□ -1.34
CAPN3-206ENST00000397163 FAM240AA0A1B0GVK7 77 aa6.68□□□□□ -1.34
CAPN3-206ENST00000397163 CFHR3Q02985 330 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms