RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SRIP30626 198 aa9.4□□□□□ -0.9
SEC13-205ENST00000397101 DNAJC30Q96LL9 226 aa9.4□□□□□ -0.9
SEC13-205ENST00000397101 Q9H8V8 135 aa9.4□□□□□ -0.9
SEC13-205ENST00000397101 LOC389332A0A1B0GUA5 103 aa9.39□□□□□ -0.91
SEC13-205ENST00000397101 TNFRSF6BO95407 300 aa9.39□□□□□ -0.91
SEC13-205ENST00000397101 NEXN-AS1Q8NBZ9 246 aa9.39□□□□□ -0.91
SEC13-205ENST00000397101 MAP1LC3AQ9H492 121 aa9.39□□□□□ -0.91
SEC13-205ENST00000397101 ICOSQ9Y6W8 199 aa9.39□□□□□ -0.91
SEC13-205ENST00000397101 C1orf196B1AJZ1 125 aa9.38□□□□□ -0.91
SEC13-205ENST00000397101 NPYP01303 97 aa9.38□□□□□ -0.91
SEC13-205ENST00000397101 VSIG2Q96IQ7 327 aa9.38□□□□□ -0.91
SEC13-205ENST00000397101 ALKBH7Q9BT30 221 aaPredicted RBP9.38□□□□□ -0.91
SEC13-205ENST00000397101 UPK3BQ9BT76 320 aa9.38□□□□□ -0.91
SEC13-205ENST00000397101 LAMTOR2Q9Y2Q5 125 aa9.38□□□□□ -0.91
SEC13-205ENST00000397101 TRBV7-3A0A075B6L6 115 aa9.37□□□□□ -0.91
SEC13-205ENST00000397101 A0A096LPF7 62 aa9.37□□□□□ -0.91
SEC13-205ENST00000397101 PMCHP20382 165 aa9.37□□□□□ -0.91
SEC13-205ENST00000397101 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
SEC13-205ENST00000397101 NRACQ8N912 160 aa9.37□□□□□ -0.91
SEC13-205ENST00000397101 IGHV3-38A0A0C4DH36 116 aa9.36□□□□□ -0.91
SEC13-205ENST00000397101 PHOX2AO14813 284 aa9.36□□□□□ -0.91
SEC13-205ENST00000397101 SUMO2P61956 95 aaKnown RBP9.36□□□□□ -0.91
SEC13-205ENST00000397101 PRSS3P2Q8NHM4 247 aa9.36□□□□□ -0.91
SEC13-205ENST00000397101 C20orf78Q9BR46 151 aa9.36□□□□□ -0.91
SEC13-205ENST00000397101 KRTAP1-5Q9BYS1 174 aa9.36□□□□□ -0.91
SEC13-205ENST00000397101 PGPEP1Q9NXJ5 209 aa9.36□□□□□ -0.91
SEC13-205ENST00000397101 Q9UF83 564 aa9.36□□□□□ -0.91
SEC13-205ENST00000397101 DNAH8Q96JB1 4490 aa9.36□□□□□ -0.91
SEC13-205ENST00000397101 TRBV6-5A0A0K0K1A5 114 aa9.35□□□□□ -0.91
SEC13-205ENST00000397101 SDHAF1A6NFY7 115 aa9.35□□□□□ -0.91
SEC13-205ENST00000397101 VCYO14598 125 aa9.35□□□□□ -0.91
SEC13-205ENST00000397101 IQCJQ1A5X6 159 aa9.35□□□□□ -0.91
SEC13-205ENST00000397101 ATP6V0E2Q8NHE4 81 aa9.35□□□□□ -0.91
SEC13-205ENST00000397101 DEFB104AQ8WTQ1 72 aa9.35□□□□□ -0.91
SEC13-205ENST00000397101 H3BNG1 76 aa9.34□□□□□ -0.91
SEC13-205ENST00000397101 XGP55808 180 aa9.34□□□□□ -0.91
SEC13-205ENST00000397101 RAB5BP61020 215 aa9.34□□□□□ -0.91
SEC13-205ENST00000397101 CDPF1Q6NVV7 123 aa9.34□□□□□ -0.91
SEC13-205ENST00000397101 NEGR1Q7Z3B1 354 aa9.34□□□□□ -0.91
SEC13-205ENST00000397101 SH2D6Q7Z4S9 175 aa9.34□□□□□ -0.91
SEC13-205ENST00000397101 BAGE3Q86Y29 109 aa9.34□□□□□ -0.91
SEC13-205ENST00000397101 I3L3M4 83 aa9.33□□□□□ -0.92
SEC13-205ENST00000397101 FCER1GP30273 86 aa9.33□□□□□ -0.92
SEC13-205ENST00000397101 UBE2D3P61077 147 aa9.33□□□□□ -0.92
SEC13-205ENST00000397101 UBE2D2P62837 147 aa9.33□□□□□ -0.92
SEC13-205ENST00000397101 Q5VSD8 79 aa9.33□□□□□ -0.92
SEC13-205ENST00000397101 FA2HQ7L5A8 372 aa9.33□□□□□ -0.92
SEC13-205ENST00000397101 DAZ4Q86SG3 579 aaKnown RBP9.33□□□□□ -0.92
SEC13-205ENST00000397101 KIR2DL4Q99706 377 aa9.33□□□□□ -0.92
SEC13-205ENST00000397101 TMEM70Q9BUB7 260 aa9.33□□□□□ -0.92
SEC13-205ENST00000397101 SMIM2Q9BVW6 85 aa9.33□□□□□ -0.92
SEC13-205ENST00000397101 DAZ3Q9NR90 486 aaKnown RBP9.33□□□□□ -0.92
SEC13-205ENST00000397101 IFI27P40305 119 aaPredicted RBP9.32□□□□□ -0.92
SEC13-205ENST00000397101 COTL1Q14019 142 aa9.32□□□□□ -0.92
SEC13-205ENST00000397101 C18orf32Q8TCD1 76 aa9.32□□□□□ -0.92
SEC13-205ENST00000397101 NXT2Q9NPJ8 142 aaKnown RBP9.32□□□□□ -0.92
SEC13-205ENST00000397101 POLR2KP53803 58 aaKnown RBP9.31□□□□□ -0.92
SEC13-205ENST00000397101 RNASEKQ6P5S7 137 aaKnown RBP9.31□□□□□ -0.92
SEC13-205ENST00000397101 Q6ZRN7 208 aaPredicted RBP9.31□□□□□ -0.92
SEC13-205ENST00000397101 Q8N8P6 123 aa9.31□□□□□ -0.92
SEC13-205ENST00000397101 MRPS16Q9Y3D3 137 aaKnown RBP9.31□□□□□ -0.92
SEC13-205ENST00000397101 HMCN2Q8NDA2 5059 aa9.31□□□□□ -0.92
SEC13-205ENST00000397101 TCAPO15273 167 aa9.3□□□□□ -0.92
SEC13-205ENST00000397101 NDUFA6P56556 154 aa9.3□□□□□ -0.92
SEC13-205ENST00000397101 TMEM97Q5BJF2 176 aa9.3□□□□□ -0.92
SEC13-205ENST00000397101 NIT1Q86X76 327 aa9.3□□□□□ -0.92
SEC13-205ENST00000397101 GTSF1LQ9H1H1 148 aa9.3□□□□□ -0.92
SEC13-205ENST00000397101 TRBV27A0A0K0K1C4 114 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 PRSS47A8MTI9 375 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 EREGO14944 169 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 HIST1H2BKO60814 126 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 HIST1H2BJP06899 126 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 HIST1H2BOP23527 126 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 HIST1H2BBP33778 126 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 AMTP48728 403 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 HIST1H2BDP58876 126 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 HIST1H2BCP62807 126 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 RPL32P62910 135 aaKnown RBP9.29□□□□□ -0.92
SEC13-205ENST00000397101 Q0VG73 95 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 HIST2H2BEQ16778 126 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 ESRGQ1W209 222 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.29□□□□□ -0.92
SEC13-205ENST00000397101 HIST1H2BHQ93079 126 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 HIST1H2BNQ99877 126 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 HIST1H2BMQ99879 126 aa9.29□□□□□ -0.92
SEC13-205ENST00000397101 LINC00614P0C842 121 aa9.28□□□□□ -0.92
SEC13-205ENST00000397101 LINC00694P0DN24 101 aa9.28□□□□□ -0.92
SEC13-205ENST00000397101 LYPD5Q6UWN5 251 aa9.28□□□□□ -0.92
SEC13-205ENST00000397101 SRRM2Q9UQ35 2752 aaKnown RBP9.27□□□□□ -0.93
SEC13-205ENST00000397101 TRBV25-1A0A075B6N4 114 aa9.27□□□□□ -0.93
SEC13-205ENST00000397101 IGHV1-24A0A0C4DH33 117 aa9.27□□□□□ -0.93
SEC13-205ENST00000397101 UBE2L6O14933 153 aa9.27□□□□□ -0.93
SEC13-205ENST00000397101 TSHBP01222 138 aa9.27□□□□□ -0.93
SEC13-205ENST00000397101 S100A6P06703 90 aa9.27□□□□□ -0.93
SEC13-205ENST00000397101 LAGE3Q14657 143 aa9.27□□□□□ -0.93
SEC13-205ENST00000397101 ORMDL2Q53FV1 153 aa9.27□□□□□ -0.93
SEC13-205ENST00000397101 AP5S1Q9NUS5 200 aa9.27□□□□□ -0.93
SEC13-205ENST00000397101 TMA7Q9Y2S6 64 aaKnown RBP9.27□□□□□ -0.93
SEC13-205ENST00000397101 FLG2Q5D862 2391 aaPredicted RBP9.27□□□□□ -0.93
SEC13-205ENST00000397101 TRBV6-8A0A0A6YYG3 113 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms