RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 P0DMU3 169 aa5.44□□□□□ -1.54
UPF2-203ENST00000397053 FAM231AP0DMU4 169 aa5.44□□□□□ -1.54
UPF2-203ENST00000397053 FAM231CP0DMU5 169 aa5.44□□□□□ -1.54
UPF2-203ENST00000397053 CLEC2BQ92478 149 aa5.44□□□□□ -1.54
UPF2-203ENST00000397053 SERP1Q9Y6X1 66 aa5.44□□□□□ -1.54
UPF2-203ENST00000397053 TTTY13Q9BZ97 58 aa5.44□□□□□ -1.54
UPF2-203ENST00000397053 PTPRDP23468 1912 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 E9PLD3 99 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 MIAQ16674 131 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 TEN1Q86WV5 123 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 C1orf158Q8N1D5 194 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 COL5A3P25940 1745 aaPredicted RBP5.43□□□□□ -1.54
UPF2-203ENST00000397053 NUPR2A6NF83 97 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 H3BT86 120 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 K7EQG2 157 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 KPRPQ5T749 579 aaPredicted RBP5.43□□□□□ -1.54
UPF2-203ENST00000397053 WFDC10BQ8IUB3 73 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 TOMM6Q96B49 74 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 PRR15LQ9BU68 103 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 BRWD3Q6RI45 1802 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 TCL1BO95988 128 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 Q8N976 141 aa5.43□□□□□ -1.54
UPF2-203ENST00000397053 TAX1BP3O14907 124 aa5.42□□□□□ -1.54
UPF2-203ENST00000397053 NDUFS6O75380 124 aaKnown RBP5.42□□□□□ -1.54
UPF2-203ENST00000397053 HRCT1Q6UXD1 115 aa5.42□□□□□ -1.54
UPF2-203ENST00000397053 HIST2H2BDQ6DRA6 164 aa5.42□□□□□ -1.54
UPF2-203ENST00000397053 NRXN2Q9P2S2 1712 aa5.42□□□□□ -1.54
UPF2-203ENST00000397053 LCTP09848 1927 aa5.42□□□□□ -1.54
UPF2-203ENST00000397053 IGKV2-28A0A075B6P5 120 aa5.42□□□□□ -1.54
UPF2-203ENST00000397053 IGKV2D-28P01615 120 aa5.42□□□□□ -1.54
UPF2-203ENST00000397053 CTRLP40313 264 aa5.42□□□□□ -1.54
UPF2-203ENST00000397053 A0A0G2JMZ2 1700 aa5.42□□□□□ -1.54
UPF2-203ENST00000397053 LRRC37A2A6NM11 1700 aa5.42□□□□□ -1.54
UPF2-203ENST00000397053 Q8N9L7 120 aa5.42□□□□□ -1.54
UPF2-203ENST00000397053 COL4A6Q14031 1691 aa5.42□□□□□ -1.54
UPF2-203ENST00000397053 NCOA6Q14686 2063 aaPredicted RBP5.41□□□□□ -1.54
UPF2-203ENST00000397053 OXLD1Q5BKU9 147 aa5.41□□□□□ -1.54
UPF2-203ENST00000397053 LINC01006Q8NI28 216 aa5.41□□□□□ -1.54
UPF2-203ENST00000397053 FAM167A-AS1Q96KT0 104 aa5.41□□□□□ -1.54
UPF2-203ENST00000397053 GBF1Q92538 1859 aa5.41□□□□□ -1.54
UPF2-203ENST00000397053 LINC00173Q6ZV60 143 aa5.41□□□□□ -1.54
UPF2-203ENST00000397053 CCDC140Q96MF4 163 aa5.41□□□□□ -1.54
UPF2-203ENST00000397053 BBC3Q96PG8 261 aaPredicted RBP5.41□□□□□ -1.54
UPF2-203ENST00000397053 SIPA1L3O60292 1781 aaPredicted RBP5.41□□□□□ -1.54
UPF2-203ENST00000397053 SBF1O95248 1867 aa5.41□□□□□ -1.54
UPF2-203ENST00000397053 TRAV23DV6A0A075B6W5 121 aa5.41□□□□□ -1.54
UPF2-203ENST00000397053 TRBV6-8A0A0A6YYG3 113 aa5.41□□□□□ -1.54
UPF2-203ENST00000397053 A0A0J9YWU9 116 aa5.41□□□□□ -1.54
UPF2-203ENST00000397053 RETNQ9HD89 108 aa5.41□□□□□ -1.54
UPF2-203ENST00000397053 NYNRINQ9P2P1 1898 aaKnown RBP5.41□□□□□ -1.54
UPF2-203ENST00000397053 CCKP06307 115 aa5.41□□□□□ -1.54
UPF2-203ENST00000397053 A0A1W2PNU3 283 aaPredicted RBP5.4□□□□□ -1.54
UPF2-203ENST00000397053 ODF3BA8MYP8 253 aa5.4□□□□□ -1.54
UPF2-203ENST00000397053 FXYD2P54710 66 aa5.4□□□□□ -1.54
UPF2-203ENST00000397053 SCXQ7RTU7 201 aa5.4□□□□□ -1.54
UPF2-203ENST00000397053 CDKN2A-AS1Q9UH64 79 aa5.4□□□□□ -1.54
UPF2-203ENST00000397053 LINC00474Q9P2X8 69 aa5.4□□□□□ -1.54
UPF2-203ENST00000397053 TP53TG3Q9ULZ0 132 aa5.4□□□□□ -1.54
UPF2-203ENST00000397053 IGLV9-49A0A0B4J1Y8 123 aa5.4□□□□□ -1.55
UPF2-203ENST00000397053 ODF3Q96PU9 254 aa5.4□□□□□ -1.55
UPF2-203ENST00000397053 SPTBN4Q9H254 2564 aa5.4□□□□□ -1.55
UPF2-203ENST00000397053 TICRRQ7Z2Z1 1910 aa5.4□□□□□ -1.55
UPF2-203ENST00000397053 TRBV6-4A0A1B0GX49 114 aa5.4□□□□□ -1.55
UPF2-203ENST00000397053 E7EUB6 86 aa5.4□□□□□ -1.55
UPF2-203ENST00000397053 H7C423 109 aa5.4□□□□□ -1.55
UPF2-203ENST00000397053 RBX1P62877 108 aa5.4□□□□□ -1.55
UPF2-203ENST00000397053 SPATA12Q7Z6I5 190 aa5.4□□□□□ -1.55
UPF2-203ENST00000397053 WISP2O76076 250 aa5.39□□□□□ -1.55
UPF2-203ENST00000397053 IGLV4-69A0A075B6H9 119 aa5.39□□□□□ -1.55
UPF2-203ENST00000397053 IBA57-AS1B1ANH7 110 aa5.39□□□□□ -1.55
UPF2-203ENST00000397053 LINC00467Q9BRT7 94 aa5.39□□□□□ -1.55
UPF2-203ENST00000397053 KIAA1671Q9BY89 1806 aa5.39□□□□□ -1.55
UPF2-203ENST00000397053 RALGAPA2Q2PPJ7 1873 aa5.39□□□□□ -1.55
UPF2-203ENST00000397053 LOC107984640A0A0U1RRK4 108 aa5.39□□□□□ -1.55
UPF2-203ENST00000397053 MSMPQ1L6U9 139 aa5.39□□□□□ -1.55
UPF2-203ENST00000397053 C6orf99Q4VX62 202 aa5.39□□□□□ -1.55
UPF2-203ENST00000397053 MYLKQ15746 1914 aa5.39□□□□□ -1.55
UPF2-203ENST00000397053 WFDC13Q8IUB5 93 aa5.39□□□□□ -1.55
UPF2-203ENST00000397053 SPRY4Q9C004 299 aa5.39□□□□□ -1.55
UPF2-203ENST00000397053 C19orf71A6NCJ1 209 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 PRYO14603 147 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 DCANP1Q8TF63 244 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 SPANXB1Q9NS25 103 aaPredicted RBP5.38□□□□□ -1.55
UPF2-203ENST00000397053 PLAC8L1A1L4L8 177 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 C20orf197Q8N268 126 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 LINC00526Q96FQ7 95 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 HIGD1BQ9P298 99 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 C3orf84H3BNL1 204 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 PLA2G2EQ9NZK7 142 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 WFDC2Q14508 124 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 LINC00643Q86TS7 51 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 NCKAP5O14513 1909 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 WDR81Q562E7 1941 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 FAM236DA0A1B0GTK5 79 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 FAM236CP0DP71 79 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 NANOS2P60321 138 aaKnown RBP5.38□□□□□ -1.55
UPF2-203ENST00000397053 Q6ZVQ6 151 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
UPF2-203ENST00000397053 RBBP6Q7Z6E9 1792 aaKnown RBP5.37□□□□□ -1.55
UPF2-203ENST00000397053 LELP1Q5T871 98 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms