RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 PROK1P58294 105 aa13.08□□□□□ -0.32
MCF2L-208ENST00000397030 LINC01545Q5VT33 79 aa13.08□□□□□ -0.32
MCF2L-208ENST00000397030 PLAC8L1A1L4L8 177 aa13.08□□□□□ -0.32
MCF2L-208ENST00000397030 IGLV2-8P01709 118 aa13.08□□□□□ -0.32
MCF2L-208ENST00000397030 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
MCF2L-208ENST00000397030 SPANXDQ9BXN6 97 aa13.07□□□□□ -0.32
MCF2L-208ENST00000397030 LINC00322Q6ZN03 302 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-208ENST00000397030 KIR2DL5BA0A0G2JN68 375 aa13.06□□□□□ -0.32
MCF2L-208ENST00000397030 KIR2DL5BA0A0G2JPC4 375 aa13.06□□□□□ -0.32
MCF2L-208ENST00000397030 KIR2DL5AQ8N109 375 aa13.06□□□□□ -0.32
MCF2L-208ENST00000397030 C20orf203Q8NBC4 194 aa13.06□□□□□ -0.32
MCF2L-208ENST00000397030 FAM167A-AS1Q96KT0 104 aa13.06□□□□□ -0.32
MCF2L-208ENST00000397030 SPRY4Q9C004 299 aa13.06□□□□□ -0.32
MCF2L-208ENST00000397030 FAM236AA0A1B0GUQ0 79 aa13.06□□□□□ -0.32
MCF2L-208ENST00000397030 FAM236BA0A1B0GV22 79 aa13.06□□□□□ -0.32
MCF2L-208ENST00000397030 Q8N976 141 aa13.06□□□□□ -0.32
MCF2L-208ENST00000397030 ZNF702PQ9H963 129 aa13.06□□□□□ -0.32
MCF2L-208ENST00000397030 C1orf158Q8N1D5 194 aa13.06□□□□□ -0.32
MCF2L-208ENST00000397030 NEXN-AS1Q8NBZ9 246 aa13.06□□□□□ -0.32
MCF2L-208ENST00000397030 ZNF706Q9Y5V0 76 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-208ENST00000397030 LOC100131303A0A0U1RQF7 123 aa13.05□□□□□ -0.32
MCF2L-208ENST00000397030 GPR179Q6PRD1 2367 aa13.05□□□□□ -0.32
MCF2L-208ENST00000397030 K7ERS5 55 aa13.05□□□□□ -0.32
MCF2L-208ENST00000397030 IGLV2-11P01706 119 aa13.05□□□□□ -0.32
MCF2L-208ENST00000397030 NOTCH4Q99466 2003 aa13.05□□□□□ -0.32
MCF2L-208ENST00000397030 IGLV5-52A0A0A0MRZ9 124 aa13.04□□□□□ -0.32
MCF2L-208ENST00000397030 C22orf34Q6ZV56 151 aa13.04□□□□□ -0.32
MCF2L-208ENST00000397030 COL4A3Q01955 1670 aa13.04□□□□□ -0.32
MCF2L-208ENST00000397030 CRYGBP07316 175 aa13.04□□□□□ -0.32
MCF2L-208ENST00000397030 C3orf22Q8N5N4 141 aa13.04□□□□□ -0.32
MCF2L-208ENST00000397030 CDPF1Q6NVV7 123 aa13.04□□□□□ -0.32
MCF2L-208ENST00000397030 SPTSSBQ8NFR3 76 aa13.04□□□□□ -0.32
MCF2L-208ENST00000397030 TRAV23DV6A0A075B6W5 121 aa13.04□□□□□ -0.32
MCF2L-208ENST00000397030 C3orf84H3BNL1 204 aa13.04□□□□□ -0.32
MCF2L-208ENST00000397030 ODF1Q14990 250 aa13.04□□□□□ -0.32
MCF2L-208ENST00000397030 SS18L2Q9UHA2 77 aa13.03□□□□□ -0.32
MCF2L-208ENST00000397030 TRBV6-8A0A0A6YYG3 113 aa13.03□□□□□ -0.32
MCF2L-208ENST00000397030 MLST8Q9BVC4 326 aa13.03□□□□□ -0.32
MCF2L-208ENST00000397030 ZNF80P51504 273 aaPredicted RBP13.03□□□□□ -0.32
MCF2L-208ENST00000397030 CFAP126Q5VTH2 177 aa13.03□□□□□ -0.32
MCF2L-208ENST00000397030 MALRD1Q5VYJ5 2156 aa13.03□□□□□ -0.32
MCF2L-208ENST00000397030 K7EQG2 157 aa13.02□□□□□ -0.32
MCF2L-208ENST00000397030 RETNLBQ9BQ08 111 aa13.02□□□□□ -0.32
MCF2L-208ENST00000397030 FAM236DA0A1B0GTK5 79 aa13.02□□□□□ -0.33
MCF2L-208ENST00000397030 FAM236CP0DP71 79 aa13.02□□□□□ -0.33
MCF2L-208ENST00000397030 MED13Q9UHV7 2174 aa13.01□□□□□ -0.33
MCF2L-208ENST00000397030 PCNX1Q96RV3 2341 aa13.01□□□□□ -0.33
MCF2L-208ENST00000397030 PRM2P04554 102 aa13.01□□□□□ -0.33
MCF2L-208ENST00000397030 BRI3O95415 125 aa13.01□□□□□ -0.33
MCF2L-208ENST00000397030 FSHBP01225 129 aa13.01□□□□□ -0.33
MCF2L-208ENST00000397030 CIRBP-AS1Q8TBR5 109 aa13.01□□□□□ -0.33
MCF2L-208ENST00000397030 E9PLD3 99 aa13.01□□□□□ -0.33
MCF2L-208ENST00000397030 CTRLP40313 264 aa13.01□□□□□ -0.33
MCF2L-208ENST00000397030 FXYD2P54710 66 aa13.01□□□□□ -0.33
MCF2L-208ENST00000397030 NOTCH3Q9UM47 2321 aa13□□□□□ -0.33
MCF2L-208ENST00000397030 IGLV2-14P01704 120 aa12.99□□□□□ -0.33
MCF2L-208ENST00000397030 LOC107984640A0A0U1RRK4 108 aa12.99□□□□□ -0.33
MCF2L-208ENST00000397030 MIAQ16674 131 aa12.99□□□□□ -0.33
MCF2L-208ENST00000397030 B5MCH6 92 aa12.99□□□□□ -0.33
MCF2L-208ENST00000397030 PIK3CD-AS1Q5SR53 167 aa12.99□□□□□ -0.33
MCF2L-208ENST00000397030 NBASA2RRP1 2371 aa12.98□□□□□ -0.33
MCF2L-208ENST00000397030 ATOX1O00244 68 aa12.98□□□□□ -0.33
MCF2L-208ENST00000397030 DENND4CQ5VZ89 1909 aa12.97□□□□□ -0.33
MCF2L-208ENST00000397030 X6R8D5 127 aa12.97□□□□□ -0.33
MCF2L-208ENST00000397030 MPLKIPQ8TAP9 179 aa12.96□□□□□ -0.33
MCF2L-208ENST00000397030 Q6ZS46 218 aa12.96□□□□□ -0.33
MCF2L-208ENST00000397030 SPTAN1Q13813 2472 aaKnown RBP12.96□□□□□ -0.33
MCF2L-208ENST00000397030 NUPR1O60356 82 aa12.96□□□□□ -0.34
MCF2L-208ENST00000397030 KRTAP10-9P60411 292 aa12.96□□□□□ -0.34
MCF2L-208ENST00000397030 WFDC13Q8IUB5 93 aa12.96□□□□□ -0.34
MCF2L-208ENST00000397030 C2orf16Q68DN1 1984 aa12.95□□□□□ -0.34
MCF2L-208ENST00000397030 A0A0J9YXY3 114 aa12.95□□□□□ -0.34
MCF2L-208ENST00000397030 H7C423 109 aa12.95□□□□□ -0.34
MCF2L-208ENST00000397030 CDKN2A-AS1Q9UH64 79 aa12.95□□□□□ -0.34
MCF2L-208ENST00000397030 SPATA12Q7Z6I5 190 aa12.95□□□□□ -0.34
MCF2L-208ENST00000397030 PSMG3-AS1Q96PY0 264 aa12.95□□□□□ -0.34
MCF2L-208ENST00000397030 C11orf71Q6IPW1 123 aa12.95□□□□□ -0.34
MCF2L-208ENST00000397030 U3KQK5 164 aa12.95□□□□□ -0.34
MCF2L-208ENST00000397030 ZNF106Q9H2Y7 1883 aaKnown RBP12.94□□□□□ -0.34
MCF2L-208ENST00000397030 SPANXCQ9NY87 97 aa12.94□□□□□ -0.34
MCF2L-208ENST00000397030 ZFHX2Q9C0A1 2572 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-208ENST00000397030 LYPD6Q86Y78 171 aa12.94□□□□□ -0.34
MCF2L-208ENST00000397030 ODF3Q96PU9 254 aa12.93□□□□□ -0.34
MCF2L-208ENST00000397030 IGLV4-69A0A075B6H9 119 aa12.93□□□□□ -0.34
MCF2L-208ENST00000397030 NDUFC2O95298 119 aa12.93□□□□□ -0.34
MCF2L-208ENST00000397030 CREBBPQ92793 2442 aa12.93□□□□□ -0.34
MCF2L-208ENST00000397030 TRBV6-4A0A1B0GX49 114 aa12.91□□□□□ -0.34
MCF2L-208ENST00000397030 TNRC6AQ8NDV7 1962 aaKnown RBP12.91□□□□□ -0.34
MCF2L-208ENST00000397030 PDE6GP18545 87 aa12.91□□□□□ -0.34
MCF2L-208ENST00000397030 WFDC2Q14508 124 aa12.91□□□□□ -0.34
MCF2L-208ENST00000397030 CCKP06307 115 aa12.91□□□□□ -0.34
MCF2L-208ENST00000397030 Q6ZVQ6 151 aa12.91□□□□□ -0.34
MCF2L-208ENST00000397030 RBX1P62877 108 aa12.91□□□□□ -0.34
MCF2L-208ENST00000397030 LELP1Q5T871 98 aa12.91□□□□□ -0.34
MCF2L-208ENST00000397030 SDIM1Q6ZPB5 146 aa12.91□□□□□ -0.34
MCF2L-208ENST00000397030 LINC00474Q9P2X8 69 aa12.91□□□□□ -0.34
MCF2L-208ENST00000397030 FRMD6-AS1P0C7T7 363 aa12.9□□□□□ -0.34
MCF2L-208ENST00000397030 SPANXB1Q9NS25 103 aaPredicted RBP12.9□□□□□ -0.34
MCF2L-208ENST00000397030 PTPRQQ9UMZ3 2332 aa12.9□□□□□ -0.34
MCF2L-208ENST00000397030 ENHOQ6UWT2 76 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms