RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 DCANP1Q8TF63 244 aa6.87□□□□□ -1.31
NDE1-201ENST00000396354 SPINK8P0C7L1 97 aa6.86□□□□□ -1.31
NDE1-201ENST00000396354 MRPL53Q96EL3 112 aaKnown RBP6.86□□□□□ -1.31
NDE1-201ENST00000396354 USMG5Q96IX5 58 aa6.86□□□□□ -1.31
NDE1-201ENST00000396354 TRAV12-1A0A0B4J245 112 aa6.86□□□□□ -1.31
NDE1-201ENST00000396354 MT-ATP8P03928 68 aa6.86□□□□□ -1.31
NDE1-201ENST00000396354 HOXD3P31249 432 aaPredicted RBP6.86□□□□□ -1.31
NDE1-201ENST00000396354 LINC00315P59091 139 aa6.86□□□□□ -1.31
NDE1-201ENST00000396354 KRTAP1-3Q8IUG1 177 aa6.86□□□□□ -1.31
NDE1-201ENST00000396354 XCL2Q9UBD3 114 aa6.86□□□□□ -1.31
NDE1-201ENST00000396354 TCTEX1D4Q5JR98 221 aa6.86□□□□□ -1.31
NDE1-201ENST00000396354 IGHV4-4A0A075B6R2 117 aa6.85□□□□□ -1.31
NDE1-201ENST00000396354 IGHV1OR15-1A0A075B7D0 117 aa6.85□□□□□ -1.31
NDE1-201ENST00000396354 CFC1BP0CG36 223 aa6.85□□□□□ -1.31
NDE1-201ENST00000396354 CFC1P0CG37 223 aa6.85□□□□□ -1.31
NDE1-201ENST00000396354 PSMB8P28062 276 aa6.85□□□□□ -1.31
NDE1-201ENST00000396354 NDUFA11Q86Y39 141 aa6.85□□□□□ -1.31
NDE1-201ENST00000396354 MUSTN1Q8IVN3 82 aa6.85□□□□□ -1.31
NDE1-201ENST00000396354 LINC01356Q8N9X3 169 aa6.85□□□□□ -1.31
NDE1-201ENST00000396354 IGIPA6NJ69 53 aa6.85□□□□□ -1.31
NDE1-201ENST00000396354 ELANEP08246 267 aa6.85□□□□□ -1.31
NDE1-201ENST00000396354 IGHV4-31P0DP07 118 aa6.85□□□□□ -1.31
NDE1-201ENST00000396354 NDUFA7O95182 113 aa6.84□□□□□ -1.31
NDE1-201ENST00000396354 RBMY1A1P0DJD3 496 aaKnown RBP6.84□□□□□ -1.31
NDE1-201ENST00000396354 RBMY1CP0DJD4 496 aa6.84□□□□□ -1.31
NDE1-201ENST00000396354 CKS1BP61024 79 aa6.84□□□□□ -1.31
NDE1-201ENST00000396354 RBMY1FQ15415 496 aaKnown RBP6.84□□□□□ -1.31
NDE1-201ENST00000396354 Q96MF0 132 aa6.84□□□□□ -1.31
NDE1-201ENST00000396354 FSHBP01225 129 aa6.84□□□□□ -1.31
NDE1-201ENST00000396354 POLR2KP53803 58 aaKnown RBP6.84□□□□□ -1.31
NDE1-201ENST00000396354 LINC01587Q99440 93 aa6.84□□□□□ -1.31
NDE1-201ENST00000396354 KIF25-AS1Q9Y6Z4 181 aa6.84□□□□□ -1.31
NDE1-201ENST00000396354 LINC01546A6NGU7 62 aa6.84□□□□□ -1.32
NDE1-201ENST00000396354 M0QY20 66 aa6.84□□□□□ -1.32
NDE1-201ENST00000396354 FOXI1Q12951 378 aa6.84□□□□□ -1.32
NDE1-201ENST00000396354 FHL3Q13643 280 aa6.84□□□□□ -1.32
NDE1-201ENST00000396354 DGAT2L7PQ6IED9 249 aa6.84□□□□□ -1.32
NDE1-201ENST00000396354 WFDC11Q8NEX6 87 aa6.84□□□□□ -1.32
NDE1-201ENST00000396354 TNFRSF18Q9Y5U5 241 aa6.84□□□□□ -1.32
NDE1-201ENST00000396354 A0A0J9YX75 114 aa6.83□□□□□ -1.32
NDE1-201ENST00000396354 KLLNB2CW77 178 aa6.83□□□□□ -1.32
NDE1-201ENST00000396354 Q6ZSN1 163 aa6.83□□□□□ -1.32
NDE1-201ENST00000396354 LENEPQ9Y5L5 61 aa6.83□□□□□ -1.32
NDE1-201ENST00000396354 BRI3O95415 125 aa6.83□□□□□ -1.32
NDE1-201ENST00000396354 SCGB1A1P11684 91 aa6.83□□□□□ -1.32
NDE1-201ENST00000396354 ANKRD29Q8N6D5 301 aa6.83□□□□□ -1.32
NDE1-201ENST00000396354 PRO1854Q9UHT4 67 aa6.83□□□□□ -1.32
NDE1-201ENST00000396354 FAM19A4Q96LR4 140 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 PRO0461Q9UI25 63 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 TRAV13-1A0A0B4J241 112 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 A8MWV9 139 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 DSCR9P59020 149 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 TAL2Q16559 108 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 DYNLRB2Q8TF09 96 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 ZNF702PQ9H963 129 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 OTOGQ6ZRI0 2925 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 H3BUA1 57 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 IGHV3-30P01768 117 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 IGHV3-30-5P0DP03 117 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 XGP55808 180 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 CFAP126Q5VTH2 177 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 TMEM61Q8N0U2 210 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 TIMM21Q9BVV7 248 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 ERG28Q9UKR5 140 aa6.82□□□□□ -1.32
NDE1-201ENST00000396354 PPP1R17O96001 155 aa6.81□□□□□ -1.32
NDE1-201ENST00000396354 ZNF22P17026 224 aaPredicted RBP6.81□□□□□ -1.32
NDE1-201ENST00000396354 LRRC75A-AS1Q8N1F1 130 aa6.81□□□□□ -1.32
NDE1-201ENST00000396354 CLEC2BQ92478 149 aa6.81□□□□□ -1.32
NDE1-201ENST00000396354 C1QTNF4Q9BXJ3 329 aa6.81□□□□□ -1.32
NDE1-201ENST00000396354 C10orf126Q8N4M7 172 aa6.81□□□□□ -1.32
NDE1-201ENST00000396354 NTN5Q8WTR8 489 aaPredicted RBP6.81□□□□□ -1.32
NDE1-201ENST00000396354 GEMIN7Q9H840 131 aaKnown RBP6.81□□□□□ -1.32
NDE1-201ENST00000396354 VWFP04275 2813 aa6.81□□□□□ -1.32
NDE1-201ENST00000396354 I3L3M4 83 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 IGLV4-3A0A075B6K6 122 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 TRBV20-1A0A075B6N2 111 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 TEX49A0A1B0GTD5 131 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 RHODO00212 210 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 SLC25A20O43772 301 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 IGHV3-30-3P0DP02 117 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 C20orf203Q8NBC4 194 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 GATA3P23771 443 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 UBE2D1P51668 147 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 ADAMTSL4-AS1Q5T5F5 129 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 Q6ZUT4 128 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 CARD19Q96LW7 228 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 VPREB3Q9UKI3 123 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 ATRQ13535 2644 aa6.8□□□□□ -1.32
NDE1-201ENST00000396354 TRGV1A0A0A0MS02 117 aa6.79□□□□□ -1.32
NDE1-201ENST00000396354 Q6YL49 198 aa6.79□□□□□ -1.32
NDE1-201ENST00000396354 SLC25A29Q8N8R3 303 aa6.79□□□□□ -1.32
NDE1-201ENST00000396354 NDUFA12Q9UI09 145 aa6.79□□□□□ -1.32
NDE1-201ENST00000396354 TRBV27A0A0K0K1C4 114 aa6.79□□□□□ -1.32
NDE1-201ENST00000396354 K7EQG2 157 aa6.79□□□□□ -1.32
NDE1-201ENST00000396354 C11orf68Q9H3H3 251 aaKnown RBP6.79□□□□□ -1.32
NDE1-201ENST00000396354 SS18L2Q9UHA2 77 aa6.79□□□□□ -1.32
NDE1-201ENST00000396354 WFDC10AQ9H1F0 79 aa6.78□□□□□ -1.32
NDE1-201ENST00000396354 C3orf56Q8N813 242 aa6.78□□□□□ -1.32
NDE1-201ENST00000396354 TMEM141Q96I45 108 aa6.78□□□□□ -1.32
NDE1-201ENST00000396354 LINC00467Q9BRT7 94 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms