RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 TIRAPP58753 221 aa6.35□□□□□ -1.39
BDNF-204ENST00000395980 DNAJC30Q96LL9 226 aa6.35□□□□□ -1.39
BDNF-204ENST00000395980 ZFHX2Q9C0A1 2572 aaPredicted RBP6.35□□□□□ -1.39
BDNF-204ENST00000395980 TRBV7-7A0A0K0K1E9 115 aa6.34□□□□□ -1.39
BDNF-204ENST00000395980 ACYP1P07311 99 aa6.34□□□□□ -1.39
BDNF-204ENST00000395980 MSMBP08118 114 aa6.34□□□□□ -1.39
BDNF-204ENST00000395980 COPS9Q8WXC6 57 aa6.34□□□□□ -1.39
BDNF-204ENST00000395980 PRORYQ9H606 182 aa6.34□□□□□ -1.39
BDNF-204ENST00000395980 ZNF415Q09FC8 603 aa6.34□□□□□ -1.4
BDNF-204ENST00000395980 LAMA5O15230 3695 aa6.33□□□□□ -1.4
BDNF-204ENST00000395980 COL6A6A6NMZ7 2263 aa6.33□□□□□ -1.4
BDNF-204ENST00000395980 CIRBPQ14011 172 aaKnown RBP6.33□□□□□ -1.4
BDNF-204ENST00000395980 CLEC2BQ92478 149 aa6.33□□□□□ -1.4
BDNF-204ENST00000395980 CCDC179H3BU77 68 aa6.33□□□□□ -1.4
BDNF-204ENST00000395980 RBMY1A1P0DJD3 496 aaKnown RBP6.33□□□□□ -1.4
BDNF-204ENST00000395980 RBMY1CP0DJD4 496 aa6.33□□□□□ -1.4
BDNF-204ENST00000395980 RBMY1FQ15415 496 aaKnown RBP6.33□□□□□ -1.4
BDNF-204ENST00000395980 CEMP1Q6PRD7 247 aaPredicted RBP6.33□□□□□ -1.4
BDNF-204ENST00000395980 LINC00467Q9BRT7 94 aa6.33□□□□□ -1.4
BDNF-204ENST00000395980 TMEM95Q3KNT9 176 aa6.33□□□□□ -1.4
BDNF-204ENST00000395980 IMUPQ9GZP8 106 aa6.33□□□□□ -1.4
BDNF-204ENST00000395980 PPDPFQ9H3Y8 114 aa6.33□□□□□ -1.4
BDNF-204ENST00000395980 IGHV3-53P01767 116 aa6.32□□□□□ -1.4
BDNF-204ENST00000395980 NBASA2RRP1 2371 aa6.32□□□□□ -1.4
BDNF-204ENST00000395980 IGLV5-39A0A0G2JS06 123 aa6.32□□□□□ -1.4
BDNF-204ENST00000395980 C19orf84I3L1E1 186 aa6.32□□□□□ -1.4
BDNF-204ENST00000395980 SYNJ2BPP57105 145 aa6.32□□□□□ -1.4
BDNF-204ENST00000395980 CSMD1Q96PZ7 3565 aa6.32□□□□□ -1.4
BDNF-204ENST00000395980 DOPEY2Q9Y3R5 2298 aa6.31□□□□□ -1.4
BDNF-204ENST00000395980 COX7A2LO14548 114 aa6.31□□□□□ -1.4
BDNF-204ENST00000395980 PROK1P58294 105 aa6.31□□□□□ -1.4
BDNF-204ENST00000395980 RNASE13Q5GAN3 156 aaKnown RBP6.31□□□□□ -1.4
BDNF-204ENST00000395980 FAM19A3Q7Z5A8 133 aa6.31□□□□□ -1.4
BDNF-204ENST00000395980 HIVEP3Q5T1R4 2406 aa6.31□□□□□ -1.4
BDNF-204ENST00000395980 IGHV3-73A0A0B4J1V6 119 aa6.31□□□□□ -1.4
BDNF-204ENST00000395980 TMEM101Q96IK0 257 aa6.31□□□□□ -1.4
BDNF-204ENST00000395980 CDKN2A-AS1Q9UH64 79 aa6.31□□□□□ -1.4
BDNF-204ENST00000395980 HERVK_113P63121 156 aa6.31□□□□□ -1.4
BDNF-204ENST00000395980 BEAN1Q3B7T3 259 aa6.31□□□□□ -1.4
BDNF-204ENST00000395980 DUX3Q96PT4 197 aa6.31□□□□□ -1.4
BDNF-204ENST00000395980 CCL19Q99731 98 aa6.31□□□□□ -1.4
BDNF-204ENST00000395980 CITED2Q99967 270 aaPredicted RBP6.31□□□□□ -1.4
BDNF-204ENST00000395980 NACAE9PAV3 2078 aa6.3□□□□□ -1.4
BDNF-204ENST00000395980 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.3□□□□□ -1.4
BDNF-204ENST00000395980 IGKV2-29A2NJV5 120 aaPredicted RBP6.3□□□□□ -1.4
BDNF-204ENST00000395980 A8MZ25 164 aa6.3□□□□□ -1.4
BDNF-204ENST00000395980 B4DSR2 109 aa6.3□□□□□ -1.4
BDNF-204ENST00000395980 Q6ZSV7 163 aa6.3□□□□□ -1.4
BDNF-204ENST00000395980 LINC00308Q8TCZ7 52 aa6.3□□□□□ -1.4
BDNF-204ENST00000395980 MUC6Q6W4X9 2439 aa6.3□□□□□ -1.4
BDNF-204ENST00000395980 IGHV4-30-2A0A087WSY4 118 aa6.3□□□□□ -1.4
BDNF-204ENST00000395980 HOXD3P31249 432 aaPredicted RBP6.3□□□□□ -1.4
BDNF-204ENST00000395980 NPC2P61916 151 aa6.3□□□□□ -1.4
BDNF-204ENST00000395980 UBE2E2Q96LR5 201 aa6.3□□□□□ -1.4
BDNF-204ENST00000395980 TRACP01848 142 aa6.29□□□□□ -1.4
BDNF-204ENST00000395980 SHISA2Q6UWI4 295 aa6.29□□□□□ -1.4
BDNF-204ENST00000395980 Q6ZSN1 163 aa6.29□□□□□ -1.4
BDNF-204ENST00000395980 CEP295Q9C0D2 2601 aa6.29□□□□□ -1.4
BDNF-204ENST00000395980 SPTAN1Q13813 2472 aaKnown RBP6.29□□□□□ -1.4
BDNF-204ENST00000395980 KNCNA6PVL3 124 aa6.29□□□□□ -1.4
BDNF-204ENST00000395980 RS1O15537 224 aa6.29□□□□□ -1.4
BDNF-204ENST00000395980 C10orf99Q6UWK7 81 aa6.29□□□□□ -1.4
BDNF-204ENST00000395980 FAM110AQ9BQ89 295 aa6.29□□□□□ -1.4
BDNF-204ENST00000395980 IGHV4-59P01825 116 aa6.29□□□□□ -1.4
BDNF-204ENST00000395980 AVPP01185 164 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 ATP5J2P56134 94 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 DEFB131AP59861 70 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 C11orf72Q8NBR9 251 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 DUX5Q96PT3 197 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 RBMY1BA6NDE4 496 aaKnown RBP6.28□□□□□ -1.4
BDNF-204ENST00000395980 RBMY1EA6NEQ0 496 aaKnown RBP6.28□□□□□ -1.4
BDNF-204ENST00000395980 RBMY1DP0C7P1 496 aaKnown RBP6.28□□□□□ -1.4
BDNF-204ENST00000395980 FAM222AQ5U5X8 452 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 DGAT2L7PQ6IED9 249 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 Q9H8V8 135 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 CSDC2Q9Y534 153 aaKnown RBP6.28□□□□□ -1.4
BDNF-204ENST00000395980 DEFB112Q30KQ8 113 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 IGHV3OR16-12A0A075B7B8 117 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 HTN1P15515 57 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 SDIM1Q6ZPB5 146 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 LINC00643Q86TS7 51 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 TMEM126AQ9H061 195 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 Q9UF83 564 aa6.28□□□□□ -1.4
BDNF-204ENST00000395980 AKAP6Q13023 2319 aa6.27□□□□□ -1.41
BDNF-204ENST00000395980 HERV-K104P63124 156 aa6.27□□□□□ -1.41
BDNF-204ENST00000395980 MEIG1Q5JSS6 88 aa6.27□□□□□ -1.41
BDNF-204ENST00000395980 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.27□□□□□ -1.41
BDNF-204ENST00000395980 DAND5Q8N907 189 aa6.27□□□□□ -1.41
BDNF-204ENST00000395980 DSCR9P59020 149 aa6.27□□□□□ -1.41
BDNF-204ENST00000395980 LINC00242Q5T6M2 205 aa6.27□□□□□ -1.41
BDNF-204ENST00000395980 ATP5G1P05496 136 aa6.27□□□□□ -1.41
BDNF-204ENST00000395980 SMIM1B2RUZ4 78 aa6.26□□□□□ -1.41
BDNF-204ENST00000395980 ZNF625Q96I27 306 aaPredicted RBP6.26□□□□□ -1.41
BDNF-204ENST00000395980 J3QLI3 93 aa6.26□□□□□ -1.41
BDNF-204ENST00000395980 INSP01308 110 aa6.26□□□□□ -1.41
BDNF-204ENST00000395980 COX6A2Q02221 97 aa6.26□□□□□ -1.41
BDNF-204ENST00000395980 IGHV3-38A0A0C4DH36 116 aa6.26□□□□□ -1.41
BDNF-204ENST00000395980 PF4P02776 101 aa6.26□□□□□ -1.41
BDNF-204ENST00000395980 VPREB3Q9UKI3 123 aa6.26□□□□□ -1.41
BDNF-204ENST00000395980 ATRXP46100 2492 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms