RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 IGHV1-18A0A0C4DH31 117 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 CCL21O00585 134 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 PPP1R17O96001 155 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 BAALC-AS2P0C853 105 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 MRGPRG-AS1Q2M3A8 158 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 Q6ZSV7 163 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 RNF182Q8N6D2 247 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 PTPN13Q12923 2485 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 ZANQ9Y493 2812 aa7.22□□□□□ -1.25
CDRT1-204ENST00000395906 RBMY1BA6NDE4 496 aaKnown RBP7.22□□□□□ -1.25
CDRT1-204ENST00000395906 RBMY1EA6NEQ0 496 aaKnown RBP7.22□□□□□ -1.25
CDRT1-204ENST00000395906 I3L2K1 104 aa7.22□□□□□ -1.25
CDRT1-204ENST00000395906 RBMY1DP0C7P1 496 aaKnown RBP7.22□□□□□ -1.25
CDRT1-204ENST00000395906 RBMY1A1P0DJD3 496 aaKnown RBP7.22□□□□□ -1.25
CDRT1-204ENST00000395906 RBMY1CP0DJD4 496 aa7.22□□□□□ -1.25
CDRT1-204ENST00000395906 RBMY1FQ15415 496 aaKnown RBP7.22□□□□□ -1.25
CDRT1-204ENST00000395906 MSMPQ1L6U9 139 aa7.22□□□□□ -1.25
CDRT1-204ENST00000395906 M0R1W7 72 aa7.22□□□□□ -1.25
CDRT1-204ENST00000395906 COX7A2LO14548 114 aa7.22□□□□□ -1.25
CDRT1-204ENST00000395906 IGKV3-15P01624 115 aa7.22□□□□□ -1.25
CDRT1-204ENST00000395906 MIAQ16674 131 aa7.22□□□□□ -1.25
CDRT1-204ENST00000395906 C11orf21Q9P2W6 132 aa7.22□□□□□ -1.25
CDRT1-204ENST00000395906 MAST4O15021 2626 aa7.21□□□□□ -1.25
CDRT1-204ENST00000395906 TRAV12-3A0A0B4J271 114 aa7.21□□□□□ -1.25
CDRT1-204ENST00000395906 XCL1P47992 114 aa7.21□□□□□ -1.25
CDRT1-204ENST00000395906 XCL2Q9UBD3 114 aa7.21□□□□□ -1.25
CDRT1-204ENST00000395906 ARFGEF3Q5TH69 2177 aa7.21□□□□□ -1.25
CDRT1-204ENST00000395906 APELAP0DMC3 54 aa7.21□□□□□ -1.26
CDRT1-204ENST00000395906 APRG1Q8IVJ8 170 aa7.21□□□□□ -1.26
CDRT1-204ENST00000395906 LINC01560Q8TB33 94 aa7.21□□□□□ -1.26
CDRT1-204ENST00000395906 UBE2D4Q9Y2X8 147 aa7.21□□□□□ -1.26
CDRT1-204ENST00000395906 FBN2P35556 2912 aa7.2□□□□□ -1.26
CDRT1-204ENST00000395906 DNAL4O96015 105 aa7.2□□□□□ -1.26
CDRT1-204ENST00000395906 GHRHP01286 108 aa7.2□□□□□ -1.26
CDRT1-204ENST00000395906 C22orf24Q9Y442 160 aa7.2□□□□□ -1.26
CDRT1-204ENST00000395906 UBR5O95071 2799 aaPredicted RBP7.2□□□□□ -1.26
CDRT1-204ENST00000395906 H7BZZ5 65 aa7.2□□□□□ -1.26
CDRT1-204ENST00000395906 PMAIP1Q13794 54 aa7.2□□□□□ -1.26
CDRT1-204ENST00000395906 C20orf197Q8N268 126 aa7.2□□□□□ -1.26
CDRT1-204ENST00000395906 FANCD2OSQ96PS1 177 aa7.2□□□□□ -1.26
CDRT1-204ENST00000395906 UNC79Q9P2D8 2635 aa7.2□□□□□ -1.26
CDRT1-204ENST00000395906 WNK2Q9Y3S1 2297 aa7.2□□□□□ -1.26
CDRT1-204ENST00000395906 PLXNB1O43157 2135 aa7.2□□□□□ -1.26
CDRT1-204ENST00000395906 IGHV3-64A0A075B6Q5 118 aa7.19□□□□□ -1.26
CDRT1-204ENST00000395906 BEAN1Q3B7T3 259 aa7.19□□□□□ -1.26
CDRT1-204ENST00000395906 RNASE6Q93091 150 aaKnown RBP7.19□□□□□ -1.26
CDRT1-204ENST00000395906 VSIG2Q96IQ7 327 aa7.19□□□□□ -1.26
CDRT1-204ENST00000395906 NACAE9PAV3 2078 aa7.19□□□□□ -1.26
CDRT1-204ENST00000395906 GCN1Q92616 2671 aaKnown RBP7.19□□□□□ -1.26
CDRT1-204ENST00000395906 LOXP28300 417 aaPredicted RBP7.19□□□□□ -1.26
CDRT1-204ENST00000395906 CIRBPQ14011 172 aaKnown RBP7.19□□□□□ -1.26
CDRT1-204ENST00000395906 ADAMTSL4-AS1Q5T5F5 129 aa7.19□□□□□ -1.26
CDRT1-204ENST00000395906 BBC3Q96PG8 261 aaPredicted RBP7.19□□□□□ -1.26
CDRT1-204ENST00000395906 FLNBO75369 2602 aaKnown RBP7.19□□□□□ -1.26
CDRT1-204ENST00000395906 GNLYP22749 145 aa7.18□□□□□ -1.26
CDRT1-204ENST00000395906 RPL39P62891 51 aaKnown RBP7.18□□□□□ -1.26
CDRT1-204ENST00000395906 NOTCH2Q04721 2471 aa7.18□□□□□ -1.26
CDRT1-204ENST00000395906 ADORA2A-AS1P86434 159 aa7.18□□□□□ -1.26
CDRT1-204ENST00000395906 BSPH1Q075Z2 132 aa7.18□□□□□ -1.26
CDRT1-204ENST00000395906 DOPEY2Q9Y3R5 2298 aa7.18□□□□□ -1.26
CDRT1-204ENST00000395906 PRRC2AP48634 2157 aaKnown RBP7.18□□□□□ -1.26
CDRT1-204ENST00000395906 ZNF469Q96JG9 3925 aaPredicted RBP7.18□□□□□ -1.26
CDRT1-204ENST00000395906 TEX22C9J3V5 150 aa7.17□□□□□ -1.26
CDRT1-204ENST00000395906 IGLV1-44P01699 117 aa7.17□□□□□ -1.26
CDRT1-204ENST00000395906 IGHV1-69P01742 117 aa7.17□□□□□ -1.26
CDRT1-204ENST00000395906 MGPP08493 103 aa7.17□□□□□ -1.26
CDRT1-204ENST00000395906 IGFL4Q6B9Z1 124 aa7.17□□□□□ -1.26
CDRT1-204ENST00000395906 LYPD5Q6UWN5 251 aa7.17□□□□□ -1.26
CDRT1-204ENST00000395906 GPHB5Q86YW7 130 aa7.17□□□□□ -1.26
CDRT1-204ENST00000395906 CCDC168Q8NDH2 2452 aa7.17□□□□□ -1.26
CDRT1-204ENST00000395906 SPRY3O43610 288 aa7.16□□□□□ -1.26
CDRT1-204ENST00000395906 LHBP01229 141 aa7.16□□□□□ -1.26
CDRT1-204ENST00000395906 IGHV3-30-3P0DP02 117 aa7.16□□□□□ -1.26
CDRT1-204ENST00000395906 RETNQ9HD89 108 aa7.16□□□□□ -1.26
CDRT1-204ENST00000395906 LINC00846Q9NV44 126 aa7.16□□□□□ -1.26
CDRT1-204ENST00000395906 ITPR2Q14571 2701 aa7.16□□□□□ -1.26
CDRT1-204ENST00000395906 ADARB2-AS1A8MUL3 147 aa7.16□□□□□ -1.26
CDRT1-204ENST00000395906 K7EIM0 57 aa7.16□□□□□ -1.26
CDRT1-204ENST00000395906 C1orf158Q8N1D5 194 aa7.16□□□□□ -1.26
CDRT1-204ENST00000395906 ZFAND3Q9H8U3 227 aa7.16□□□□□ -1.26
CDRT1-204ENST00000395906 LINC00474Q9P2X8 69 aa7.16□□□□□ -1.26
CDRT1-204ENST00000395906 HECTD1Q9ULT8 2610 aa7.16□□□□□ -1.26
CDRT1-204ENST00000395906 TRBV7-6A0A0J9YX20 115 aa7.15□□□□□ -1.26
CDRT1-204ENST00000395906 TMEM89A2RUT3 159 aa7.15□□□□□ -1.26
CDRT1-204ENST00000395906 PRAC2D3DTV9 90 aa7.15□□□□□ -1.26
CDRT1-204ENST00000395906 VCYO14598 125 aa7.15□□□□□ -1.26
CDRT1-204ENST00000395906 CCKP06307 115 aa7.15□□□□□ -1.26
CDRT1-204ENST00000395906 CD164Q04900 197 aa7.15□□□□□ -1.26
CDRT1-204ENST00000395906 RNF7Q9UBF6 113 aa7.15□□□□□ -1.26
CDRT1-204ENST00000395906 ZNF580Q9UK33 172 aa7.15□□□□□ -1.26
CDRT1-204ENST00000395906 SMAD5-AS1Q9Y6J3 95 aa7.15□□□□□ -1.26
CDRT1-204ENST00000395906 RAI1Q7Z5J4 1906 aaPredicted RBP7.15□□□□□ -1.26
CDRT1-204ENST00000395906 ARHGAP32A7KAX9 2087 aa7.15□□□□□ -1.27
CDRT1-204ENST00000395906 TLN2Q9Y4G6 2542 aa7.15□□□□□ -1.27
CDRT1-204ENST00000395906 TIMM17BO60830 172 aa7.14□□□□□ -1.27
CDRT1-204ENST00000395906 GAFA1Q96PS6 74 aa7.14□□□□□ -1.27
CDRT1-204ENST00000395906 NAV2Q8IVL1 2488 aa7.14□□□□□ -1.27
CDRT1-204ENST00000395906 ZNF561-AS1K7EIQ3 104 aa7.14□□□□□ -1.27
CDRT1-204ENST00000395906 POLR2KP53803 58 aaKnown RBP7.14□□□□□ -1.27
CDRT1-204ENST00000395906 NDUFA12Q9UI09 145 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms