RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 MUC21Q5SSG8 566 aa8.66□□□□□ -1.02
VCPKMT-201ENST00000395859 SDIM1Q6ZPB5 146 aa8.66□□□□□ -1.02
VCPKMT-201ENST00000395859 OR2D3Q8NGH3 330 aa8.66□□□□□ -1.02
VCPKMT-201ENST00000395859 RMI2Q96E14 147 aa8.66□□□□□ -1.02
VCPKMT-201ENST00000395859 IGKV2D-24A0A075B6R9 120 aa8.65□□□□□ -1.02
VCPKMT-201ENST00000395859 TRAV21A0A0B4J279 112 aa8.65□□□□□ -1.02
VCPKMT-201ENST00000395859 A0A0U1RQV1 116 aa8.65□□□□□ -1.02
VCPKMT-201ENST00000395859 TRBV6-4A0A1B0GX49 114 aa8.65□□□□□ -1.02
VCPKMT-201ENST00000395859 LINC00694P0DN24 101 aa8.65□□□□□ -1.02
VCPKMT-201ENST00000395859 RIGQ13278 110 aa8.65□□□□□ -1.02
VCPKMT-201ENST00000395859 NUP35Q8NFH5 326 aa8.65□□□□□ -1.02
VCPKMT-201ENST00000395859 SGK494Q96LW2 274 aa8.65□□□□□ -1.02
VCPKMT-201ENST00000395859 CNFNQ9BYD5 112 aa8.65□□□□□ -1.02
VCPKMT-201ENST00000395859 DPH3P1Q9H4G8 78 aa8.65□□□□□ -1.02
VCPKMT-201ENST00000395859 TMA7Q9Y2S6 64 aaKnown RBP8.65□□□□□ -1.02
VCPKMT-201ENST00000395859 A0A1B0GUT8 65 aa8.64□□□□□ -1.03
VCPKMT-201ENST00000395859 SH2D1AO60880 128 aa8.64□□□□□ -1.03
VCPKMT-201ENST00000395859 CRIP1P50238 77 aa8.64□□□□□ -1.03
VCPKMT-201ENST00000395859 HBBP68871 147 aa8.64□□□□□ -1.03
VCPKMT-201ENST00000395859 C14orf177Q52M58 125 aa8.64□□□□□ -1.03
VCPKMT-201ENST00000395859 DNLZQ5SXM8 178 aa8.64□□□□□ -1.03
VCPKMT-201ENST00000395859 GATD1Q8NB37 220 aa8.64□□□□□ -1.03
VCPKMT-201ENST00000395859 KCNS1Q96KK3 526 aa8.64□□□□□ -1.03
VCPKMT-201ENST00000395859 TRAPPC1Q9Y5R8 145 aa8.64□□□□□ -1.03
VCPKMT-201ENST00000395859 A0A1B0GXF2 115 aa8.63□□□□□ -1.03
VCPKMT-201ENST00000395859 M0R2P5 195 aa8.63□□□□□ -1.03
VCPKMT-201ENST00000395859 PHOX2AO14813 284 aa8.63□□□□□ -1.03
VCPKMT-201ENST00000395859 TRGC2P03986 189 aa8.63□□□□□ -1.03
VCPKMT-201ENST00000395859 CTRLP40313 264 aa8.63□□□□□ -1.03
VCPKMT-201ENST00000395859 RHOHQ15669 191 aa8.63□□□□□ -1.03
VCPKMT-201ENST00000395859 COA6Q5JTJ3 125 aaKnown RBP8.63□□□□□ -1.03
VCPKMT-201ENST00000395859 NAGKQ9UJ70 344 aa8.62□□□□□ -1.03
VCPKMT-201ENST00000395859 CIDEAO60543 219 aa8.61□□□□□ -1.03
VCPKMT-201ENST00000395859 PRSS1P07477 247 aa8.61□□□□□ -1.03
VCPKMT-201ENST00000395859 OR5AL1P0C617 328 aa8.61□□□□□ -1.03
VCPKMT-201ENST00000395859 CACNG7P62955 275 aa8.61□□□□□ -1.03
VCPKMT-201ENST00000395859 DGAT2L7PQ6IED9 249 aa8.61□□□□□ -1.03
VCPKMT-201ENST00000395859 NIT1Q86X76 327 aa8.61□□□□□ -1.03
VCPKMT-201ENST00000395859 GTSF1Q8WW33 167 aa8.61□□□□□ -1.03
VCPKMT-201ENST00000395859 PRADC1Q9BSG0 188 aa8.61□□□□□ -1.03
VCPKMT-201ENST00000395859 C5orf52A6NGY3 159 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 GNRH2O43555 120 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 HIST1H2BKO60814 126 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 HIST1H2BJP06899 126 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 IGLC6P0CF74 106 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 HIST1H2BOP23527 126 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 HIST1H2BBP33778 126 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 HIST1H2BDP58876 126 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 HIST1H2BCP62807 126 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 HIST2H2BEQ16778 126 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 TMEM136Q6ZRR5 245 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 FER1L6-AS1Q8NA97 138 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 HIST1H2BHQ93079 126 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 HIST1H2BNQ99877 126 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 HIST1H2BMQ99879 126 aa8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 SSBP4Q9BWG4 385 aaPredicted RBP8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 MRPL18Q9H0U6 180 aaKnown RBP8.6□□□□□ -1.03
VCPKMT-201ENST00000395859 TRGC1P0CF51 173 aa8.59□□□□□ -1.03
VCPKMT-201ENST00000395859 ZNF80P51504 273 aaPredicted RBP8.59□□□□□ -1.03
VCPKMT-201ENST00000395859 Q0VG73 95 aa8.59□□□□□ -1.03
VCPKMT-201ENST00000395859 FABP9Q0Z7S8 132 aa8.59□□□□□ -1.03
VCPKMT-201ENST00000395859 CFAP126Q5VTH2 177 aa8.59□□□□□ -1.03
VCPKMT-201ENST00000395859 KLK12Q9UKR0 248 aa8.59□□□□□ -1.03
VCPKMT-201ENST00000395859 KIF25-AS1Q9Y6Z4 181 aa8.59□□□□□ -1.03
VCPKMT-201ENST00000395859 A0A087WYN8 130 aa8.58□□□□□ -1.04
VCPKMT-201ENST00000395859 SNAI2O43623 268 aa8.58□□□□□ -1.04
VCPKMT-201ENST00000395859 APCSP02743 223 aa8.58□□□□□ -1.04
VCPKMT-201ENST00000395859 PACRGQ96M98 296 aaPredicted RBP8.58□□□□□ -1.04
VCPKMT-201ENST00000395859 LOC105371267A0A1B0GV96 52 aa8.57□□□□□ -1.04
VCPKMT-201ENST00000395859 USP17L23D6RBM5 183 aa8.57□□□□□ -1.04
VCPKMT-201ENST00000395859 RAB4BP61018 213 aa8.57□□□□□ -1.04
VCPKMT-201ENST00000395859 PRR3P79522 188 aaKnown RBP8.57□□□□□ -1.04
VCPKMT-201ENST00000395859 PIK3CD-AS1Q5SR53 167 aa8.57□□□□□ -1.04
VCPKMT-201ENST00000395859 SMIM15Q7Z3B0 74 aa8.57□□□□□ -1.04
VCPKMT-201ENST00000395859 UBE2WQ96B02 151 aa8.57□□□□□ -1.04
VCPKMT-201ENST00000395859 RNF185Q96GF1 192 aa8.57□□□□□ -1.04
VCPKMT-201ENST00000395859 PGLYRP4Q96LB8 373 aa8.57□□□□□ -1.04
VCPKMT-201ENST00000395859 CRCT1Q9UGL9 99 aa8.57□□□□□ -1.04
VCPKMT-201ENST00000395859 MUC17Q685J3 4493 aa8.56□□□□□ -1.04
VCPKMT-201ENST00000395859 IGKV3D-20A0A0C4DH25 116 aa8.56□□□□□ -1.04
VCPKMT-201ENST00000395859 PPBPP02775 128 aa8.56□□□□□ -1.04
VCPKMT-201ENST00000395859 ZNF876PQ49A33 203 aa8.56□□□□□ -1.04
VCPKMT-201ENST00000395859 MRPL54Q6P161 138 aaKnown RBP8.56□□□□□ -1.04
VCPKMT-201ENST00000395859 PTH2Q96A98 100 aa8.56□□□□□ -1.04
VCPKMT-201ENST00000395859 TMEM191AQ9H0A3 160 aa8.56□□□□□ -1.04
VCPKMT-201ENST00000395859 PLAC8Q9NZF1 115 aa8.56□□□□□ -1.04
VCPKMT-201ENST00000395859 Q9UF83 564 aa8.56□□□□□ -1.04
VCPKMT-201ENST00000395859 LAMTOR2Q9Y2Q5 125 aa8.56□□□□□ -1.04
VCPKMT-201ENST00000395859 ESDP10768 282 aa8.55□□□□□ -1.04
VCPKMT-201ENST00000395859 LYZL1Q6UWQ5 148 aa8.55□□□□□ -1.04
VCPKMT-201ENST00000395859 SPACA4Q8TDM5 124 aa8.55□□□□□ -1.04
VCPKMT-201ENST00000395859 CAMPP49913 170 aa8.54□□□□□ -1.04
VCPKMT-201ENST00000395859 ENHOQ6UWT2 76 aa8.54□□□□□ -1.04
VCPKMT-201ENST00000395859 ZFP82Q8N141 532 aa8.54□□□□□ -1.04
VCPKMT-201ENST00000395859 CHCHD7Q9BUK0 85 aa8.54□□□□□ -1.04
VCPKMT-201ENST00000395859 IGHV3-73A0A0B4J1V6 119 aa8.53□□□□□ -1.04
VCPKMT-201ENST00000395859 PPP1R17O96001 155 aa8.53□□□□□ -1.04
VCPKMT-201ENST00000395859 ARMS2P0C7Q2 107 aa8.53□□□□□ -1.04
VCPKMT-201ENST00000395859 S100A4P26447 101 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms