RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 C20orf78Q9BR46 151 aa11.21□□□□□ -0.61
CXCL1-201ENST00000395761 TRAV9-2A0A087WT02 112 aa11.2□□□□□ -0.62
CXCL1-201ENST00000395761 PRSS29PA6NIE9 313 aa11.2□□□□□ -0.62
CXCL1-201ENST00000395761 TNFRSF6BO95407 300 aa11.2□□□□□ -0.62
CXCL1-201ENST00000395761 NCR2O95944 276 aa11.2□□□□□ -0.62
CXCL1-201ENST00000395761 IGHV3-30P01768 117 aa11.2□□□□□ -0.62
CXCL1-201ENST00000395761 IGHV3-33P01772 117 aa11.2□□□□□ -0.62
CXCL1-201ENST00000395761 IGHV3-30-3P0DP02 117 aa11.2□□□□□ -0.62
CXCL1-201ENST00000395761 IGHV3-30-5P0DP03 117 aa11.2□□□□□ -0.62
CXCL1-201ENST00000395761 LINC01556Q5JQF7 62 aa11.2□□□□□ -0.62
CXCL1-201ENST00000395761 ALKBH7Q9BT30 221 aaPredicted RBP11.2□□□□□ -0.62
CXCL1-201ENST00000395761 NPYP01303 97 aa11.19□□□□□ -0.62
CXCL1-201ENST00000395761 TRGC2P03986 189 aa11.19□□□□□ -0.62
CXCL1-201ENST00000395761 POLR2KP53803 58 aaKnown RBP11.19□□□□□ -0.62
CXCL1-201ENST00000395761 RPL32P62910 135 aaKnown RBP11.19□□□□□ -0.62
CXCL1-201ENST00000395761 NTM-AS1Q6ZSK4 140 aa11.19□□□□□ -0.62
CXCL1-201ENST00000395761 ST20Q9HBF5 79 aa11.19□□□□□ -0.62
CXCL1-201ENST00000395761 TRBV6-8A0A0A6YYG3 113 aa11.18□□□□□ -0.62
CXCL1-201ENST00000395761 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
CXCL1-201ENST00000395761 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
CXCL1-201ENST00000395761 SDHAF1A6NFY7 115 aa11.17□□□□□ -0.62
CXCL1-201ENST00000395761 SUMO2P61956 95 aaKnown RBP11.17□□□□□ -0.62
CXCL1-201ENST00000395761 DEFB104AQ8WTQ1 72 aa11.17□□□□□ -0.62
CXCL1-201ENST00000395761 TMEM70Q9BUB7 260 aa11.17□□□□□ -0.62
CXCL1-201ENST00000395761 TRBV27A0A0K0K1C4 114 aa11.16□□□□□ -0.62
CXCL1-201ENST00000395761 K7EP13 123 aa11.16□□□□□ -0.62
CXCL1-201ENST00000395761 BTF3P20290 206 aaKnown RBP11.16□□□□□ -0.62
CXCL1-201ENST00000395761 TNP2Q05952 138 aa11.16□□□□□ -0.62
CXCL1-201ENST00000395761 Q6ZRN7 208 aaPredicted RBP11.16□□□□□ -0.62
CXCL1-201ENST00000395761 NIT1Q86X76 327 aa11.16□□□□□ -0.62
CXCL1-201ENST00000395761 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.16□□□□□ -0.62
CXCL1-201ENST00000395761 A0A1B0GVY2 172 aa11.15□□□□□ -0.62
CXCL1-201ENST00000395761 IBA57-AS1B1ANH7 110 aa11.15□□□□□ -0.62
CXCL1-201ENST00000395761 VCYO14598 125 aa11.15□□□□□ -0.62
CXCL1-201ENST00000395761 C10orf126Q8N4M7 172 aa11.15□□□□□ -0.62
CXCL1-201ENST00000395761 MAP1LC3AQ9H492 121 aa11.15□□□□□ -0.62
CXCL1-201ENST00000395761 TMEM97Q5BJF2 176 aa11.14□□□□□ -0.63
CXCL1-201ENST00000395761 HECTD4Q9Y4D8 3996 aa11.13□□□□□ -0.63
CXCL1-201ENST00000395761 PKD1P98161 4303 aa11.13□□□□□ -0.63
CXCL1-201ENST00000395761 I3L3M4 83 aa11.13□□□□□ -0.63
CXCL1-201ENST00000395761 PMCHP20382 165 aa11.13□□□□□ -0.63
CXCL1-201ENST00000395761 CHCHD5Q9BSY4 110 aa11.13□□□□□ -0.63
CXCL1-201ENST00000395761 SMIM2Q9BVW6 85 aa11.13□□□□□ -0.63
CXCL1-201ENST00000395761 TMEM262E9PQX1 116 aa11.12□□□□□ -0.63
CXCL1-201ENST00000395761 Q8N8P6 123 aa11.12□□□□□ -0.63
CXCL1-201ENST00000395761 C18orf32Q8TCD1 76 aa11.12□□□□□ -0.63
CXCL1-201ENST00000395761 NXT2Q9NPJ8 142 aaKnown RBP11.12□□□□□ -0.63
CXCL1-201ENST00000395761 TCAPO15273 167 aa11.11□□□□□ -0.63
CXCL1-201ENST00000395761 Q0VG73 95 aa11.11□□□□□ -0.63
CXCL1-201ENST00000395761 IQCJQ1A5X6 159 aa11.11□□□□□ -0.63
CXCL1-201ENST00000395761 NFE4Q86UQ8 179 aa11.11□□□□□ -0.63
CXCL1-201ENST00000395761 KIR2DL4Q99706 377 aa11.11□□□□□ -0.63
CXCL1-201ENST00000395761 Q9HAA7 133 aa11.11□□□□□ -0.63
CXCL1-201ENST00000395761 TRBV25-1A0A075B6N4 114 aa11.1□□□□□ -0.63
CXCL1-201ENST00000395761 A0A087WX48 190 aa11.1□□□□□ -0.63
CXCL1-201ENST00000395761 IGHV1-24A0A0C4DH33 117 aa11.1□□□□□ -0.63
CXCL1-201ENST00000395761 LOC389332A0A1B0GUA5 103 aa11.1□□□□□ -0.63
CXCL1-201ENST00000395761 LINC01546A6NGU7 62 aa11.1□□□□□ -0.63
CXCL1-201ENST00000395761 K7EMI3 77 aa11.1□□□□□ -0.63
CXCL1-201ENST00000395761 GAGE6Q13070 117 aa11.1□□□□□ -0.63
CXCL1-201ENST00000395761 COTL1Q14019 142 aa11.1□□□□□ -0.63
CXCL1-201ENST00000395761 DNAH11Q96DT5 4516 aa11.09□□□□□ -0.63
CXCL1-201ENST00000395761 C1orf196B1AJZ1 125 aa11.09□□□□□ -0.63
CXCL1-201ENST00000395761 TSHBP01222 138 aa11.09□□□□□ -0.63
CXCL1-201ENST00000395761 IFI27P40305 119 aaPredicted RBP11.09□□□□□ -0.63
CXCL1-201ENST00000395761 MPV17L2Q567V2 206 aa11.09□□□□□ -0.63
CXCL1-201ENST00000395761 PRSS3P2Q8NHM4 247 aa11.09□□□□□ -0.63
CXCL1-201ENST00000395761 KLK12Q9UKR0 248 aa11.09□□□□□ -0.63
CXCL1-201ENST00000395761 BIRC6Q9NR09 4857 aa11.09□□□□□ -0.63
CXCL1-201ENST00000395761 LAGE3Q14657 143 aa11.08□□□□□ -0.64
CXCL1-201ENST00000395761 Q8N976 141 aa11.08□□□□□ -0.64
CXCL1-201ENST00000395761 TMEM243Q9BU79 118 aa11.08□□□□□ -0.64
CXCL1-201ENST00000395761 CHCHD7Q9BUK0 85 aa11.08□□□□□ -0.64
CXCL1-201ENST00000395761 HIST1H2BKO60814 126 aa11.07□□□□□ -0.64
CXCL1-201ENST00000395761 HIST1H2BJP06899 126 aa11.07□□□□□ -0.64
CXCL1-201ENST00000395761 HIST1H2BOP23527 126 aa11.07□□□□□ -0.64
CXCL1-201ENST00000395761 HIST1H2BBP33778 126 aa11.07□□□□□ -0.64
CXCL1-201ENST00000395761 HIST1H2BDP58876 126 aa11.07□□□□□ -0.64
CXCL1-201ENST00000395761 RAB5BP61020 215 aa11.07□□□□□ -0.64
CXCL1-201ENST00000395761 HIST1H2BCP62807 126 aa11.07□□□□□ -0.64
CXCL1-201ENST00000395761 RBX1P62877 108 aa11.07□□□□□ -0.64
CXCL1-201ENST00000395761 HIST2H2BEQ16778 126 aa11.07□□□□□ -0.64
CXCL1-201ENST00000395761 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.07□□□□□ -0.64
CXCL1-201ENST00000395761 HIST1H2BHQ93079 126 aa11.07□□□□□ -0.64
CXCL1-201ENST00000395761 HIST1H2BNQ99877 126 aa11.07□□□□□ -0.64
CXCL1-201ENST00000395761 HIST1H2BMQ99879 126 aa11.07□□□□□ -0.64
CXCL1-201ENST00000395761 LINC00614P0C842 121 aa11.06□□□□□ -0.64
CXCL1-201ENST00000395761 ESDP10768 282 aa11.06□□□□□ -0.64
CXCL1-201ENST00000395761 FCER1GP30273 86 aa11.06□□□□□ -0.64
CXCL1-201ENST00000395761 AMTP48728 403 aa11.06□□□□□ -0.64
CXCL1-201ENST00000395761 TRAV8-3A0A0A6YYJ7 113 aa11.05□□□□□ -0.64
CXCL1-201ENST00000395761 PKIAP61925 76 aa11.05□□□□□ -0.64
CXCL1-201ENST00000395761 FA2HQ7L5A8 372 aa11.05□□□□□ -0.64
CXCL1-201ENST00000395761 UBE2WQ96B02 151 aa11.05□□□□□ -0.64
CXCL1-201ENST00000395761 URB1-AS1Q96HZ7 61 aa11.05□□□□□ -0.64
CXCL1-201ENST00000395761 H7C423 109 aa11.04□□□□□ -0.64
CXCL1-201ENST00000395761 ANGP03950 147 aaKnown RBP11.04□□□□□ -0.64
CXCL1-201ENST00000395761 ORMDL2Q53FV1 153 aa11.04□□□□□ -0.64
CXCL1-201ENST00000395761 ENHOQ6UWT2 76 aa11.04□□□□□ -0.64
CXCL1-201ENST00000395761 CHCHD1Q96BP2 118 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms