RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 LAGE3Q14657 143 aa13.34□□□□□ -0.27
SNCA-203ENST00000394986 BTF3L4Q96K17 158 aa13.34□□□□□ -0.27
SNCA-203ENST00000394986 D6R8Y8 96 aa13.33□□□□□ -0.28
SNCA-203ENST00000394986 I3L3M4 83 aa13.33□□□□□ -0.28
SNCA-203ENST00000394986 APOC3P02656 99 aa13.33□□□□□ -0.28
SNCA-203ENST00000394986 PMCHP20382 165 aa13.33□□□□□ -0.28
SNCA-203ENST00000394986 CKS2P33552 79 aa13.33□□□□□ -0.28
SNCA-203ENST00000394986 POLR2KP53803 58 aaKnown RBP13.33□□□□□ -0.28
SNCA-203ENST00000394986 RBX1P62877 108 aa13.33□□□□□ -0.28
SNCA-203ENST00000394986 IMMP2LQ96T52 175 aa13.33□□□□□ -0.28
SNCA-203ENST00000394986 TMEM242Q9NWH2 141 aa13.33□□□□□ -0.28
SNCA-203ENST00000394986 UBE2WQ96B02 151 aa13.32□□□□□ -0.28
SNCA-203ENST00000394986 RPS10P5Q9NQ39 176 aa13.32□□□□□ -0.28
SNCA-203ENST00000394986 TSHBP01222 138 aa13.31□□□□□ -0.28
SNCA-203ENST00000394986 APCSP02743 223 aa13.31□□□□□ -0.28
SNCA-203ENST00000394986 ANGP03950 147 aaKnown RBP13.31□□□□□ -0.28
SNCA-203ENST00000394986 RHEBQ15382 184 aa13.31□□□□□ -0.28
SNCA-203ENST00000394986 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.3□□□□□ -0.28
SNCA-203ENST00000394986 IGKV2-29A2NJV5 120 aaPredicted RBP13.3□□□□□ -0.28
SNCA-203ENST00000394986 PKIAP61925 76 aa13.3□□□□□ -0.28
SNCA-203ENST00000394986 SUMO2P61956 95 aaKnown RBP13.3□□□□□ -0.28
SNCA-203ENST00000394986 TRAV8-3A0A0A6YYJ7 113 aa13.3□□□□□ -0.28
SNCA-203ENST00000394986 TRBV27A0A0K0K1C4 114 aa13.3□□□□□ -0.28
SNCA-203ENST00000394986 UBE2L6O14933 153 aa13.3□□□□□ -0.28
SNCA-203ENST00000394986 TNFRSF6BO95407 300 aa13.3□□□□□ -0.28
SNCA-203ENST00000394986 PPP1R17O96001 155 aa13.3□□□□□ -0.28
SNCA-203ENST00000394986 NPYP01303 97 aa13.3□□□□□ -0.28
SNCA-203ENST00000394986 ELOBQ15370 118 aa13.3□□□□□ -0.28
SNCA-203ENST00000394986 CLPSL2Q6UWE3 100 aa13.3□□□□□ -0.28
SNCA-203ENST00000394986 IGLV4-60A0A075B6I1 120 aa13.29□□□□□ -0.28
SNCA-203ENST00000394986 PSCAO43653 123 aa13.29□□□□□ -0.28
SNCA-203ENST00000394986 SLC7A5P1Q8MH63 180 aa13.29□□□□□ -0.28
SNCA-203ENST00000394986 BIRC6Q9NR09 4857 aa13.28□□□□□ -0.28
SNCA-203ENST00000394986 S100PP25815 95 aa13.28□□□□□ -0.28
SNCA-203ENST00000394986 NDUFA5Q16718 116 aa13.28□□□□□ -0.28
SNCA-203ENST00000394986 ENHOQ6UWT2 76 aa13.28□□□□□ -0.28
SNCA-203ENST00000394986 C20orf203Q8NBC4 194 aa13.28□□□□□ -0.28
SNCA-203ENST00000394986 TRBV24-1A0A075B6N3 115 aa13.27□□□□□ -0.29
SNCA-203ENST00000394986 VCYO14598 125 aa13.27□□□□□ -0.29
SNCA-203ENST00000394986 CRPP02741 224 aa13.27□□□□□ -0.29
SNCA-203ENST00000394986 TMEM136Q6ZRR5 245 aa13.27□□□□□ -0.29
SNCA-203ENST00000394986 ORMDL3Q8N138 153 aa13.27□□□□□ -0.29
SNCA-203ENST00000394986 PKHD1P08F94 4074 aa13.27□□□□□ -0.29
SNCA-203ENST00000394986 IGKV2D-24A0A075B6R9 120 aa13.26□□□□□ -0.29
SNCA-203ENST00000394986 TRAV9-1A0A075B6T8 112 aa13.26□□□□□ -0.29
SNCA-203ENST00000394986 A0A087WTM6 91 aa13.26□□□□□ -0.29
SNCA-203ENST00000394986 PPBPP02775 128 aa13.26□□□□□ -0.29
SNCA-203ENST00000394986 LINC00269Q8N2A0 174 aa13.26□□□□□ -0.29
SNCA-203ENST00000394986 SVBPQ8N300 66 aa13.26□□□□□ -0.29
SNCA-203ENST00000394986 PRELID3AQ96N28 172 aa13.26□□□□□ -0.29
SNCA-203ENST00000394986 C20orf78Q9BR46 151 aa13.26□□□□□ -0.29
SNCA-203ENST00000394986 ESDP10768 282 aa13.25□□□□□ -0.29
SNCA-203ENST00000394986 SPATA12Q7Z6I5 190 aa13.25□□□□□ -0.29
SNCA-203ENST00000394986 TM2D2Q9BX73 214 aa13.25□□□□□ -0.29
SNCA-203ENST00000394986 A0A1B0GUV1 79 aa13.24□□□□□ -0.29
SNCA-203ENST00000394986 SNAPINO95295 136 aa13.24□□□□□ -0.29
SNCA-203ENST00000394986 FCER1GP30273 86 aa13.24□□□□□ -0.29
SNCA-203ENST00000394986 FUSP35637 526 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNCA-203ENST00000394986 KRTAP10-2P60368 255 aa13.24□□□□□ -0.29
SNCA-203ENST00000394986 SMIM2Q9BVW6 85 aa13.24□□□□□ -0.29
SNCA-203ENST00000394986 LRCOL1A6NCL2 159 aa13.23□□□□□ -0.29
SNCA-203ENST00000394986 FGF6P10767 208 aa13.23□□□□□ -0.29
SNCA-203ENST00000394986 Q0VG73 95 aa13.23□□□□□ -0.29
SNCA-203ENST00000394986 AMMECR1LQ6DCA0 310 aa13.23□□□□□ -0.29
SNCA-203ENST00000394986 MAPKAPK5-AS1Q8N8E1 139 aa13.23□□□□□ -0.29
SNCA-203ENST00000394986 KIR2DL4Q99706 377 aa13.23□□□□□ -0.29
SNCA-203ENST00000394986 PRR34Q9NV39 138 aa13.23□□□□□ -0.29
SNCA-203ENST00000394986 DYNC1H1Q14204 4646 aaKnown RBP13.23□□□□□ -0.29
SNCA-203ENST00000394986 PHOX2AO14813 284 aa13.22□□□□□ -0.29
SNCA-203ENST00000394986 REG3AQ06141 175 aa13.22□□□□□ -0.29
SNCA-203ENST00000394986 WFDC2Q14508 124 aa13.22□□□□□ -0.29
SNCA-203ENST00000394986 RNASEKQ6P5S7 137 aaKnown RBP13.22□□□□□ -0.29
SNCA-203ENST00000394986 RMI2Q96E14 147 aa13.22□□□□□ -0.29
SNCA-203ENST00000394986 LECT2O14960 151 aa13.22□□□□□ -0.29
SNCA-203ENST00000394986 RPL32P62910 135 aaKnown RBP13.22□□□□□ -0.29
SNCA-203ENST00000394986 C1orf43Q9BWL3 253 aa13.22□□□□□ -0.29
SNCA-203ENST00000394986 H7C423 109 aa13.21□□□□□ -0.3
SNCA-203ENST00000394986 KIAA1644Q3SXP7 199 aa13.21□□□□□ -0.3
SNCA-203ENST00000394986 EREGO14944 169 aa13.2□□□□□ -0.3
SNCA-203ENST00000394986 TCAPO15273 167 aa13.2□□□□□ -0.3
SNCA-203ENST00000394986 MIAQ16674 131 aa13.2□□□□□ -0.3
SNCA-203ENST00000394986 IGLV10-54A0A075B6I4 117 aa13.19□□□□□ -0.3
SNCA-203ENST00000394986 TGIF2-C20orf24A0A0A6YYL0 155 aa13.19□□□□□ -0.3
SNCA-203ENST00000394986 IGKV3OR2-268A0A0C4DH90 116 aa13.19□□□□□ -0.3
SNCA-203ENST00000394986 LOC389332A0A1B0GUA5 103 aa13.19□□□□□ -0.3
SNCA-203ENST00000394986 BAALCQ8WXS3 180 aa13.19□□□□□ -0.3
SNCA-203ENST00000394986 COX11Q9Y6N1 276 aa13.19□□□□□ -0.3
SNCA-203ENST00000394986 HLA-DQA1P01909 254 aa13.18□□□□□ -0.3
SNCA-203ENST00000394986 LAMTOR2Q9Y2Q5 125 aa13.18□□□□□ -0.3
SNCA-203ENST00000394986 C16orf90A8MZG2 172 aa13.17□□□□□ -0.3
SNCA-203ENST00000394986 GNB1LQ9BYB4 327 aa13.17□□□□□ -0.3
SNCA-203ENST00000394986 MAP1LC3AQ9H492 121 aa13.17□□□□□ -0.3
SNCA-203ENST00000394986 ZNF25P17030 456 aaPredicted RBP13.16□□□□□ -0.3
SNCA-203ENST00000394986 MRPL52Q86TS9 123 aaKnown RBP13.16□□□□□ -0.3
SNCA-203ENST00000394986 OR5A1Q8NGJ0 315 aa13.16□□□□□ -0.3
SNCA-203ENST00000394986 TMEM101Q96IK0 257 aa13.16□□□□□ -0.3
SNCA-203ENST00000394986 RPL39P62891 51 aaKnown RBP13.15□□□□□ -0.3
SNCA-203ENST00000394986 KRTAP26-1Q6PEX3 210 aa13.15□□□□□ -0.3
SNCA-203ENST00000394986 Q8N814 137 aa13.15□□□□□ -0.3
SNCA-203ENST00000394986 DNAH5Q8TE73 4624 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms