RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SLPIP03973 132 aa5.72□□□□□ -1.49
ATG4A-205ENST00000394892 SMIM17P0DL12 118 aa5.72□□□□□ -1.49
ATG4A-205ENST00000394892 Q0VG73 95 aa5.72□□□□□ -1.49
ATG4A-205ENST00000394892 ELOBQ15370 118 aa5.72□□□□□ -1.49
ATG4A-205ENST00000394892 WDR73Q6P4I2 378 aa5.72□□□□□ -1.49
ATG4A-205ENST00000394892 RASL11AQ6T310 242 aa5.72□□□□□ -1.49
ATG4A-205ENST00000394892 AKAP14Q86UN6 197 aa5.72□□□□□ -1.49
ATG4A-205ENST00000394892 CIRBP-AS1Q8TBR5 109 aa5.72□□□□□ -1.49
ATG4A-205ENST00000394892 CHAC1Q9BUX1 264 aa5.72□□□□□ -1.49
ATG4A-205ENST00000394892 C1orf43Q9BWL3 253 aa5.72□□□□□ -1.49
ATG4A-205ENST00000394892 RPP21Q9H633 154 aaKnown RBP5.72□□□□□ -1.49
ATG4A-205ENST00000394892 IGHV1-24A0A0C4DH33 117 aa5.71□□□□□ -1.5
ATG4A-205ENST00000394892 TEX46H3BTG2 121 aa5.71□□□□□ -1.5
ATG4A-205ENST00000394892 RPL39LQ96EH5 51 aaKnown RBP5.71□□□□□ -1.5
ATG4A-205ENST00000394892 DPH3P1Q9H4G8 78 aa5.71□□□□□ -1.5
ATG4A-205ENST00000394892 NIT2Q9NQR4 276 aa5.71□□□□□ -1.5
ATG4A-205ENST00000394892 PLA2G2DQ9UNK4 145 aa5.71□□□□□ -1.5
ATG4A-205ENST00000394892 PKHD1L1Q86WI1 4243 aa5.71□□□□□ -1.5
ATG4A-205ENST00000394892 IGLV10-54A0A075B6I4 117 aa5.7□□□□□ -1.5
ATG4A-205ENST00000394892 TRBV25-1A0A075B6N4 114 aa5.7□□□□□ -1.5
ATG4A-205ENST00000394892 OXTP01178 125 aa5.7□□□□□ -1.5
ATG4A-205ENST00000394892 MIAQ16674 131 aa5.7□□□□□ -1.5
ATG4A-205ENST00000394892 TMEM97Q5BJF2 176 aa5.7□□□□□ -1.5
ATG4A-205ENST00000394892 A0A1B0GUV1 79 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 XKRY2A2RUG3 117 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 FAM231BA6NCW3 169 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 C9JQL5 133 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 TMEM250H0YL14 139 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 HLA-DQA1P01909 254 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 CRPP02741 224 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 TRGC1P0CF51 173 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 TAGLN2P37802 199 aaKnown RBP5.69□□□□□ -1.5
ATG4A-205ENST00000394892 BLOC1S1P78537 153 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 REG3AQ06141 175 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 TWIST1Q15672 202 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 KCNIP4Q6PIL6 250 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 SDIM1Q6ZPB5 146 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 FAM231DQ6ZW35 169 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 PGLYRP4Q96LB8 373 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 TMEM243Q9BU79 118 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 BIN3Q9NQY0 253 aa5.69□□□□□ -1.5
ATG4A-205ENST00000394892 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.69□□□□□ -1.5
ATG4A-205ENST00000394892 H7C1H1 209 aa5.68□□□□□ -1.5
ATG4A-205ENST00000394892 GATCO43716 136 aaKnown RBP5.68□□□□□ -1.5
ATG4A-205ENST00000394892 SRP19P09132 144 aaKnown RBP5.68□□□□□ -1.5
ATG4A-205ENST00000394892 HNRNPA3P51991 378 aaKnown RBP5.68□□□□□ -1.5
ATG4A-205ENST00000394892 C9orf163Q8N9P6 203 aa5.68□□□□□ -1.5
ATG4A-205ENST00000394892 RNF185Q96GF1 192 aa5.68□□□□□ -1.5
ATG4A-205ENST00000394892 HMCN2Q8NDA2 5059 aa5.68□□□□□ -1.5
ATG4A-205ENST00000394892 PKIAP61925 76 aa5.67□□□□□ -1.5
ATG4A-205ENST00000394892 LINC01551Q86U37 167 aa5.67□□□□□ -1.5
ATG4A-205ENST00000394892 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-205ENST00000394892 IGKV2-29A2NJV5 120 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-205ENST00000394892 RPS10P46783 165 aaKnown RBP5.66□□□□□ -1.5
ATG4A-205ENST00000394892 AMTP48728 403 aa5.66□□□□□ -1.5
ATG4A-205ENST00000394892 CEBPGP53567 150 aa5.66□□□□□ -1.5
ATG4A-205ENST00000394892 SRSF3P84103 164 aaKnown RBP5.66□□□□□ -1.5
ATG4A-205ENST00000394892 COTL1Q14019 142 aa5.66□□□□□ -1.5
ATG4A-205ENST00000394892 C14orf177Q52M58 125 aa5.66□□□□□ -1.5
ATG4A-205ENST00000394892 C15orf56Q8N910 161 aa5.66□□□□□ -1.5
ATG4A-205ENST00000394892 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.66□□□□□ -1.5
ATG4A-205ENST00000394892 V9GYV3 84 aa5.66□□□□□ -1.5
ATG4A-205ENST00000394892 TRBV6-5A0A0K0K1A5 114 aa5.65□□□□□ -1.5
ATG4A-205ENST00000394892 SDHAF1A6NFY7 115 aa5.65□□□□□ -1.5
ATG4A-205ENST00000394892 A8MWL6 223 aa5.65□□□□□ -1.5
ATG4A-205ENST00000394892 NDUFS6O75380 124 aaKnown RBP5.65□□□□□ -1.5
ATG4A-205ENST00000394892 TSHBP01222 138 aa5.65□□□□□ -1.5
ATG4A-205ENST00000394892 ESDP10768 282 aa5.65□□□□□ -1.5
ATG4A-205ENST00000394892 CNBPP62633 177 aaKnown RBP5.65□□□□□ -1.5
ATG4A-205ENST00000394892 CIRBPQ14011 172 aaKnown RBP5.65□□□□□ -1.5
ATG4A-205ENST00000394892 CT83Q5H943 113 aa5.65□□□□□ -1.5
ATG4A-205ENST00000394892 DGAT2L7PQ6IED9 249 aa5.65□□□□□ -1.5
ATG4A-205ENST00000394892 SMIM7Q9BQ49 75 aa5.65□□□□□ -1.5
ATG4A-205ENST00000394892 TRAV8-4A0A0B4J246 113 aa5.64□□□□□ -1.51
ATG4A-205ENST00000394892 GAGE12HA6NDE8 117 aa5.64□□□□□ -1.51
ATG4A-205ENST00000394892 HIGD1CA8MV81 97 aa5.64□□□□□ -1.51
ATG4A-205ENST00000394892 SMKR1H3BMG3 65 aa5.64□□□□□ -1.51
ATG4A-205ENST00000394892 CHTF8P0CG12 524 aa5.64□□□□□ -1.51
ATG4A-205ENST00000394892 RAB4AP20338 218 aa5.64□□□□□ -1.51
ATG4A-205ENST00000394892 POLR2KP53803 58 aaKnown RBP5.64□□□□□ -1.51
ATG4A-205ENST00000394892 TSKUQ8WUA8 353 aa5.64□□□□□ -1.51
ATG4A-205ENST00000394892 EIF5A2Q9GZV4 153 aaKnown RBP5.64□□□□□ -1.51
ATG4A-205ENST00000394892 OSTCQ9NRP0 149 aa5.64□□□□□ -1.51
ATG4A-205ENST00000394892 hDV102S1A0JD36 115 aa5.63□□□□□ -1.51
ATG4A-205ENST00000394892 ZNF727A8MUV8 499 aa5.63□□□□□ -1.51
ATG4A-205ENST00000394892 FGF6P10767 208 aa5.63□□□□□ -1.51
ATG4A-205ENST00000394892 RPL23P62829 140 aaKnown RBP5.63□□□□□ -1.51
ATG4A-205ENST00000394892 AMN1Q8IY45 258 aa5.63□□□□□ -1.51
ATG4A-205ENST00000394892 NUP35Q8NFH5 326 aa5.63□□□□□ -1.51
ATG4A-205ENST00000394892 ISOC2Q96AB3 205 aa5.63□□□□□ -1.51
ATG4A-205ENST00000394892 TMEM191AQ9H0A3 160 aa5.63□□□□□ -1.51
ATG4A-205ENST00000394892 TMEM242Q9NWH2 141 aa5.63□□□□□ -1.51
ATG4A-205ENST00000394892 IGKV3OR2-268A0A0C4DH90 116 aa5.62□□□□□ -1.51
ATG4A-205ENST00000394892 A0A1B0GUT8 65 aa5.62□□□□□ -1.51
ATG4A-205ENST00000394892 NCR2O95944 276 aa5.62□□□□□ -1.51
ATG4A-205ENST00000394892 RPL37AP61513 92 aaKnown RBP5.62□□□□□ -1.51
ATG4A-205ENST00000394892 FOXI1Q12951 378 aa5.62□□□□□ -1.51
ATG4A-205ENST00000394892 ANKRD39Q53RE8 183 aa5.62□□□□□ -1.51
ATG4A-205ENST00000394892 NRACQ8N912 160 aa5.62□□□□□ -1.51
ATG4A-205ENST00000394892 CLRN3Q8NCR9 226 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms