RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 GCN1Q92616 2671 aaKnown RBP8.71□□□□□ -1.02
UBE2D3-209ENST00000394804 IGIPA6NJ69 53 aa8.7□□□□□ -1.02
UBE2D3-209ENST00000394804 IGHV3-30-3P0DP02 117 aa8.7□□□□□ -1.02
UBE2D3-209ENST00000394804 CENPEQ02224 2701 aa8.7□□□□□ -1.02
UBE2D3-209ENST00000394804 UTP20O75691 2785 aaKnown RBP8.7□□□□□ -1.02
UBE2D3-209ENST00000394804 IGLV1-40P01703 118 aa8.7□□□□□ -1.02
UBE2D3-209ENST00000394804 ZNF22P17026 224 aaPredicted RBP8.7□□□□□ -1.02
UBE2D3-209ENST00000394804 Q6ZS46 218 aa8.7□□□□□ -1.02
UBE2D3-209ENST00000394804 CRYBA4P53673 196 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 HERVK_113P63121 156 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 DCANP1Q8TF63 244 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 DNAJC30Q96LL9 226 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 TMEM223A0PJW6 202 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 CFAP126Q5VTH2 177 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 RNF152Q8N8N0 203 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 IGLV4-3A0A075B6K6 122 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 A0A0B4J2C4 111 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 CMC4P56277 68 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 CHCHD5Q9BSY4 110 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 USP9YO00507 2555 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 GAGE12JA6NER3 117 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 IGHV3-30P01768 117 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 CRPP02741 224 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 IGHV3-30-5P0DP03 117 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 IFITM1P13164 125 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 GAGE4Q13068 117 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 GAGE5Q13069 117 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 CARD19Q96LW7 228 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 C9orf85Q96MD7 179 aa8.69□□□□□ -1.02
UBE2D3-209ENST00000394804 IGHV1-58A0A0C4DH39 117 aa8.68□□□□□ -1.02
UBE2D3-209ENST00000394804 NRGNQ92686 78 aa8.68□□□□□ -1.02
UBE2D3-209ENST00000394804 A0A0J9YXY3 114 aa8.68□□□□□ -1.02
UBE2D3-209ENST00000394804 PSMB8P28062 276 aa8.68□□□□□ -1.02
UBE2D3-209ENST00000394804 UBE2D1P51668 147 aa8.68□□□□□ -1.02
UBE2D3-209ENST00000394804 NFE4Q86UQ8 179 aa8.68□□□□□ -1.02
UBE2D3-209ENST00000394804 LINC00158P58513 81 aa8.68□□□□□ -1.02
UBE2D3-209ENST00000394804 SPATA25Q9BR10 227 aa8.68□□□□□ -1.02
UBE2D3-209ENST00000394804 ICOSQ9Y6W8 199 aa8.68□□□□□ -1.02
UBE2D3-209ENST00000394804 BRI3O95415 125 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 CRYGDP07320 174 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 P0DMU3 169 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 FAM231AP0DMU4 169 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 FAM231CP0DMU5 169 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 DOPEY1Q5JWR5 2465 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 NXPH4O95158 308 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 CEMP1Q6PRD7 247 aaPredicted RBP8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 C10orf99Q6UWK7 81 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 APRG1Q8IVJ8 170 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 HECTD1Q9ULT8 2610 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 IGLV4-69A0A075B6H9 119 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 INSL3P51460 131 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 Q9H8V8 135 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 NAV2Q8IVL1 2488 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 TENM4Q6N022 2769 aa8.67□□□□□ -1.02
UBE2D3-209ENST00000394804 TSHBP01222 138 aa8.66□□□□□ -1.02
UBE2D3-209ENST00000394804 TMEM61Q8N0U2 210 aa8.66□□□□□ -1.02
UBE2D3-209ENST00000394804 IGHV3-33P01772 117 aa8.66□□□□□ -1.02
UBE2D3-209ENST00000394804 Q6ZUT4 128 aa8.66□□□□□ -1.02
UBE2D3-209ENST00000394804 KLK9Q2XQG4 91 aa8.65□□□□□ -1.02
UBE2D3-209ENST00000394804 FLNBO75369 2602 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-209ENST00000394804 RBMY1BA6NDE4 496 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-209ENST00000394804 RBMY1EA6NEQ0 496 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-209ENST00000394804 RBMY1DP0C7P1 496 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-209ENST00000394804 RBMY1A1P0DJD3 496 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-209ENST00000394804 RBMY1CP0DJD4 496 aa8.65□□□□□ -1.02
UBE2D3-209ENST00000394804 TMEM243Q9BU79 118 aa8.65□□□□□ -1.02
UBE2D3-209ENST00000394804 TRBV10-2A0A0K0K1G8 114 aa8.65□□□□□ -1.02
UBE2D3-209ENST00000394804 RPL35AP18077 110 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-209ENST00000394804 EDN2P20800 178 aa8.65□□□□□ -1.02
UBE2D3-209ENST00000394804 C15orf53Q8NAA6 179 aa8.65□□□□□ -1.03
UBE2D3-209ENST00000394804 NOTCH2Q04721 2471 aa8.64□□□□□ -1.03
UBE2D3-209ENST00000394804 CRYBG3Q68DQ2 2970 aa8.64□□□□□ -1.03
UBE2D3-209ENST00000394804 UBR5O95071 2799 aaPredicted RBP8.64□□□□□ -1.03
UBE2D3-209ENST00000394804 MT-ATP8P03928 68 aa8.64□□□□□ -1.03
UBE2D3-209ENST00000394804 MIAQ16674 131 aa8.64□□□□□ -1.03
UBE2D3-209ENST00000394804 PYGO1Q9Y3Y4 419 aa8.64□□□□□ -1.03
UBE2D3-209ENST00000394804 TINCRA0A1B0GVN0 87 aa8.63□□□□□ -1.03
UBE2D3-209ENST00000394804 VSIG2Q96IQ7 327 aa8.63□□□□□ -1.03
UBE2D3-209ENST00000394804 KIF25-AS1Q9Y6Z4 181 aa8.63□□□□□ -1.03
UBE2D3-209ENST00000394804 PF4P02776 101 aa8.63□□□□□ -1.03
UBE2D3-209ENST00000394804 H3BT86 120 aa8.63□□□□□ -1.03
UBE2D3-209ENST00000394804 TSPEAR-AS2P59090 65 aa8.63□□□□□ -1.03
UBE2D3-209ENST00000394804 HIST2H2BCQ6DN03 193 aa8.63□□□□□ -1.03
UBE2D3-209ENST00000394804 DAND5Q8N907 189 aa8.63□□□□□ -1.03
UBE2D3-209ENST00000394804 Q96MF0 132 aa8.63□□□□□ -1.03
UBE2D3-209ENST00000394804 CFHR3Q02985 330 aa8.62□□□□□ -1.03
UBE2D3-209ENST00000394804 PAX4O43316 350 aa8.62□□□□□ -1.03
UBE2D3-209ENST00000394804 GAGE7O76087 117 aa8.62□□□□□ -1.03
UBE2D3-209ENST00000394804 GAGE12FP0CL80 117 aa8.62□□□□□ -1.03
UBE2D3-209ENST00000394804 GAGE12GP0CL81 117 aa8.62□□□□□ -1.03
UBE2D3-209ENST00000394804 GAGE12IP0CL82 117 aa8.62□□□□□ -1.03
UBE2D3-209ENST00000394804 UBE2D3P61077 147 aa8.62□□□□□ -1.03
UBE2D3-209ENST00000394804 UBE2D2P62837 147 aa8.62□□□□□ -1.03
UBE2D3-209ENST00000394804 OVOL2Q9BRP0 275 aa8.62□□□□□ -1.03
UBE2D3-209ENST00000394804 MAP6D1Q9H9H5 199 aa8.62□□□□□ -1.03
UBE2D3-209ENST00000394804 AVPP01185 164 aa8.61□□□□□ -1.03
UBE2D3-209ENST00000394804 PROK1P58294 105 aa8.61□□□□□ -1.03
UBE2D3-209ENST00000394804 TMEM86BQ8N661 226 aa8.61□□□□□ -1.03
UBE2D3-209ENST00000394804 FAM19A4Q96LR4 140 aa8.61□□□□□ -1.03
UBE2D3-209ENST00000394804 HERV-K104P63124 156 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms