RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 C11orf44Q8N8P7 122 aa11.16□□□□□ -0.62
UBE2D3-207ENST00000394801 ZNRF2Q8NHG8 242 aa11.16□□□□□ -0.62
UBE2D3-207ENST00000394801 GTSF1LQ9H1H1 148 aa11.16□□□□□ -0.62
UBE2D3-207ENST00000394801 TSSC4Q9Y5U2 329 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-207ENST00000394801 CUBNO60494 3623 aa11.16□□□□□ -0.62
UBE2D3-207ENST00000394801 PROK1P58294 105 aa11.15□□□□□ -0.62
UBE2D3-207ENST00000394801 HERVK_113P61574 105 aa11.15□□□□□ -0.62
UBE2D3-207ENST00000394801 CFAP126Q5VTH2 177 aa11.15□□□□□ -0.62
UBE2D3-207ENST00000394801 HIST1H4GQ99525 98 aa11.15□□□□□ -0.62
UBE2D3-207ENST00000394801 YAE1D1Q9NRH1 226 aa11.15□□□□□ -0.62
UBE2D3-207ENST00000394801 CITED2Q99967 270 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-207ENST00000394801 SPATA25Q9BR10 227 aa11.14□□□□□ -0.63
UBE2D3-207ENST00000394801 NACAE9PAV3 2078 aa11.14□□□□□ -0.63
UBE2D3-207ENST00000394801 A0A1B0GWB2 263 aa11.14□□□□□ -0.63
UBE2D3-207ENST00000394801 A0A1W2PRX2 142 aa11.14□□□□□ -0.63
UBE2D3-207ENST00000394801 EMP1P54849 157 aa11.14□□□□□ -0.63
UBE2D3-207ENST00000394801 PYGO1Q9Y3Y4 419 aa11.14□□□□□ -0.63
UBE2D3-207ENST00000394801 IGHV3-73A0A0B4J1V6 119 aa11.13□□□□□ -0.63
UBE2D3-207ENST00000394801 ZNF815PA8K554 130 aa11.13□□□□□ -0.63
UBE2D3-207ENST00000394801 RHODO00212 210 aa11.13□□□□□ -0.63
UBE2D3-207ENST00000394801 RRN3P1Q2M238 152 aa11.13□□□□□ -0.63
UBE2D3-207ENST00000394801 ACANP16112 2415 aa11.12□□□□□ -0.63
UBE2D3-207ENST00000394801 H3BMG7 143 aa11.12□□□□□ -0.63
UBE2D3-207ENST00000394801 SMAGPQ0VAQ4 97 aa11.12□□□□□ -0.63
UBE2D3-207ENST00000394801 GAGE13Q4V321 117 aa11.12□□□□□ -0.63
UBE2D3-207ENST00000394801 Q6ZSN1 163 aa11.12□□□□□ -0.63
UBE2D3-207ENST00000394801 STHQ8IWL8 128 aa11.12□□□□□ -0.63
UBE2D3-207ENST00000394801 OPRPNQ99935 248 aaPredicted RBP11.12□□□□□ -0.63
UBE2D3-207ENST00000394801 TNFRSF18Q9Y5U5 241 aa11.12□□□□□ -0.63
UBE2D3-207ENST00000394801 IGLV4-3A0A075B6K6 122 aa11.12□□□□□ -0.63
UBE2D3-207ENST00000394801 IGHV3-53P01767 116 aa11.12□□□□□ -0.63
UBE2D3-207ENST00000394801 SCGB2A2Q13296 93 aa11.12□□□□□ -0.63
UBE2D3-207ENST00000394801 RS1O15537 224 aa11.11□□□□□ -0.63
UBE2D3-207ENST00000394801 CRYBA4P53673 196 aa11.11□□□□□ -0.63
UBE2D3-207ENST00000394801 C1orf158Q8N1D5 194 aa11.11□□□□□ -0.63
UBE2D3-207ENST00000394801 XCL2Q9UBD3 114 aa11.11□□□□□ -0.63
UBE2D3-207ENST00000394801 PRO0461Q9UI25 63 aa11.11□□□□□ -0.63
UBE2D3-207ENST00000394801 ETDBQ3ZM63 59 aa11.11□□□□□ -0.63
UBE2D3-207ENST00000394801 TMEM170BQ5T4T1 132 aa11.11□□□□□ -0.63
UBE2D3-207ENST00000394801 DNAJC30Q96LL9 226 aa11.11□□□□□ -0.63
UBE2D3-207ENST00000394801 SH2D6Q7Z4S9 175 aa11.1□□□□□ -0.63
UBE2D3-207ENST00000394801 FAM104AQ969W3 186 aa11.1□□□□□ -0.63
UBE2D3-207ENST00000394801 VCX2Q9H322 139 aa11.1□□□□□ -0.63
UBE2D3-207ENST00000394801 Q9UF83 564 aa11.1□□□□□ -0.63
UBE2D3-207ENST00000394801 WNK1Q9H4A3 2382 aa11.1□□□□□ -0.63
UBE2D3-207ENST00000394801 IL17DQ8TAD2 202 aa11.1□□□□□ -0.63
UBE2D3-207ENST00000394801 PLEKHB2Q96CS7 222 aa11.1□□□□□ -0.63
UBE2D3-207ENST00000394801 A0A1B0GV72 72 aa11.09□□□□□ -0.63
UBE2D3-207ENST00000394801 CMC4P56277 68 aaPredicted RBP11.09□□□□□ -0.63
UBE2D3-207ENST00000394801 SCGB1D4Q6XE38 83 aa11.09□□□□□ -0.63
UBE2D3-207ENST00000394801 AMELXQ99217 191 aa11.09□□□□□ -0.63
UBE2D3-207ENST00000394801 MRPL16Q9NX20 251 aaKnown RBP11.09□□□□□ -0.63
UBE2D3-207ENST00000394801 A0A0J9YY99 117 aa11.08□□□□□ -0.64
UBE2D3-207ENST00000394801 TMEM223A0PJW6 202 aa11.08□□□□□ -0.64
UBE2D3-207ENST00000394801 TSPEAR-AS2P59090 65 aa11.08□□□□□ -0.64
UBE2D3-207ENST00000394801 HILS1P60008 231 aa11.08□□□□□ -0.64
UBE2D3-207ENST00000394801 MTORP42345 2549 aa11.08□□□□□ -0.64
UBE2D3-207ENST00000394801 NIPBLQ6KC79 2804 aaeCLIP11.08□□□□□ -0.64
UBE2D3-207ENST00000394801 ZNF418Q8TF45 676 aaPredicted RBP11.08□□□□□ -0.64
UBE2D3-207ENST00000394801 FAM110AQ9BQ89 295 aa11.08□□□□□ -0.64
UBE2D3-207ENST00000394801 CHCHD7Q9BUK0 85 aa11.08□□□□□ -0.64
UBE2D3-207ENST00000394801 SETD2Q9BYW2 2564 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-207ENST00000394801 J3QQQ9 107 aa11.07□□□□□ -0.64
UBE2D3-207ENST00000394801 ZNF22P17026 224 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-207ENST00000394801 LEPROTO15243 131 aa11.06□□□□□ -0.64
UBE2D3-207ENST00000394801 NDUFA7O95182 113 aa11.06□□□□□ -0.64
UBE2D3-207ENST00000394801 A0A0J9YXV3 536 aa11.05□□□□□ -0.64
UBE2D3-207ENST00000394801 ADARB2-AS1A8MUL3 147 aa11.05□□□□□ -0.64
UBE2D3-207ENST00000394801 IGLV1-51P01701 117 aa11.05□□□□□ -0.64
UBE2D3-207ENST00000394801 MRPS36P82909 103 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-207ENST00000394801 SLC25A29Q8N8R3 303 aa11.05□□□□□ -0.64
UBE2D3-207ENST00000394801 TMEM238LA0A1B0GVL6 79 aa11.05□□□□□ -0.64
UBE2D3-207ENST00000394801 A6NJY4 79 aa11.05□□□□□ -0.64
UBE2D3-207ENST00000394801 SRSF9Q13242 221 aaKnown RBP eCLIP11.05□□□□□ -0.64
UBE2D3-207ENST00000394801 ATP6V0E2Q8NHE4 81 aa11.05□□□□□ -0.64
UBE2D3-207ENST00000394801 SPANXA1Q9NS26 97 aa11.05□□□□□ -0.64
UBE2D3-207ENST00000394801 UBE2D1P51668 147 aa11.04□□□□□ -0.64
UBE2D3-207ENST00000394801 UBE2D4Q9Y2X8 147 aa11.04□□□□□ -0.64
UBE2D3-207ENST00000394801 GIG44P09565 113 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-207ENST00000394801 TMEM263Q8WUH6 116 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-207ENST00000394801 C19orf73Q9NVV2 129 aa11.04□□□□□ -0.64
UBE2D3-207ENST00000394801 IGHV3OR16-12A0A075B7B8 117 aa11.03□□□□□ -0.64
UBE2D3-207ENST00000394801 LGALS3P17931 250 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-207ENST00000394801 APOMO95445 188 aa11.03□□□□□ -0.64
UBE2D3-207ENST00000394801 INSL3P51460 131 aa11.03□□□□□ -0.64
UBE2D3-207ENST00000394801 PGPEP1Q9NXJ5 209 aa11.03□□□□□ -0.64
UBE2D3-207ENST00000394801 CEMP1Q6PRD7 247 aaPredicted RBP11.02□□□□□ -0.65
UBE2D3-207ENST00000394801 C1QTNF4Q9BXJ3 329 aa11.02□□□□□ -0.65
UBE2D3-207ENST00000394801 TRGV1A0A0A0MS02 117 aa11.02□□□□□ -0.65
UBE2D3-207ENST00000394801 IGHV3-30P01768 117 aa11.02□□□□□ -0.65
UBE2D3-207ENST00000394801 IGHV3-30-5P0DP03 117 aa11.02□□□□□ -0.65
UBE2D3-207ENST00000394801 FOXI1Q12951 378 aa11.02□□□□□ -0.65
UBE2D3-207ENST00000394801 MTURNQ8N3F0 131 aa11.02□□□□□ -0.65
UBE2D3-207ENST00000394801 DAZ2Q13117 558 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-207ENST00000394801 TEP1Q99973 2627 aaKnown RBP11□□□□□ -0.65
UBE2D3-207ENST00000394801 IGHV3-38A0A0C4DH36 116 aa11□□□□□ -0.65
UBE2D3-207ENST00000394801 TRBV10-1A0A0K0K1A3 114 aa11□□□□□ -0.65
UBE2D3-207ENST00000394801 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-207ENST00000394801 TRAV4A0A0B4J268 109 aa10.99□□□□□ -0.65
UBE2D3-207ENST00000394801 TINCRA0A1B0GVN0 87 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms