RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 UBE2D4Q9Y2X8 147 aa9.24□□□□□ -0.93
SLC28A1-203ENST00000394573 ZFHX3Q15911 3703 aa9.24□□□□□ -0.93
SLC28A1-203ENST00000394573 TMEM30BQ3MIR4 351 aa9.24□□□□□ -0.93
SLC28A1-203ENST00000394573 Q6JHZ5 121 aa9.24□□□□□ -0.93
SLC28A1-203ENST00000394573 FAM19A1Q7Z5A9 133 aa9.24□□□□□ -0.93
SLC28A1-203ENST00000394573 CACNA1HO95180 2353 aa9.23□□□□□ -0.93
SLC28A1-203ENST00000394573 CTSGP08311 255 aa9.23□□□□□ -0.93
SLC28A1-203ENST00000394573 PSMB8P28062 276 aa9.23□□□□□ -0.93
SLC28A1-203ENST00000394573 H7BZZ5 65 aa9.23□□□□□ -0.93
SLC28A1-203ENST00000394573 KNCNA6PVL3 124 aa9.22□□□□□ -0.93
SLC28A1-203ENST00000394573 IGHG2P01859 326 aa9.22□□□□□ -0.93
SLC28A1-203ENST00000394573 IGHV1-8P0DP01 117 aa9.22□□□□□ -0.93
SLC28A1-203ENST00000394573 RNASE4P34096 147 aaKnown RBP9.22□□□□□ -0.93
SLC28A1-203ENST00000394573 IGLV1-44P01699 117 aa9.22□□□□□ -0.93
SLC28A1-203ENST00000394573 LINC00315P59091 139 aa9.22□□□□□ -0.93
SLC28A1-203ENST00000394573 RBM3P98179 157 aaKnown RBP9.22□□□□□ -0.93
SLC28A1-203ENST00000394573 CCL17Q92583 94 aa9.22□□□□□ -0.93
SLC28A1-203ENST00000394573 IGLV4-3A0A075B6K6 122 aa9.21□□□□□ -0.93
SLC28A1-203ENST00000394573 SMIM26A0A096LP01 95 aa9.21□□□□□ -0.93
SLC28A1-203ENST00000394573 BPESC1Q9GZL8 116 aa9.21□□□□□ -0.93
SLC28A1-203ENST00000394573 ZNF576Q9H609 170 aa9.21□□□□□ -0.93
SLC28A1-203ENST00000394573 RETNQ9HD89 108 aa9.21□□□□□ -0.93
SLC28A1-203ENST00000394573 EPM2AB3EWF7 344 aa9.21□□□□□ -0.94
SLC28A1-203ENST00000394573 NCR3O14931 201 aa9.21□□□□□ -0.94
SLC28A1-203ENST00000394573 RNASE3P12724 160 aaKnown RBP9.21□□□□□ -0.94
SLC28A1-203ENST00000394573 SOSTDC1Q6X4U4 206 aa9.21□□□□□ -0.94
SLC28A1-203ENST00000394573 TRBV27A0A0K0K1C4 114 aa9.2□□□□□ -0.94
SLC28A1-203ENST00000394573 SLC25A15Q9Y619 301 aa9.2□□□□□ -0.94
SLC28A1-203ENST00000394573 SORL1Q92673 2214 aa9.2□□□□□ -0.94
SLC28A1-203ENST00000394573 DOPEY2Q9Y3R5 2298 aa9.2□□□□□ -0.94
SLC28A1-203ENST00000394573 ASH1LQ9NR48 2969 aaKnown RBP9.2□□□□□ -0.94
SLC28A1-203ENST00000394573 PTPRZ1P23471 2315 aaPredicted RBP9.2□□□□□ -0.94
SLC28A1-203ENST00000394573 IGHV1-58A0A0C4DH39 117 aa9.2□□□□□ -0.94
SLC28A1-203ENST00000394573 PPP1R17O96001 155 aa9.2□□□□□ -0.94
SLC28A1-203ENST00000394573 C9orf106Q8NAJ2 232 aa9.2□□□□□ -0.94
SLC28A1-203ENST00000394573 RMI2Q96E14 147 aa9.2□□□□□ -0.94
SLC28A1-203ENST00000394573 NDUFC2-KCTD14E9PQ53 114 aa9.19□□□□□ -0.94
SLC28A1-203ENST00000394573 NDUFB3O43676 98 aa9.19□□□□□ -0.94
SLC28A1-203ENST00000394573 CD28P10747 220 aa9.19□□□□□ -0.94
SLC28A1-203ENST00000394573 ENHOQ6UWT2 76 aa9.19□□□□□ -0.94
SLC28A1-203ENST00000394573 IGLV11-55A0A075B6I3 123 aa9.19□□□□□ -0.94
SLC28A1-203ENST00000394573 F6UB75 175 aa9.19□□□□□ -0.94
SLC28A1-203ENST00000394573 TIMM17BO60830 172 aa9.19□□□□□ -0.94
SLC28A1-203ENST00000394573 S100A7L2Q5SY68 101 aa9.19□□□□□ -0.94
SLC28A1-203ENST00000394573 DKK4Q9UBT3 224 aa9.18□□□□□ -0.94
SLC28A1-203ENST00000394573 KIF25-AS1Q9Y6Z4 181 aa9.18□□□□□ -0.94
SLC28A1-203ENST00000394573 IGKV3-7A0A075B6H7 116 aa9.18□□□□□ -0.94
SLC28A1-203ENST00000394573 IGHV1-69P01742 117 aa9.18□□□□□ -0.94
SLC28A1-203ENST00000394573 LINC00308Q8TCZ7 52 aa9.18□□□□□ -0.94
SLC28A1-203ENST00000394573 C20orf173Q96LM9 149 aa9.18□□□□□ -0.94
SLC28A1-203ENST00000394573 VSIG2Q96IQ7 327 aa9.18□□□□□ -0.94
SLC28A1-203ENST00000394573 F8WEM9 126 aa9.17□□□□□ -0.94
SLC28A1-203ENST00000394573 NBR2O15453 112 aa9.17□□□□□ -0.94
SLC28A1-203ENST00000394573 ZFAND2AQ8N6M9 145 aa9.17□□□□□ -0.94
SLC28A1-203ENST00000394573 KLK9Q9UKQ9 250 aa9.17□□□□□ -0.94
SLC28A1-203ENST00000394573 TRBV7-6A0A0J9YX20 115 aa9.17□□□□□ -0.94
SLC28A1-203ENST00000394573 IGHV4OR15-8A0A075B7B6 117 aa9.16□□□□□ -0.94
SLC28A1-203ENST00000394573 A0A087WW49 117 aa9.16□□□□□ -0.94
SLC28A1-203ENST00000394573 A0A087WYN8 130 aa9.16□□□□□ -0.94
SLC28A1-203ENST00000394573 TRAV21A0A0B4J279 112 aa9.16□□□□□ -0.94
SLC28A1-203ENST00000394573 SLPIP03973 132 aa9.16□□□□□ -0.94
SLC28A1-203ENST00000394573 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
SLC28A1-203ENST00000394573 LRBAP50851 2863 aa9.15□□□□□ -0.94
SLC28A1-203ENST00000394573 CCKP06307 115 aa9.15□□□□□ -0.94
SLC28A1-203ENST00000394573 FAM229BQ4G0N7 80 aa9.15□□□□□ -0.94
SLC28A1-203ENST00000394573 FAM222AQ5U5X8 452 aa9.15□□□□□ -0.94
SLC28A1-203ENST00000394573 PRB1P04280 392 aa9.15□□□□□ -0.95
SLC28A1-203ENST00000394573 PIK3CD-AS1Q5SR53 167 aa9.14□□□□□ -0.95
SLC28A1-203ENST00000394573 DCHS2Q6V1P9 2916 aa9.14□□□□□ -0.95
SLC28A1-203ENST00000394573 SPTA1P02549 2419 aa9.14□□□□□ -0.95
SLC28A1-203ENST00000394573 SPTBN2O15020 2390 aa9.14□□□□□ -0.95
SLC28A1-203ENST00000394573 IGLV1-47P01700 117 aa9.13□□□□□ -0.95
SLC28A1-203ENST00000394573 C22orf34Q6ZV56 151 aa9.13□□□□□ -0.95
SLC28A1-203ENST00000394573 Q9H8V8 135 aa9.13□□□□□ -0.95
SLC28A1-203ENST00000394573 IGLV3-9A0A075B6K5 115 aa9.13□□□□□ -0.95
SLC28A1-203ENST00000394573 CACNA1GO43497 2377 aa9.13□□□□□ -0.95
SLC28A1-203ENST00000394573 AKAP6Q13023 2319 aa9.13□□□□□ -0.95
SLC28A1-203ENST00000394573 COL12A1Q99715 3063 aa9.13□□□□□ -0.95
SLC28A1-203ENST00000394573 SNRPD3P62318 126 aaKnown RBP9.12□□□□□ -0.95
SLC28A1-203ENST00000394573 ATP1A1-AS1Q5TC04 95 aa9.12□□□□□ -0.95
SLC28A1-203ENST00000394573 LY6G5BQ8NDX9 201 aa9.12□□□□□ -0.95
SLC28A1-203ENST00000394573 FAM104AQ969W3 186 aa9.12□□□□□ -0.95
SLC28A1-203ENST00000394573 CLEC19AQ6UXS0 136 aa9.12□□□□□ -0.95
SLC28A1-203ENST00000394573 MRPS36P82909 103 aaKnown RBP9.12□□□□□ -0.95
SLC28A1-203ENST00000394573 TMEM105Q8N8V8 129 aa9.12□□□□□ -0.95
SLC28A1-203ENST00000394573 CDKN2A-AS1Q9UH64 79 aa9.12□□□□□ -0.95
SLC28A1-203ENST00000394573 IGHV3-73A0A0B4J1V6 119 aa9.11□□□□□ -0.95
SLC28A1-203ENST00000394573 PMAIP1Q13794 54 aa9.11□□□□□ -0.95
SLC28A1-203ENST00000394573 C15orf32Q32M92 178 aa9.11□□□□□ -0.95
SLC28A1-203ENST00000394573 IGFL2Q6UWQ7 119 aa9.11□□□□□ -0.95
SLC28A1-203ENST00000394573 Q96MF0 132 aa9.11□□□□□ -0.95
SLC28A1-203ENST00000394573 AKAP13Q12802 2813 aa9.1□□□□□ -0.95
SLC28A1-203ENST00000394573 TRIOBPQ9H2D6 2365 aa9.1□□□□□ -0.95
SLC28A1-203ENST00000394573 MUC3AQ02505 3323 aa9.09□□□□□ -0.95
SLC28A1-203ENST00000394573 M0QY20 66 aa9.09□□□□□ -0.95
SLC28A1-203ENST00000394573 SOCS3O14543 225 aa9.09□□□□□ -0.95
SLC28A1-203ENST00000394573 CUBNO60494 3623 aa9.09□□□□□ -0.95
SLC28A1-203ENST00000394573 LECT2O14960 151 aa9.09□□□□□ -0.95
SLC28A1-203ENST00000394573 ECSCRQ19T08 205 aa9.09□□□□□ -0.95
SLC28A1-203ENST00000394573 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms