RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 PSMB2P49721 201 aa9.85□□□□□ -0.83
GTF2F1-201ENST00000394456 SAMD13Q5VXD3 122 aa9.85□□□□□ -0.83
GTF2F1-201ENST00000394456 TMEM61Q8N0U2 210 aa9.85□□□□□ -0.83
GTF2F1-201ENST00000394456 C20orf203Q8NBC4 194 aa9.85□□□□□ -0.83
GTF2F1-201ENST00000394456 C2CD3Q4AC94 2353 aa9.85□□□□□ -0.83
GTF2F1-201ENST00000394456 IGLV4-3A0A075B6K6 122 aa9.84□□□□□ -0.83
GTF2F1-201ENST00000394456 IGHV3-30P01768 117 aa9.84□□□□□ -0.83
GTF2F1-201ENST00000394456 IGHV3-30-5P0DP03 117 aa9.84□□□□□ -0.83
GTF2F1-201ENST00000394456 TRPT1Q86TN4 253 aaKnown RBP9.84□□□□□ -0.83
GTF2F1-201ENST00000394456 ODF3Q96PU9 254 aa9.84□□□□□ -0.83
GTF2F1-201ENST00000394456 A8MZ25 164 aa9.84□□□□□ -0.83
GTF2F1-201ENST00000394456 CFC1BP0CG36 223 aa9.84□□□□□ -0.83
GTF2F1-201ENST00000394456 CFC1P0CG37 223 aa9.84□□□□□ -0.83
GTF2F1-201ENST00000394456 ZNF418Q8TF45 676 aaPredicted RBP9.84□□□□□ -0.83
GTF2F1-201ENST00000394456 IGHV3-38A0A0C4DH36 116 aa9.84□□□□□ -0.84
GTF2F1-201ENST00000394456 A0A1W2PRX2 142 aa9.84□□□□□ -0.84
GTF2F1-201ENST00000394456 F8W1H4 67 aa9.84□□□□□ -0.84
GTF2F1-201ENST00000394456 ZNF22P17026 224 aaPredicted RBP9.84□□□□□ -0.84
GTF2F1-201ENST00000394456 HERVK_113P61574 105 aa9.84□□□□□ -0.84
GTF2F1-201ENST00000394456 NDUFA11Q86Y39 141 aa9.84□□□□□ -0.84
GTF2F1-201ENST00000394456 ANK3Q12955 4377 aaKnown RBP9.83□□□□□ -0.84
GTF2F1-201ENST00000394456 NSUN5P1Q3KNT7 163 aa9.83□□□□□ -0.84
GTF2F1-201ENST00000394456 C4orf3Q8WVX3 66 aa9.83□□□□□ -0.84
GTF2F1-201ENST00000394456 DLX4Q92988 240 aaPredicted RBP9.83□□□□□ -0.84
GTF2F1-201ENST00000394456 TRAV8-3A0A0A6YYJ7 113 aa9.83□□□□□ -0.84
GTF2F1-201ENST00000394456 TMEM86BQ8N661 226 aa9.83□□□□□ -0.84
GTF2F1-201ENST00000394456 SETXQ7Z333 2677 aaKnown RBP9.82□□□□□ -0.84
GTF2F1-201ENST00000394456 TMEM223A0PJW6 202 aa9.82□□□□□ -0.84
GTF2F1-201ENST00000394456 H3BMM0 161 aa9.82□□□□□ -0.84
GTF2F1-201ENST00000394456 H7C2G1 150 aa9.82□□□□□ -0.84
GTF2F1-201ENST00000394456 I3L3M4 83 aa9.82□□□□□ -0.84
GTF2F1-201ENST00000394456 CD28P10747 220 aa9.82□□□□□ -0.84
GTF2F1-201ENST00000394456 SPXQ9BT56 116 aa9.82□□□□□ -0.84
GTF2F1-201ENST00000394456 SLC25A29Q8N8R3 303 aa9.82□□□□□ -0.84
GTF2F1-201ENST00000394456 RAX2Q96IS3 184 aa9.82□□□□□ -0.84
GTF2F1-201ENST00000394456 TRAV2A0A0B4J234 112 aa9.81□□□□□ -0.84
GTF2F1-201ENST00000394456 LGALS3P17931 250 aaKnown RBP9.81□□□□□ -0.84
GTF2F1-201ENST00000394456 C10orf126Q8N4M7 172 aa9.81□□□□□ -0.84
GTF2F1-201ENST00000394456 HIVEP2P31629 2446 aa9.81□□□□□ -0.84
GTF2F1-201ENST00000394456 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.81□□□□□ -0.84
GTF2F1-201ENST00000394456 IGKV2-29A2NJV5 120 aaPredicted RBP9.81□□□□□ -0.84
GTF2F1-201ENST00000394456 NFE4Q86UQ8 179 aa9.81□□□□□ -0.84
GTF2F1-201ENST00000394456 RHODO00212 210 aa9.8□□□□□ -0.84
GTF2F1-201ENST00000394456 TCL1BO95988 128 aa9.8□□□□□ -0.84
GTF2F1-201ENST00000394456 SMAGPQ0VAQ4 97 aa9.8□□□□□ -0.84
GTF2F1-201ENST00000394456 RHOHQ15669 191 aa9.8□□□□□ -0.84
GTF2F1-201ENST00000394456 TEX29Q8N6K0 151 aa9.8□□□□□ -0.84
GTF2F1-201ENST00000394456 SMR3AQ99954 134 aa9.8□□□□□ -0.84
GTF2F1-201ENST00000394456 A4D1N5 150 aa9.8□□□□□ -0.84
GTF2F1-201ENST00000394456 AZU1P20160 251 aa9.8□□□□□ -0.84
GTF2F1-201ENST00000394456 PAPPA-AS1Q5QFB9 102 aa9.8□□□□□ -0.84
GTF2F1-201ENST00000394456 VCX2Q9H322 139 aa9.8□□□□□ -0.84
GTF2F1-201ENST00000394456 TRGV11A0A075B6L2 103 aa9.79□□□□□ -0.84
GTF2F1-201ENST00000394456 TMEM238C9JI98 176 aa9.79□□□□□ -0.84
GTF2F1-201ENST00000394456 CFAP126Q5VTH2 177 aa9.79□□□□□ -0.84
GTF2F1-201ENST00000394456 PEMTQ9UBM1 199 aa9.79□□□□□ -0.84
GTF2F1-201ENST00000394456 TMEM238LA0A1B0GVL6 79 aa9.79□□□□□ -0.84
GTF2F1-201ENST00000394456 A6NJY4 79 aa9.79□□□□□ -0.84
GTF2F1-201ENST00000394456 DYNLRB2Q8TF09 96 aa9.79□□□□□ -0.84
GTF2F1-201ENST00000394456 GAGE12HA6NDE8 117 aa9.78□□□□□ -0.84
GTF2F1-201ENST00000394456 UBE2D3P61077 147 aa9.78□□□□□ -0.84
GTF2F1-201ENST00000394456 UBE2D2P62837 147 aa9.78□□□□□ -0.84
GTF2F1-201ENST00000394456 MUSTN1Q8IVN3 82 aa9.78□□□□□ -0.84
GTF2F1-201ENST00000394456 IGHV3OR16-12A0A075B7B8 117 aa9.78□□□□□ -0.84
GTF2F1-201ENST00000394456 NPC2P61916 151 aa9.78□□□□□ -0.84
GTF2F1-201ENST00000394456 MAP6D1Q9H9H5 199 aa9.78□□□□□ -0.84
GTF2F1-201ENST00000394456 LEPROTO15243 131 aa9.77□□□□□ -0.84
GTF2F1-201ENST00000394456 FHL3Q13643 280 aa9.77□□□□□ -0.84
GTF2F1-201ENST00000394456 LINC01587Q99440 93 aa9.77□□□□□ -0.85
GTF2F1-201ENST00000394456 XCL2Q9UBD3 114 aa9.77□□□□□ -0.85
GTF2F1-201ENST00000394456 IGHV3-30-3P0DP02 117 aa9.76□□□□□ -0.85
GTF2F1-201ENST00000394456 LINC00467Q9BRT7 94 aa9.76□□□□□ -0.85
GTF2F1-201ENST00000394456 CITED2Q99967 270 aaPredicted RBP9.76□□□□□ -0.85
GTF2F1-201ENST00000394456 CHCHD7Q9BUK0 85 aa9.76□□□□□ -0.85
GTF2F1-201ENST00000394456 TNFRSF18Q9Y5U5 241 aa9.76□□□□□ -0.85
GTF2F1-201ENST00000394456 OTOGQ6ZRI0 2925 aa9.76□□□□□ -0.85
GTF2F1-201ENST00000394456 FLNBO75369 2602 aaKnown RBP9.76□□□□□ -0.85
GTF2F1-201ENST00000394456 SPINK8P0C7L1 97 aa9.76□□□□□ -0.85
GTF2F1-201ENST00000394456 ADAMTSL4-AS1Q5T5F5 129 aa9.76□□□□□ -0.85
GTF2F1-201ENST00000394456 Q6ZUT4 128 aa9.76□□□□□ -0.85
GTF2F1-201ENST00000394456 DEFB114Q30KQ6 69 aa9.75□□□□□ -0.85
GTF2F1-201ENST00000394456 C11orf72Q8NBR9 251 aa9.75□□□□□ -0.85
GTF2F1-201ENST00000394456 LINC01006Q8NI28 216 aa9.75□□□□□ -0.85
GTF2F1-201ENST00000394456 CARD19Q96LW7 228 aa9.75□□□□□ -0.85
GTF2F1-201ENST00000394456 A0A0J9YXY3 114 aa9.75□□□□□ -0.85
GTF2F1-201ENST00000394456 M0R2P5 195 aa9.75□□□□□ -0.85
GTF2F1-201ENST00000394456 PRO1854Q9UHT4 67 aa9.75□□□□□ -0.85
GTF2F1-201ENST00000394456 CCL24O00175 119 aa9.74□□□□□ -0.85
GTF2F1-201ENST00000394456 SCGB1C2P0DMR2 95 aa9.74□□□□□ -0.85
GTF2F1-201ENST00000394456 FOXI1Q12951 378 aa9.74□□□□□ -0.85
GTF2F1-201ENST00000394456 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.74□□□□□ -0.85
GTF2F1-201ENST00000394456 NDUFA7O95182 113 aa9.73□□□□□ -0.85
GTF2F1-201ENST00000394456 IGHV3-53P01767 116 aa9.73□□□□□ -0.85
GTF2F1-201ENST00000394456 DAND5Q8N907 189 aa9.73□□□□□ -0.85
GTF2F1-201ENST00000394456 TMEM263Q8WUH6 116 aaKnown RBP9.73□□□□□ -0.85
GTF2F1-201ENST00000394456 SIGMAR1Q99720 223 aa9.73□□□□□ -0.85
GTF2F1-201ENST00000394456 LITAFQ99732 161 aa9.73□□□□□ -0.85
GTF2F1-201ENST00000394456 IGHV3-33P01772 117 aa9.73□□□□□ -0.85
GTF2F1-201ENST00000394456 RNASE1P07998 156 aaKnown RBP9.73□□□□□ -0.85
GTF2F1-201ENST00000394456 ODF3L2Q3SX64 289 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms