RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 CRYBA4P53673 196 aa14.29□□□□□ -0.12
HDDC3-202ENST00000394272 GAGE1Q13065 139 aa14.29□□□□□ -0.12
HDDC3-202ENST00000394272 GAGE4Q13068 117 aa14.29□□□□□ -0.12
HDDC3-202ENST00000394272 GAGE5Q13069 117 aa14.29□□□□□ -0.12
HDDC3-202ENST00000394272 GAGE13Q4V321 117 aa14.29□□□□□ -0.12
HDDC3-202ENST00000394272 PET117Q6UWS5 81 aa14.29□□□□□ -0.12
HDDC3-202ENST00000394272 SPATA25Q9BR10 227 aa14.29□□□□□ -0.12
HDDC3-202ENST00000394272 CYSLTR1Q9Y271 337 aa14.29□□□□□ -0.12
HDDC3-202ENST00000394272 ATP5LO75964 103 aa14.28□□□□□ -0.12
HDDC3-202ENST00000394272 LINC00694P0DN24 101 aa14.28□□□□□ -0.12
HDDC3-202ENST00000394272 DAZ4Q86SG3 579 aaKnown RBP14.28□□□□□ -0.12
HDDC3-202ENST00000394272 DAZ3Q9NR90 486 aaKnown RBP14.28□□□□□ -0.12
HDDC3-202ENST00000394272 PRO0255Q9UI72 69 aa14.28□□□□□ -0.12
HDDC3-202ENST00000394272 LINC01549A6NIU2 74 aa14.27□□□□□ -0.12
HDDC3-202ENST00000394272 ATP5G1P05496 136 aa14.27□□□□□ -0.12
HDDC3-202ENST00000394272 C20orf203Q8NBC4 194 aa14.27□□□□□ -0.12
HDDC3-202ENST00000394272 RPL39P62891 51 aaKnown RBP14.27□□□□□ -0.13
HDDC3-202ENST00000394272 MRAPQ8TCY5 172 aa14.27□□□□□ -0.13
HDDC3-202ENST00000394272 COTL1Q14019 142 aa14.26□□□□□ -0.13
HDDC3-202ENST00000394272 SCGB3A1Q96QR1 104 aa14.26□□□□□ -0.13
HDDC3-202ENST00000394272 C12orf74Q32Q52 190 aa14.25□□□□□ -0.13
HDDC3-202ENST00000394272 LINC01545Q5VT33 79 aa14.25□□□□□ -0.13
HDDC3-202ENST00000394272 CHCHD7Q9BUK0 85 aa14.25□□□□□ -0.13
HDDC3-202ENST00000394272 H0Y8G0 127 aa14.25□□□□□ -0.13
HDDC3-202ENST00000394272 S100A12P80511 92 aa14.25□□□□□ -0.13
HDDC3-202ENST00000394272 TEX43Q6ZNM6 134 aa14.25□□□□□ -0.13
HDDC3-202ENST00000394272 ERASQ7Z444 233 aa14.25□□□□□ -0.13
HDDC3-202ENST00000394272 ZMAT4Q9H898 229 aa14.25□□□□□ -0.13
HDDC3-202ENST00000394272 A0A0J9YWU9 116 aa14.24□□□□□ -0.13
HDDC3-202ENST00000394272 IGIPA6NJ69 53 aa14.24□□□□□ -0.13
HDDC3-202ENST00000394272 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.24□□□□□ -0.13
HDDC3-202ENST00000394272 C20orf202A1L168 122 aa14.23□□□□□ -0.13
HDDC3-202ENST00000394272 GYPEP15421 78 aa14.22□□□□□ -0.13
HDDC3-202ENST00000394272 LGALS9CQ6DKI2 356 aa14.22□□□□□ -0.13
HDDC3-202ENST00000394272 NTM-AS1Q6ZSK4 140 aa14.22□□□□□ -0.13
HDDC3-202ENST00000394272 VSIG2Q96IQ7 327 aa14.22□□□□□ -0.13
HDDC3-202ENST00000394272 TIMM17AQ99595 171 aa14.22□□□□□ -0.13
HDDC3-202ENST00000394272 PAX4O43316 350 aa14.21□□□□□ -0.13
HDDC3-202ENST00000394272 F5H768 121 aa14.21□□□□□ -0.14
HDDC3-202ENST00000394272 PRSS1P07477 247 aa14.21□□□□□ -0.14
HDDC3-202ENST00000394272 GTSF1LQ9H1H1 148 aa14.21□□□□□ -0.14
HDDC3-202ENST00000394272 Q6ZN92 141 aa14.2□□□□□ -0.14
HDDC3-202ENST00000394272 TMEM141Q96I45 108 aa14.2□□□□□ -0.14
HDDC3-202ENST00000394272 PMCHL2Q9BQD1 86 aa14.2□□□□□ -0.14
HDDC3-202ENST00000394272 ODF1Q14990 250 aa14.19□□□□□ -0.14
HDDC3-202ENST00000394272 BAALCQ8WXS3 180 aa14.19□□□□□ -0.14
HDDC3-202ENST00000394272 TRAV26-1A0A087WT03 109 aa14.18□□□□□ -0.14
HDDC3-202ENST00000394272 ATOH7Q8N100 152 aa14.18□□□□□ -0.14
HDDC3-202ENST00000394272 A0A0J9YY99 117 aa14.18□□□□□ -0.14
HDDC3-202ENST00000394272 HTN3P15516 51 aa14.18□□□□□ -0.14
HDDC3-202ENST00000394272 PYGO1Q9Y3Y4 419 aa14.18□□□□□ -0.14
HDDC3-202ENST00000394272 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.17□□□□□ -0.14
HDDC3-202ENST00000394272 TRAV12-1A0A0B4J245 112 aa14.17□□□□□ -0.14
HDDC3-202ENST00000394272 IGKV2-29A2NJV5 120 aaPredicted RBP14.17□□□□□ -0.14
HDDC3-202ENST00000394272 Q6ZTC4 211 aa14.17□□□□□ -0.14
HDDC3-202ENST00000394272 A0A087WX48 190 aa14.16□□□□□ -0.14
HDDC3-202ENST00000394272 ATP6V0E2Q8NHE4 81 aa14.16□□□□□ -0.14
HDDC3-202ENST00000394272 C11orf45Q8TAV5 145 aa14.16□□□□□ -0.14
HDDC3-202ENST00000394272 B9D2Q9BPU9 175 aa14.16□□□□□ -0.14
HDDC3-202ENST00000394272 UBE2D4Q9Y2X8 147 aa14.16□□□□□ -0.14
HDDC3-202ENST00000394272 ZNF664Q8N3J9 261 aa14.15□□□□□ -0.14
HDDC3-202ENST00000394272 FAM104AQ969W3 186 aa14.15□□□□□ -0.14
HDDC3-202ENST00000394272 OPRPNQ99935 248 aaPredicted RBP14.14□□□□□ -0.15
HDDC3-202ENST00000394272 VAMP8Q9BV40 100 aa14.14□□□□□ -0.15
HDDC3-202ENST00000394272 SPANXA1Q9NS26 97 aa14.14□□□□□ -0.15
HDDC3-202ENST00000394272 IGLV4-3A0A075B6K6 122 aa14.14□□□□□ -0.15
HDDC3-202ENST00000394272 TRBV6-8A0A0A6YYG3 113 aa14.14□□□□□ -0.15
HDDC3-202ENST00000394272 NANOS2P60321 138 aaKnown RBP14.14□□□□□ -0.15
HDDC3-202ENST00000394272 TMEM97Q5BJF2 176 aa14.14□□□□□ -0.15
HDDC3-202ENST00000394272 TRBV25-1A0A075B6N4 114 aa14.13□□□□□ -0.15
HDDC3-202ENST00000394272 PRSS29PA6NIE9 313 aa14.13□□□□□ -0.15
HDDC3-202ENST00000394272 NPSP0C0P6 89 aa14.13□□□□□ -0.15
HDDC3-202ENST00000394272 MAJINQ3KP22 176 aa14.13□□□□□ -0.15
HDDC3-202ENST00000394272 CEMP1Q6PRD7 247 aaPredicted RBP14.13□□□□□ -0.15
HDDC3-202ENST00000394272 MRPL35Q9NZE8 188 aaKnown RBP14.13□□□□□ -0.15
HDDC3-202ENST00000394272 TRAV9-2A0A087WT02 112 aa14.12□□□□□ -0.15
HDDC3-202ENST00000394272 PMVKQ15126 192 aa14.12□□□□□ -0.15
HDDC3-202ENST00000394272 TMEM243Q9BU79 118 aa14.12□□□□□ -0.15
HDDC3-202ENST00000394272 TIMM21Q9BVV7 248 aa14.12□□□□□ -0.15
HDDC3-202ENST00000394272 PAM16Q9Y3D7 125 aa14.12□□□□□ -0.15
HDDC3-202ENST00000394272 PRKDCP78527 4128 aaKnown RBP14.12□□□□□ -0.15
HDDC3-202ENST00000394272 ZC2HC1BQ5TFG8 222 aa14.12□□□□□ -0.15
HDDC3-202ENST00000394272 F8VRH5 84 aa14.11□□□□□ -0.15
HDDC3-202ENST00000394272 CST9LQ9H4G1 147 aa14.11□□□□□ -0.15
HDDC3-202ENST00000394272 COL7A1Q02388 2944 aa14.11□□□□□ -0.15
HDDC3-202ENST00000394272 A0A096LPF7 62 aa14.1□□□□□ -0.15
HDDC3-202ENST00000394272 MRPL23Q16540 153 aaKnown RBP14.1□□□□□ -0.15
HDDC3-202ENST00000394272 MRPL52Q86TS9 123 aaKnown RBP14.1□□□□□ -0.15
HDDC3-202ENST00000394272 CHTOPQ9Y3Y2 248 aaKnown RBP14.1□□□□□ -0.15
HDDC3-202ENST00000394272 H3BNG1 76 aa14.1□□□□□ -0.15
HDDC3-202ENST00000394272 H7C423 109 aa14.1□□□□□ -0.15
HDDC3-202ENST00000394272 AMELXQ99217 191 aa14.1□□□□□ -0.15
HDDC3-202ENST00000394272 ICOSQ9Y6W8 199 aa14.1□□□□□ -0.15
HDDC3-202ENST00000394272 hDV102S1A0JD36 115 aa14.09□□□□□ -0.15
HDDC3-202ENST00000394272 LINC00587B1AMM8 73 aa14.09□□□□□ -0.15
HDDC3-202ENST00000394272 DPM2O94777 84 aa14.09□□□□□ -0.15
HDDC3-202ENST00000394272 IGKCP01834 107 aa14.09□□□□□ -0.15
HDDC3-202ENST00000394272 FGF6P10767 208 aa14.09□□□□□ -0.15
HDDC3-202ENST00000394272 PAPPA-AS1Q5QFB9 102 aa14.09□□□□□ -0.15
HDDC3-202ENST00000394272 CSDC2Q9Y534 153 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms