RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 B4DSR2 109 aa7.42□□□□□ -1.22
PSEN1-204ENST00000394164 HTN1P15515 57 aa7.42□□□□□ -1.22
PSEN1-204ENST00000394164 C19orf54Q5BKX5 351 aa7.42□□□□□ -1.22
PSEN1-204ENST00000394164 BBC3Q96PG8 261 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-204ENST00000394164 ZNF256Q9Y2P7 627 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-204ENST00000394164 U3KQE9 123 aa7.42□□□□□ -1.22
PSEN1-204ENST00000394164 NACAE9PAV3 2078 aa7.42□□□□□ -1.22
PSEN1-204ENST00000394164 APCP25054 2843 aa7.42□□□□□ -1.22
PSEN1-204ENST00000394164 A0A087WWL8 130 aa7.41□□□□□ -1.22
PSEN1-204ENST00000394164 PMVKQ15126 192 aa7.41□□□□□ -1.22
PSEN1-204ENST00000394164 MDFICQ9P1T7 246 aa7.41□□□□□ -1.22
PSEN1-204ENST00000394164 ITPR3Q14573 2671 aa7.41□□□□□ -1.22
PSEN1-204ENST00000394164 NDUFA4O00483 81 aa7.41□□□□□ -1.22
PSEN1-204ENST00000394164 C9orf153Q5TBE3 101 aa7.41□□□□□ -1.22
PSEN1-204ENST00000394164 C9orf47Q6ZRZ4 202 aa7.41□□□□□ -1.22
PSEN1-204ENST00000394164 DPH3P1Q9H4G8 78 aa7.41□□□□□ -1.22
PSEN1-204ENST00000394164 TRBV10-2A0A0K0K1G8 114 aa7.41□□□□□ -1.22
PSEN1-204ENST00000394164 RBAKDNA6NC62 111 aa7.41□□□□□ -1.22
PSEN1-204ENST00000394164 C9orf139Q6ZV77 190 aa7.41□□□□□ -1.22
PSEN1-204ENST00000394164 ZFAND2AQ8N6M9 145 aa7.41□□□□□ -1.22
PSEN1-204ENST00000394164 AMELXQ99217 191 aa7.41□□□□□ -1.22
PSEN1-204ENST00000394164 TRAV8-3A0A0A6YYJ7 113 aa7.4□□□□□ -1.22
PSEN1-204ENST00000394164 TRAV12-3A0A0B4J271 114 aa7.4□□□□□ -1.22
PSEN1-204ENST00000394164 H7C423 109 aa7.4□□□□□ -1.22
PSEN1-204ENST00000394164 DEFB136Q30KP8 78 aa7.4□□□□□ -1.22
PSEN1-204ENST00000394164 FAM74A4Q5TZK3 123 aa7.4□□□□□ -1.22
PSEN1-204ENST00000394164 Q6Q795 121 aa7.4□□□□□ -1.22
PSEN1-204ENST00000394164 CSDC2Q9Y534 153 aaKnown RBP7.4□□□□□ -1.22
PSEN1-204ENST00000394164 MUC4Q99102 2169 aa7.4□□□□□ -1.22
PSEN1-204ENST00000394164 SYNJ2BPP57105 145 aa7.4□□□□□ -1.23
PSEN1-204ENST00000394164 TMEM190Q8WZ59 177 aa7.39□□□□□ -1.23
PSEN1-204ENST00000394164 DAZ1Q9NQZ3 744 aaKnown RBP7.39□□□□□ -1.23
PSEN1-204ENST00000394164 KHDC1LQ5JSQ8 128 aa7.39□□□□□ -1.23
PSEN1-204ENST00000394164 RS1O15537 224 aa7.38□□□□□ -1.23
PSEN1-204ENST00000394164 USMG5Q96IX5 58 aa7.38□□□□□ -1.23
PSEN1-204ENST00000394164 IGIPA6NJ69 53 aa7.38□□□□□ -1.23
PSEN1-204ENST00000394164 SPXQ9BT56 116 aa7.38□□□□□ -1.23
PSEN1-204ENST00000394164 TRAV21A0A0B4J279 112 aa7.38□□□□□ -1.23
PSEN1-204ENST00000394164 SOCS3O14543 225 aa7.38□□□□□ -1.23
PSEN1-204ENST00000394164 P0DMU3 169 aa7.38□□□□□ -1.23
PSEN1-204ENST00000394164 FAM231AP0DMU4 169 aa7.38□□□□□ -1.23
PSEN1-204ENST00000394164 FAM231CP0DMU5 169 aa7.38□□□□□ -1.23
PSEN1-204ENST00000394164 RNASE13Q5GAN3 156 aaKnown RBP7.38□□□□□ -1.23
PSEN1-204ENST00000394164 HIST2H2BCQ6DN03 193 aa7.38□□□□□ -1.23
PSEN1-204ENST00000394164 C18orf65Q6ZTR6 163 aa7.38□□□□□ -1.23
PSEN1-204ENST00000394164 C11orf44Q8N8P7 122 aa7.38□□□□□ -1.23
PSEN1-204ENST00000394164 KLK9Q9UKQ9 250 aa7.38□□□□□ -1.23
PSEN1-204ENST00000394164 UBR5O95071 2799 aaPredicted RBP7.37□□□□□ -1.23
PSEN1-204ENST00000394164 A0A0J9YXV3 536 aa7.37□□□□□ -1.23
PSEN1-204ENST00000394164 A8MZ25 164 aa7.37□□□□□ -1.23
PSEN1-204ENST00000394164 PRM2P04554 102 aa7.37□□□□□ -1.23
PSEN1-204ENST00000394164 RPL13AP40429 203 aaKnown RBP7.37□□□□□ -1.23
PSEN1-204ENST00000394164 DAND5Q8N907 189 aa7.37□□□□□ -1.23
PSEN1-204ENST00000394164 LINC00477Q96M19 166 aa7.37□□□□□ -1.23
PSEN1-204ENST00000394164 EDA2RQ9HAV5 297 aa7.37□□□□□ -1.23
PSEN1-204ENST00000394164 ICOSQ9Y6W8 199 aa7.37□□□□□ -1.23
PSEN1-204ENST00000394164 ITPR2Q14571 2701 aa7.37□□□□□ -1.23
PSEN1-204ENST00000394164 TMEM126AQ9H061 195 aa7.37□□□□□ -1.23
PSEN1-204ENST00000394164 IGHV4-4A0A075B6R2 117 aa7.36□□□□□ -1.23
PSEN1-204ENST00000394164 OVOL1O14753 267 aa7.36□□□□□ -1.23
PSEN1-204ENST00000394164 IGLV1-40P01703 118 aa7.36□□□□□ -1.23
PSEN1-204ENST00000394164 HERVK_113P63121 156 aa7.36□□□□□ -1.23
PSEN1-204ENST00000394164 A0A0B4J2C4 111 aa7.36□□□□□ -1.23
PSEN1-204ENST00000394164 SPINK13Q1W4C9 94 aa7.36□□□□□ -1.23
PSEN1-204ENST00000394164 PAPPA-AS1Q5QFB9 102 aa7.36□□□□□ -1.23
PSEN1-204ENST00000394164 LINC01356Q8N9X3 169 aa7.36□□□□□ -1.23
PSEN1-204ENST00000394164 SDHAF1A6NFY7 115 aa7.35□□□□□ -1.23
PSEN1-204ENST00000394164 KLK9Q2XQG4 91 aa7.35□□□□□ -1.23
PSEN1-204ENST00000394164 SUMO4Q6EEV6 95 aa7.35□□□□□ -1.23
PSEN1-204ENST00000394164 TMEM101Q96IK0 257 aa7.35□□□□□ -1.23
PSEN1-204ENST00000394164 RNASE3P12724 160 aaKnown RBP7.35□□□□□ -1.23
PSEN1-204ENST00000394164 ZNF876PQ49A33 203 aa7.35□□□□□ -1.23
PSEN1-204ENST00000394164 ADAMTSL4-AS1Q5T5F5 129 aa7.35□□□□□ -1.23
PSEN1-204ENST00000394164 MRPL53Q96EL3 112 aaKnown RBP7.35□□□□□ -1.23
PSEN1-204ENST00000394164 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.35□□□□□ -1.23
PSEN1-204ENST00000394164 A0A0J9YXY3 114 aa7.35□□□□□ -1.23
PSEN1-204ENST00000394164 A0A0U1RRA0 63 aa7.35□□□□□ -1.23
PSEN1-204ENST00000394164 FAM19A5Q7Z5A7 132 aaPredicted RBP7.35□□□□□ -1.23
PSEN1-204ENST00000394164 TENM4Q6N022 2769 aa7.34□□□□□ -1.23
PSEN1-204ENST00000394164 HELZ2Q9BYK8 2649 aaKnown RBP7.34□□□□□ -1.23
PSEN1-204ENST00000394164 IGHV4OR15-8A0A075B7B6 117 aa7.34□□□□□ -1.23
PSEN1-204ENST00000394164 A0A087WW49 117 aa7.34□□□□□ -1.23
PSEN1-204ENST00000394164 M0R2P5 195 aa7.34□□□□□ -1.23
PSEN1-204ENST00000394164 NDUFA7O95182 113 aa7.34□□□□□ -1.23
PSEN1-204ENST00000394164 PSMB8P28062 276 aa7.34□□□□□ -1.23
PSEN1-204ENST00000394164 IGHV3-73A0A0B4J1V6 119 aa7.34□□□□□ -1.23
PSEN1-204ENST00000394164 TMEM223A0PJW6 202 aa7.34□□□□□ -1.23
PSEN1-204ENST00000394164 LEPROTO15243 131 aa7.34□□□□□ -1.23
PSEN1-204ENST00000394164 SMCR5Q8TEV8 140 aa7.34□□□□□ -1.23
PSEN1-204ENST00000394164 AKAP9Q99996 3911 aa7.34□□□□□ -1.24
PSEN1-204ENST00000394164 DCANP1Q8TF63 244 aa7.33□□□□□ -1.24
PSEN1-204ENST00000394164 TRBV30A0A0K0K1B3 111 aa7.33□□□□□ -1.24
PSEN1-204ENST00000394164 I3L3M4 83 aa7.33□□□□□ -1.24
PSEN1-204ENST00000394164 COX6CP09669 75 aa7.33□□□□□ -1.24
PSEN1-204ENST00000394164 SLURP1P55000 103 aa7.33□□□□□ -1.24
PSEN1-204ENST00000394164 CFHR3Q02985 330 aa7.33□□□□□ -1.24
PSEN1-204ENST00000394164 C3orf22Q8N5N4 141 aa7.33□□□□□ -1.24
PSEN1-204ENST00000394164 DNAJC30Q96LL9 226 aa7.33□□□□□ -1.24
PSEN1-204ENST00000394164 SMIM9A6NGZ8 99 aa7.32□□□□□ -1.24
PSEN1-204ENST00000394164 KNCNA6PVL3 124 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms